KEGG   Oceanicola sp. D3: FHY55_01440
Entry
FHY55_01440       CDS       T06139                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
ocd  Oceanicola sp. D3
Pathway
ocd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FHY55_01440 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocd03400]
    FHY55_01440 (mutS)
DNA repair and recombination proteins [BR:ocd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     FHY55_01440 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29
Other DBs
NCBI-ProteinID: QDC11464
UniProt: A0A5B8BZM1
Position
278182..280797
AA seq 871 aa
MMAQYLEIKADQPGALLFYRMGDFYEMFFDDAVAAAAALDIALTKRGKHGGEDIPMCGVP
VHAAESYLLTLIRKGFRVAVCEQMESPEEAKKRGYKSVVRREVVRLVTPGTLTEESLLEP
RRHNFLAAYADVRGEGALAWVDISTGAFRVVPCGREMLGPQLARLTPREVLVSERAEAFQ
AEIVSDLGAAATYASAESFDSESGRARLCEALGVKTLDAFGSFGRAELSAMGAIVAYLEL
TQKGQLPLLRPPVAEDMGGVMQIDAATRRNLELTRSLSGGRDGSLIAAIDRTLTAGGGRL
LERRVSSPSRKLSEVHRRLDTVEWALDAGLRARLRDALRRVPDMDRALSRLALDRGGPRD
LAAIRNGLTQAEILAGSLDGEVPDLIAEAAQALRGHDELTDLLDAALVAEPPLLARDGGF
IASGYDAELDEVRTLRDEGRGVIARMQAEFVEQTGIAALKVKHNNVLGYFIETTATHADK
MLKPPLSEVFIHRQTTANAIRFTTVELSELETRILNAAGRVLEIEKRLYSALKEAVLDAS
AAVGAAARALSELDLCCALADLASGEGWVRPAVDDGRAFDVEGGRHPVVEAALRREGGQA
FVANDCGLSDGAEGAHIWLLTGPNMAGKSTFLRQNALIALLAQAGSFVPARRAHIGIVSS
LFSRVGAADDLARGRSTFMVEMVETAAILNQADDRSLVILDEIGRGTATYDGLSIAWAVM
EHLHDVNEARALFATHYHEMTALSAKLKGAENATVAVKEWEGDVIFLHEVRMGAAEASYG
VQVAKLAGLPEAVVTRARMVLEQLEKGEREGGDKARLIDDLPLFAAMPKQASPPPKVESD
ELKQKLAGVLPDELTPKEALDVIYELKRLAE
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgatggcgcaatacctggagatcaaggcagatcaaccgggtgcgctgctgttttaccgg
atgggcgacttctatgagatgttcttcgacgacgcggtggcggccgcggcggcgctggat
attgccctgaccaaacggggaaagcatggcggcgaagacattccgatgtgcggggtgcca
gtgcatgcggcagagagctacctgctgaccctcattcgcaaaggctttcgggtggccgtt
tgtgagcagatggaaagcccggaagaggcaaagaagcgcggctacaaatccgtggtgcgg
cgcgaggtggtgcggctggtgacgccgggcacgctgaccgaggaaagcctgcttgagcca
cgccgccacaactttctggcggcctatgccgatgtgaggggcgagggcgcgctggcgtgg
gtggatatctccaccggggccttccgcgttgtgccttgcgggcgcgagatgctggggcct
cagctggcgcggctgacaccgcgagaggtgcttgtaagcgagcgcgcagaggcgtttcag
gctgaaatagtctctgatttgggcgctgcggccacctatgcatccgctgagagctttgac
agtgaaagcggcagggcccggctgtgcgaggcgcttggggtaaagacgctggatgcgttt
ggaagcttcgggcgtgccgagctttcagcgatgggtgcgatcgtggcctatttggagttg
acccagaaaggccaactgccgcttctgcgcccgccggtggccgaggacatgggcggggtg
atgcagattgacgctgcgacccgcagaaaccttgagctgacccgcagcctgagcggaggc
cgggacggcagcctgattgcagcgattgatcggacgctgacggcgggcggcgggcggcta
cttgagcggcgcgtatcctcgccatcacggaagctctccgaggtgcatcgcaggctcgac
accgtggaatgggcactggatgccgggctgcgggcacggctgcgggatgcgctgcggcgg
gtgccggatatggaccgcgcactctcgcggctggcactcgaccggggcggaccccgggac
ttggcggccattcgcaacgggctgacccaggccgagatcctcgcgggttcgctggatgga
gaagtgccagaccttattgcggaagccgcgcaggcgctgcgggggcatgatgaactgacc
gacctgctggacgctgcgcttgtagccgaacctccgctcttggcgcgggatggcgggttt
atcgcctccggatacgatgccgagttggacgaggtgcgcacgctgcgtgacgaagggcgt
ggggtgattgcacggatgcaggccgagtttgtggagcagacgggcattgccgcgctgaag
gtgaagcacaacaatgtgctgggctatttcatcgaaaccacggcgacccatgccgacaag
atgttgaagccacccctctcggaggttttcattcatcggcagaccacggccaatgccatt
cgctttaccacggttgagctgagcgagttggagacacggattttgaatgcggcgggtcgt
gttctggaaattgaaaaacgtctctattccgccttgaaagaggccgtgttggacgcatcc
gctgctgttggcgcggccgcacgggcgctatctgagctggatctttgctgcgcgctggct
gaccttgccagcggtgagggctgggtgcggccggcggtggatgatggccgggccttcgac
gtggagggcggtcggcatccggttgtcgaggcggcgttgaggcgcgagggcgggcaggcg
tttgtagccaatgattgcgggctgtcggatggtgccgagggagcgcatatctggttgctc
accgggccgaacatggcaggtaagtcgacctttttgcgacagaacgcgctgattgcgctg
ttggcacaggcgggcagctttgtgccggcacggcgcgcgcatatcgggatcgtttcgagc
ctgttttcccgcgttggtgcggcagatgaccttgcccgggggcggtcgaccttcatggtg
gagatggtggaaactgccgcgattttgaatcaggcggacgaccggagccttgttatcctc
gatgagatcgggcgcggcacggccacttatgacgggctgtcgattgcctgggcagtgatg
gaacaccttcatgacgtcaacgaagcgcgtgcgctgtttgccacccactaccatgagatg
acggcgctgagtgccaaactcaaaggggccgagaacgcgacagtcgccgttaaggaatgg
gagggagatgtgatctttctccatgaggtgcggatgggcgcggcggaagcgagctatggc
gtgcaggtcgccaagctggccggtctgcccgaggccgtggtgacgcgcgcgcggatggtt
ttggagcagctggagaagggcgagcgtgaagggggcgacaaggcacggctgattgacgat
ttgccgctctttgccgcaatgccgaaacaagcgtcgccgccgccaaaagttgagagcgat
gagctcaagcaaaagctcgccggcgtattgcctgacgagctaacgcccaaggaggcgctt
gacgttatttacgaattgaagcggctggcagagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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