KEGG   Oryzias latipes (Japanese medaka): 101166446
Entry
101166446         CDS       T02443                                 
Symbol
eif3b
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
  KO
K03253  translation initiation factor 3 subunit B
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101166446 (eif3b)
   03012 Translation factors [BR:ola03012]
    101166446 (eif3b)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101166446 (eif3b)
Translation factors [BR:ola03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    101166446 (eif3b)
SSDB
Motif
Pfam: eIF2A RRM_1 Nup35_RRM
Other DBs
NCBI-GeneID: 101166446
NCBI-ProteinID: XP_004066017
UniProt: H2LYA2 A0A3P9KTR8
Position
1:21376846..21383675
AA seq 681 aa
MRNTVDMVDDPEYEEEEEPSFSDPEDFVDDVEDEELLEDILREKPQETDGIDSVVVVDNV
PQVGPERLEKLKNVIHKIFSKFGKITTEFYPEADGTTKGYIFLEYSSPNQALEAVKNADG
YKLDKQHTFRVNLFTDFDKYMNISDEWDPPAKQPFKDFGNMRHWIEDPDCRDQYSVIYEA
GERTAIFANDAKEPILAEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFS
HQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWS
HDGKFFARMTQDTLSIYETPSMGLLDKKSLKINGIKDFSWSPGDNIIAFWVPEDKDIPAR
VTLMQMPSRQEIRVRNLFNVVDCKLHWQRNGDYLCVKVDRTPKGTQGVVTNFEIFRMREK
QVPVDVVEMKESIIAFAWEPNGSKFAVLHGESPRINASFYHVKNNGKIELIKMFDKQQAN
SIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRYVVTSVSW
WSHKVDNAYWVWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSADQIKMIKKDLKKYSKTFE
QKDRLSQSKASKELVDKRRTMLEDYRRYREEALKNYQEQKSMRLELRGGVDTDELDSNVD
DWEEETIEFFCDEKIIALDDL
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcgaaatacagttgatatggtggacgacccagagtatgaggaggaggaggagccttcc
ttcagcgacccggaggacttcgtagatgatgtcgaggatgaggagctccttgaagacatc
ttgcgtgagaagcctcaggaaacggacggcatagactctgtggtggtggtggacaacgtt
cctcaggtggggccggagcggctggagaaactcaagaacgtcattcacaagatcttctcc
aagttcggcaagatcacaactgaattttatcccgaagctgatggcacgaccaaaggatac
atcttcttggaatattcctctcctaaccaggccttggaggcggtgaaaaatgcggatgga
tacaaacttgacaaacagcatacattcagggtcaacctcttcactgactttgacaagtac
atgaacatcagtgatgagtgggaccctccagcaaagcagcccttcaaagactttgggaat
atgcgtcactggatagaggatccagactgtcgtgaccagtacagtgtgatctacgaggct
ggagagaggactgccattttcgcaaatgacgccaaagagccaattctggctgaagaaagg
gcgcgttggacagagacctacgttcgatggtctcctaaaggcacctacctggccaccttt
caccaacgtggcattgcattgtggggcggtgagaagttcaagcagattcagagattcagc
caccagggcgtgtccctcatcgacttctcaccatgtgagaggtatgttgtgaccttcagt
cccttgatggacactaaggaggaccctcaggccatcatcatctgggacattctgactgga
cagaagaagagaggcttccactgcgagagctcagcacactggccaatattcaagtggagc
cacgacgggaagttttttgctagaatgactcaagacactttgagcatctatgaaactcca
tcaatgggtttgctggacaagaagagtctgaagattaatgggatcaaggacttctcgtgg
tctcctggtgacaacatcatagctttctgggtacccgaggacaaggacatcccggcaaga
gtgactctgatgcagatgccttcccgtcaggagatccgggtccgtaacctcttcaatgtt
gtcgactgcaaactgcactggcagagaaacggggattatctgtgtgtgaaggtggacaga
acgcccaaagggactcagggtgttgtgaccaactttgaaatcttcagaatgagggagaag
caggttcctgttgatgtggtggagatgaaggaaagcatcatagcctttgcctgggagcca
aacggcagcaagtttgccgttctgcatggagagtctccaaggatcaacgcctctttctat
cacgtcaaaaacaacggcaaaattgagctcatcaagatgtttgacaagcagcaggccaac
agcattttctggagtcctcagggtcagtttatggtgctggcaggtctcaggagcatgaat
ggagctcttgcctttgtagacacatccgactgtaccatgatgaacatagcagagcactac
atggcttcagatgtggagtgggacccaactggtcgctacgtcgtcacatccgtctcctgg
tggagccacaaggtggacaatgcatactgggtgtggacattccagggtcgactccttcag
aaaaacaacaaggaccgcttctgccagctactgtggagaccccgacctcccactctgctg
agtgcagatcagatcaagatgatcaagaaggatctgaagaaatactcaaagacctttgag
cagaaagatcgtctgagtcagtctaaggcttcaaaggaactggtggacaagcgaagaacc
atgcttgaagactaccgtcgctaccgagaggaagccctcaagaactatcaggaacagaag
agcatgcgcctggagctcagaggaggagtggacacggacgagctggacagcaatgtggat
gactgggaggaggagaccattgagtttttttgcgacgaaaaaatcattgccctcgacgat
ctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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