KEGG   Oryctolagus cuniculus (rabbit): 100338890
Entry
100338890         CDS       T03373                                 
Name
(RefSeq) DNA helicase B isoform X1
  KO
K15254  DNA helicase B [EC:5.6.2.3]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100338890
Enzymes [BR:ocu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     100338890
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    100338890
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 UvrD_C_2 AAA_11 CbiA nSTAND3 RsgA_GTPase NB-ARC AAA_22 AAA_16 AAA_23 VapE-like_dom KAP_NTPase ParA ABC_tran
Other DBs
NCBI-GeneID: 100338890
NCBI-ProteinID: XP_002711363
Ensembl: ENSOCUG00000005909
UniProt: G1SPX9
Position
4:52715217..52788911
AA seq 1092 aa
MGCSGVWVESAQVGMARSDEHLRELQGPLLPSKDLEEEDDDFLQEDAQEDEDAGFVDAEE
LCSGGLKAGSLPGRLHVVIPDENTQEKCKVFGRFPIMGPWWRVKVQVKPVKSRNYHAQGF
PSYFLQTDMSPPNQKHICSLFLKECEASRDEIDKFLNWVNKESNYEHLNFKNLREKLRTF
QRETGRKDKKQSVQNEQEEALPGCEMSLPVENADHFIYVMTALQFPKIMEFLPVLLPRHF
KQLISSRSDEVLAKIEDILGTHPWKLGFSKVTYRELRLLQCEASWTAFCQCKPLLQLMTD
LEKNALIIYSKLKQICREHGHTCVEEADLTLELSEHMSFHDVWQSLKFLKDIHVVTYEKG
CVFLYDLYQAERGIASSVCDLMERPPWHLRVDVKKVLASIQNTKSEDSSSEDAVNESKPD
DRRLESSVDVLDTQDSEDRIGNNGEDETNTDTRDVRLDQDQVAALEMICSKAVTVISGKG
GCGKTTIVSRLFKYIEQLEEREIKNACEDFEQDQDVPEEWITFTKESQREADKAIEVLLT
APTGKATGLLRQKTGLPAYTLYQVNYSFYLWDKKIVSKNEPWKFSSVRVLVVDEGSLVSV
GIFKSVLKLLCEHSKLAKLIILGDIRQLPSIEPGNLLKDLFETLKSRHCAIELKTNHRAE
SQLIVDNATRISRRQFPNFDAEVNITDNPAVPISIQDKTFIFVKLPEEDGSSQLSKNNHH
SYLYSAVRTLLQESDFKSAQTSQFIAFRRQDCDLVNDCCCKHYTGHLTKDHQNRLIFGVG
DKICCTRNAYLSDLLPENTSKSQKNSDLEPKDEEFCGTPHDGAKNKNDFDSGIRLCNGEI
FFITNDVTDVTMVKRRFLTINNMAGLEVTVDFKKLMKYCHIKHAWARTIHTFQGSEEHTV
VYVVGKAGRQHWQHVYTAVTRGRCRVYVIAEESQLQGAIRRNNVVRKTRLKHFLQNELSS
SPETPAGSPPHWKSSGGHGGCKTQPAASRLPLHRANGETSDITRSRASLADYRMFAFDGR
RELPSFEEADTDEHLLQSRGSKRSCGVNGDESPSKVLMVDQSSPQVSSRLQNLKLNNLNP
RQLFKPRDNQET
NT seq 3279 nt   +upstreamnt  +downstreamnt
atggggtgttccggagtttgggttgagagcgcacaggtgggtatggccagatctgatgag
cacctgcgggaactgcagggacctctgctcccgtccaaggacctggaggaggaagacgat
gactttctacaggaggacgcgcaggaagatgaagacgcagggtttgtggacgccgaggag
ctctgcagcgggggcctgaaggctggcagcctgcctgggcgcctccatgttgtaattcct
gatgaaaacactcaagagaaatgtaaagtgtttggacgctttccgattatgggcccgtgg
tggcgagtgaaggtgcaggtgaagcctgttaaatcaaggaactatcatgctcagggattc
ccatcttattttttacagactgacatgtcaccaccaaatcaaaaacacatctgttccctc
tttcttaaagagtgtgaagcctccagggatgagatagataagtttctgaactgggtaaat
aaagaatcaaattatgaacacctaaacttcaaaaatcttagggaaaaactaagaactttc
caaagggaaactggaaggaaagataaaaaacagtctgtacagaatgaacaagaagaggca
ttgccaggttgtgagatgagtcttcctgtggaaaatgcagatcactttatatatgtaatg
acagctttgcagtttccaaaaataatggaattccttccagttctcctgcctcgtcatttt
aaacagctcataagctcacgttctgacgaagtgttggctaagatagaagatattttaggt
