KEGG   Ooceraea biroi (clonal raider ant): 105280751
Entry
105280751         CDS       T05778                                 
Name
(RefSeq) nuclear pore complex protein Nup50
  KO
K14295  nuclear pore complex protein Nup50
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105280751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105280751
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105280751
SSDB
Motif
Pfam: NUP50 Ran_BP1 Nucleoporin_FG Tra1_central
Other DBs
NCBI-GeneID: 105280751
NCBI-ProteinID: XP_011339819
Position
4:complement(3475518..3478682)
AA seq 530 aa
MAGKRSAATELNHDNWDEENEPEEAGTFTKASTDVLEKRVIKTGRRRLPSRDGANMKSAF
GTFTGFKTSNSVMKSSPFSFLANVITPSSTTTSIAPTTIVNTNNKSVESGSASKAENASK
TDNDNAKAQTLSGTSASKKGLSEQGNEKTKSHSSEYYAKLKGLNESVTTWIKTHVDANPF
CILTPIFKDYEKYLKEIKEESAKVQASHTAEQTTQATPDRKNDSKKDASVEKKSEGSSFA
SSKALTSCIDTRPLIAAEWKPEKQMFPNLTTSAKSIFGNTEPKTEAPKSVFGNADVTPDK
GRSIFGNIESNVARKSVFGNTTPDKNPFLRKPTVPDGVKTEEEETKPDVKPVAPTFPAST
FSFGQSSTTSNATAGFSFGSAKPFSFAPQAVKPQDSEDKADNEKDEEDEEPPKPDFKPIT
EEGAIYEQRCKVFVKKDASFSDRGVGTLYLKPTPNGKMQLIVRADTALGNLLLNTLLTPS
IPTKRMNKNSIMLVCLPMPDSTPPPIPVLLRVKTSQGADDLFETLNEHKK
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcaggcaaacggtctgcggcaacagaactgaatcacgataactgggacgaggagaat
gaaccggaagaggctggtacatttactaaagcatcgactgatgtacttgagaaaagagtt
ataaaaacaggtagacgtcggttaccatcaagggatggtgccaacatgaaaagtgcattc
gggacatttacaggtttcaaaacctccaattctgtaatgaagtcatccccattcagtttt
ttagctaatgtaattaccccttccagtacgactacttccattgccccaacaacgattgta
aatactaacaacaagagcgttgagagcggcagtgcttctaaagccgagaatgcaagtaaa
accgataacgataacgcgaaagcacaaacgctatcaggcacgagtgcgagcaagaagggt
ttgagcgagcaaggaaacgagaagaccaagagtcactcgtcagaatattacgcgaagctg
aagggattgaacgagagcgtgacgacgtggataaaaacccacgtggacgcgaatccattc
tgtatattaacacctatattcaaggattatgagaagtacttgaaagagattaaagaagag
agtgcgaaggtgcaagcctcgcacaccgcggaacagacgacgcaggctacgcctgatcga
aaaaacgacagcaagaaggacgcgagcgtggagaagaaatcggaaggttcttcctttgcc
agttcaaaggcgcttacgagctgcattgacacgcgtccactgatagccgcagaatggaaa
cccgaaaagcagatgttccccaatcttactactagtgccaagtccatatttggcaacacg
gaaccgaaaacggaagctcctaaatccgtattcggcaatgccgacgtgactcctgacaag
ggcaggtccattttcggaaacatagagtcgaacgttgctcgtaagagtgtattcggcaat
acaaccccggacaagaaccccttcttacgcaaacccacagtcccggacggcgtgaagacg
gaagaggaggaaacgaaacccgatgtgaagcctgttgcgcctactttcccagcttcgacc
ttcagtttcggacagagttccactaccagcaacgcgactgctggatttagtttcggcagc
gcgaaaccattctcgttcgcgcctcaagcagtgaaaccgcaagattccgaggacaaagct
gacaacgaaaaggacgaggaggatgaggaaccaccgaagccagattttaaaccgattact
gaggaaggtgcgatttacgagcagaggtgtaaagtcttcgtgaagaaagacgccagtttt
agcgacaggggcgtcggaacgttgtatctaaaaccgacaccgaatgggaaaatgcaatta
atagtacgcgcggacactgctctgggtaatttgttgcttaatactctgttgactccaagc
atcccgaccaagcgcatgaacaagaactcgatcatgttggtctgtctgccaatgccggat
tccacaccgcccccgatcccagtgctgttgagagtgaaaaccagccagggggcagacgac
ctgtttgaaacactgaacgaacataaaaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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