KEGG   Oryctolagus cuniculus (rabbit): 100356568
Entry
100356568         CDS       T03373                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04115  p53 signaling pathway
ocu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100356568 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    100356568 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100356568 (COP1)
Enzymes [BR:ocu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100356568 (COP1)
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100356568 (COP1)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100356568 (COP1)
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 WD40_like zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 100356568
NCBI-ProteinID: XP_008262031
Ensembl: ENSOCUG00000005463
Position
13:complement(3444677..3654411)
AA seq 734 aa
MSSSRQAGSGSAGTSPGSSAASSVTSASSSLASSPSPPAAAAAAAAALGSGGAAQAAGSG
GLGGPARPVLVAAAVSGGGGGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLLA
PLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLAN
VNLMLELLAQKKKQLEAESHAAQLQILMEFLKVARRNKKEQLEQIQKELSVLEEDIKRVE
EMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYISTLASRR
KRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDL
YNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCIS
WSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAK
VKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKG
HRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIAC
GSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLI
AANSQGTIKVLELV
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgtccagcagccgccaggccggctccggctccgcggggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttagcctcttccccgtcgccccctgccgcg
gcggcggcggcggcggcggcgctggggtccggcggggccgcgcaggccgcgggctcgggc
ggcctcgggggtccggcgcggcctgtgctggtggcggccgccgtgtcgggcggcggcggc
ggcggcggggcggtgtcggcgggcctgtcccggctcagctgcgcggccaggcccagcgcc
ggcgtaggaggcagcagctccagcctcggcagcggcagcaggaagcgacccctgctcgcc
cctctctgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgcccc
atctgctttgatatgattgaggaagcatacatgacaaaatgtggccacagcttttgctac
aagtgtattcatcagagtttggaggacaataacagatgtcccaagtgtaactatgttgtg
gacaatattgaccatctctatcctaatttcctggtgaatgagctcattctgaaacagaag
caaagatttgaggaaaagaggttcaaattggaccactcagtgagtagtaccaatggccac
aggtggcaaatatttcaagatttgttgggaactgaccaagataaccttgatttggccaat
gtcaacctcatgttggagttattagcacaaaaaaagaaacagttggaagcagaatcacat
gcagcccaactacagatccttatggagtttctcaaggttgcaaggaggaataagaaagag
caactggaacagatccagaaggaactgagtgttttggaagaggatattaaaagagtggaa
gaaatgagcggcttgtactctcctgtcagtgaggacagcactgtgcctcaatttgaagct
ccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggtttc
agtggcagttctcagacaaagaaacagccttggtatatcagcacattagcttcaagacga
aaacgactcactgctcattttgaagacctagagcagtgttatttttctacaaggatgtct
cgtatctcagatgacagtcgaactgcaagccaactggatgaatttcaggaatgcttatcc
aagtttactcgatataattcagtacgacctttggccacgttgtcatatgctagtgatctc
tataatggctccagcatagtctctagtattgaatttgaccgggattgtgactattttgca
attgctggggttacaaagaaaattaaagtctatgaatatggcacagtcatccaggatgca
gtggacattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagt
tggagtagttaccataagaatctgttagctagcagtgattatgaaggcactgttatccta
tgggatggatttacaggacagaggtcaaaagtctatcaggaacatgagaagcgatgttgg
agtgttgacttcaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaa
gtgaagctgtggtctaccaatctagataactcagtggcaagcattgaggcaaaggctaat
gtatgctgtgttaaatttagcccctcttccagataccatttggctttcggctgtgcagat
cactgtgtccactactatgatcttcgtaacactaaacaaccaatcatggtattcaaagga
caccgaaaggctgtctcttacgcaaagtttgtgagtggtgaagaaattgtctctgcctca
acagatagccagctaaaactgtggaatgtagggaaaccatactgtctacgttccttcaag
ggtcatatcaatgaaaaaaactttgtaggcctcgcttccaatggagattatatcgcttgt
ggaagtgaaaacaactccctctacctgtactacaaaggactttctaagactttgctaact
tttaagtttgatacagtcaaaagtgttctggacaaagaccggaaagaagatgatacaaat
gaatttgttagcgctgtttgctggagagcattgccagatggggagtccaatgtgctgatt
gctgctaacagtcagggtacaattaaggtgctagagttggtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (50)   

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