acacatccatggaagcttggatttagtaaagtaacctacagagaattgagacttctgcaa
tgtgaggcaagttggacggcgttttgtcagtgtaagcctcttctccagttgatgactgat
ttggagaagaatgcattgataatatattctaagctgaagcagatatgtcgagaacatggg
cacacatgtgttgaagaagctgacttgactttggaattgtcagagcacatgtctttccat
gatgtctggcagtctctgaagtttttgaaggatattcacgtggtgacctatgagaagggc
tgtgtctttctttatgacctttaccaggccgaaaggggcattgcctcttcagtgtgcgac
ctgatggagagacccccgtggcatttacgtgtcgatgtcaagaaggtgcttgcgtctatt
cagaacacgaagtctgaggattcaagcagtgaagatgcagtgaatgaaagcaaacctgat
gacagaagactagaaagttctgtggatgtgctcgatacacaggacagtgaggaccgtatt
gggaataatggtgaagatgaaactaatacagacacaagggatgtgcgtctggatcaggat
caggtggctgctttggaaatgatttgctccaaagctgtgacagtcataagtgggaaaggt
ggctgtgggaagaccacaattgtcagccgtctttttaagtatatagagcagttggaagaa
agagaaataaaaaatgcttgtgaagattttgagcaagatcaggatgtcccagaagagtgg
attacgtttactaaggaaagtcagcgagaggcagacaaggctatagaagttttgctcaca
gcacccacaggaaaagcaactggcttactcagacagaaaactggtcttcctgcttatacc
ctgtatcaggtcaattatagcttctatttatgggacaaaaagattgtgtccaagaatgag
ccatggaaattttcttctgttagagttcttgttgtggatgaagggagtttggtatctgta
ggaatcttcaaatcagttttgaaattattgtgtgagcactccaaacttgctaagcttata
atccttggtgatattagacaattacccagtattgaacctggtaacttgctgaaagatctt
tttgagactcttaagtcaagacattgtgctattgagctaaaaacaaaccacagagcagaa
tctcagctaattgtggataatgctacaaggatctcaaggcgccaatttccaaattttgat
gcagaagtaaatattactgataatccagcagtccccatctcaattcaagacaagacattt
atttttgtcaaactcccagaagaagatggcagttctcagttatctaaaaataatcatcat
tcttatttatattctgcagttagaaccttattgcaagaaagtgactttaaaagtgcacag
acatcacaatttattgcatttagaaggcaagactgtgaccttgtcaacgattgctgctgc
aagcactacactggccacctgaccaaagaccatcagaatagactcatatttggagttggt
gataaaatttgttgtaccaggaatgcatatctctcagacttactcccagaaaatacctct
aaaagtcaaaaaaatagtgatttggagcccaaggatgaagaattttgtggtactcctcat
gatggtgctaaaaataagaatgactttgacagtggtattcggctctgtaatggagaaata
tttttcataacaaatgatgtaactgatgtgactatggtgaagaggagatttttaaccatt
aataatatggctggcttggaagtaactgtggattttaaaaaattaatgaaatattgtcac
ataaaacatgcatgggcaagaactattcacacttttcaggggtctgaggagcacacggtt
gtgtatgtagtggggaaggcgggccgtcagcactggcagcatgtctacactgcggtgacg
aggggccgttgccgagtgtacgtcatcgcagaagagtcacagctccagggtgccatcagg
agaaacaacgttgtcaggaaaacacgtttgaaacatttcttgcaaaatgagctctccagt
agccctgagactccagcaggttctccaccccattggaagagctctggaggtcatggaggt
tgcaagacacagccggcagcatctcgcctccctctgcacagggccaatggggagacaagt
gatatcaccaggagcagggcctctttggctgactacaggatgtttgcctttgatggaaga
agagaattaccttcatttgaggaagcagatacagatgagcatttattacagtcacgggga
tccaaaagaagctgtggtgtaaatggtgacgaaagcccaagcaaagttcttatggtggat
caatcatctccacaagtgtcttccagacttcagaatttgaaactaaataatttaaacccc
aggcaacttttcaaacccagagataatcaagaaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (62)   

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