KEGG   Oreochromis niloticus (Nile tilapia): 100705199
Entry
100705199         CDS       T06104                                 
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03013  Nucleocytoplasmic transport
onl03015  mRNA surveillance pathway
onl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100705199 (eif4a3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100705199 (eif4a3)
   03015 mRNA surveillance pathway
    100705199 (eif4a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100705199 (eif4a3)
   03041 Spliceosome [BR:onl03041]
    100705199 (eif4a3)
   03009 Ribosome biogenesis [BR:onl03009]
    100705199 (eif4a3)
   03012 Translation factors [BR:onl03012]
    100705199 (eif4a3)
Enzymes [BR:onl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100705199 (eif4a3)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100705199 (eif4a3)
   mRNA cycle factors
    Stress granule specific factors
     100705199 (eif4a3)
Spliceosome [BR:onl03041]
 Complex C
  Other components
   EJC/TREX
    100705199 (eif4a3)
Ribosome biogenesis [BR:onl03009]
 Eukaryotic type
  90S particles
   Helicases
    100705199 (eif4a3)
Translation factors [BR:onl03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100705199 (eif4a3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD TniB
Other DBs
NCBI-GeneID: 100705199
NCBI-ProteinID: XP_003459823
Ensembl: ENSONIG00000019828
UniProt: A0A669BXT2
Position
LG6:41941607..41951251
AA seq 406 aa
MAATGAQGRKRILKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggctgccaccggggctcagggtaggaagaggatcctgaaggaggaagatatgaccaag
gtggagttcgagaccagcgaggaggtggacgtcacccctaccttcgacaccatgggtctc
cgggaggaccttctccgcgggatctacgcctacggatttgagaagccgtcagcgatccag
cagcgagccatcaagcagatcatcaaaggccgggatgtcatcgctcagtctcagtctgga
acgggaaagaccgccaccttctgcgtttctgtgctgcagtgtctcgacatccaggtgagg
gagacgcaggctctgatcctcgctccgactcgagagctcgccggacagattcagaaggtg
ctgctcgctctgggagactacatgaacgtgcagtgtcacgcctgcatcggcggcaccaac
gtcggcgaggacatacgcaagcttgactacggccagcacgtcgtggcgggcactcccgga
cgagtgttcgacatgattcggcgccgcagcctgagaacgagagccatcaagatgctggtc
ctggacgaggccgacgagatgctcaacaaaggtttcaaggagcagatctacgacgtgtac
cgctacctgcctcctgccacgcaggtggtcctgatcagtgccacgctgccgcacgagatc
ctggagatgaccaacaagttcatgaccgacccgatccgcatcctcgtcaaacgtgatgag
ttgaccttggaggggataaagcagttctttgttgccgtggagagggaggagtggaagttc
gacacgctgtgtgacctttatgacacgctgaccatcacgcaggccgtcatcttctgcaac
accaaaaggaaggtggactggctgacagagaagatgagggaggccaacttcacggtgtca
tcgatgcacggagacatgccgcagaaggagagagagtccatcatgaaggagttcagatca
ggagccagtcgtgtgctgatctccaccgatgtctgggctcggggcctggatgttcctcag
gtttcgctcatcatcaactacgacctgcccaacaacagagagctctacatccacaggatt
ggccggtcggggcgttatgggcgtaagggtgtggccatcaactttgtgaagaatgacgac
atccgcatcctgcgagacatcgagcagtattactccacccagatcgatgagatgcccatg
aacgttgctgatttgatctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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