KEGG   Oreochromis niloticus (Nile tilapia): 100708374
Entry
100708374         CDS       T06104                                 
Symbol
nup98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100708374 (nup98)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onl03019]
    100708374 (nup98)
   03036 Chromosome and associated proteins [BR:onl03036]
    100708374 (nup98)
Messenger RNA biogenesis [BR:onl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100708374 (nup98)
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100708374 (nup98)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS Nucleoporin_FG
Other DBs
NCBI-GeneID: 100708374
NCBI-ProteinID: XP_013131401
Ensembl: ENSONIG00000007458
Position
LG10:complement(32138445..32161234)
AA seq 1866 aa
MFNKSFGTPFGGGTGGFGTSSTFGQQNTGFGTTGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTGTGTTGGLFSQQNNAFGAKQATSFG
SFGTSTSSGGLFGSTNTTSNPFGGATSLFGGSGFSATQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGTGSLFGQATATSSAAT
GLFGSSAPNTSFSFSQNKSTFGGPTTGGFGATTGGLFSQQNQQQAGSLFKPFGQTTTTQS
TGFSFGNTNTIGQANTSSMGLFGNTAASQSGGLFGSAQTSAATGFGTATGLFGQTNTGFG
NVGTQSLFGNKTAGFGTTTTSAPSFGPTTSLFGNKPTLTLGPGTNTSSFGFNANPAGGGL
FGNKSTTGALGTGLGTSFGTAVGPGQTLFGNTQNKLGTALGTMGTFGTTGFNSGTSTLGF
GATQPVALTDPNAAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTA
QKALTTPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFVPRKSIKKL
VLKNLNNSQYSSPLNKESDDLASPSEYPQNGHSHVEEEEEQLRRVAGPGRRADDDPEVTQ
FYVNPIAKPIPQGRAHASLQDTIGDLNMHKGSRNGLEVRTRTHVAASPSVSSLPENNRHD
DIVRISDDDPAVELSNDDVSASFGEESLQEEREEEQQLSQQSPHPAGIVLNRVGYYTIPS
MDELADMVDENGECIVENFTIGRKGYGSIFFPGEVNVSGLNLDEIVHFRRKEVIVYPDDK
SKPPEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLSDMNYEGRLEKASRKQGARFLEY
RPETGSWVFEVAHFSKYGLQDSDEDEDVPAKADTKKLKTLTTLPPSRLQQQQLPPSQQQV
APQAQSTAVMELQGGAIELDSDMADITQSFPTESMLGGEEDSDLLAGETDTTISKLGGLA
SSELDGVSASGHIASTLGINPHTLQIMKASLFAEDDDDTDMFHDHAAMKVSTDVSSPRLV
LPATQGRPSVGGLLQARFTSGLSQLSDSPRPLLPPSRPSPASVEAPRSLQWAGPGPSPFM
LPSRTPEPSIRTVGVRRLGGPVPLKESITHGKGGLLMDTGLFAVRSFRVGWGPGWTLAHC
GSRLSSPTSKQVEHQELAAKTDFSFLPKPARSKPLTESPYKVVVEQVVGLEPLRGKTFEE
EEDEESQAVLQRPLEICLKHSIVEVSDGSACPAVRPQPGVAALHEYAEWIAELNDRRGDT
ESLLGYWAEVWTLCEALWGRLGPSDQEPKAPGEYEQQLERRRSFSAWLSRGASRRVEEEV
ALAGKDRHVNAVFSYLTGNRISEACRLAQKEGDHRLSLLLSQAVGSQYCRDLLALQLADW
HCMQTDCYLPEERLRIFALLAGKPVWQSTDSAVNVCAELDWKRCVAVHLWFMLPPTASVA
DALARYEAAFQGSCEAGKYACAPLPPYLEAEQPDLEEEESKRPLYDLCFHLLKLYSDRHY
GLQQLLEPLAVTWERLDYRLSWHLWGVLQALHYTHLSAPRQGLLHASYAAQLESAGLWHM
AIFILLHIPEHTQRERAVREMLVLHCPLQETEESVRRERFLTEQLLIPEQWIHEAKATRA
HRDGDRHQQALHLYXARYWNQCHRLLIQHLASDCIINDNHDYLLEFLEGLALPEHCATIQ
DWDTAGRVYLDYIRVIKTLQDIQQMENAGYELERLYTDVTSLCSRIELLPCHTAKDRLAQ
SEMAKRVANILRAVLSLQQGDTADSLSIPLAQLAPHISRLPMPEDYTLEELRGLTQSYLR
QLIVSQ
NT seq 5601 nt   +upstreamnt  +downstreamnt
atgttcaacaaatcatttgggactcccttcggtggtgggacgggaggatttggcacctcg
tccacgttcggtcagcaaaacacgggcttcgggacgacgggaggcttcggcacgtctgcg
tttggggcgacgacaaacaccgggggactatttggatccacgcagaataaaccgggtggg
ctctttgggtccagcacattcagccagccagcgacttcctccaccagcaccggcttcggt
ttcggcgcagcgagcggcacctccaccagcctgtttggcaacactggcacgggcaccacc
ggcggactcttctcccagcagaacaatgcttttggcgccaagcaagccacctcgtttgga
agcttcgggacgagcaccagcagcggcggcctcttcggctccaccaacaccacctccaac
ccgttcggcggggctacgtccctgtttggaggttcggggttctccgccactcagcagccg
ggaacgactgtgaagttcaaccctccgacaggaagtgacacaatggtgaaggcgggcgtg
acgacgagcatcaatacgaagcaccagtgcatcacggccatgaaggagtacgagaacaag
tctctggaggagttgaggctggaggactaccaggcgggcaggaaaggcccgaccaacccg
atggcgccgggaaccggcagtcttttcggccaggccacggccacgtccagtgccgccacc
ggcctcttcggatcctctgctcccaacaccagcttctcctttagccagaacaagagcacc
ttcggagggccaactaccggcggtttcggtgcgaccacaggcggcctgttcagtcagcag
aaccagcagcaggccggcagcctcttcaagccctttggtcagaccaccaccacccagagc
accggcttctccttcggcaacaccaacacgataggacaggccaacaccagcagcatgggt
ttgtttgggaacacggcggcgtctcagtcgggcggcttgttcggctctgctcagaccagc
gccgccactggtttcgggacagccacgggcctgttcggccaaaccaacactggatttggg
aacgtcggcactcagagtttattcggtaacaagacagccgggttcggcaccaccaccacc
agcgccccgtcctttggccccaccaccagcctttttgggaacaagcccaccctcacgctg
ggacccggaaccaacacttccagcttcggttttaatgccaaccctgctggaggaggactg
tttgggaacaagtccaccaccggagcgctggggactggactgggaaccagcttcggtaca
gcagtcggccccgggcagaccctgtttggcaacacccagaacaaactgggcaccgcgctg
ggaacgatggggacgttcggaacaaccggattcaacagtggaacgagcaccctgggattc
ggagcgacgcagcccgtcgccctcacagatcccaacgcagcggctgcccagcaggccatg
ctccagcagcagctcagtgtgctggcgtactcgccgtacggagactcaccgctcttcaga
aacccactctcagaccccaagaagaaggaggagcgcctgaaaccaaccaatccgacagcc
caaaaggctctgaccacgcccactcattacaagctgaccccgcgtcctgcgaccagggtg
cgacccaaagctctgacgtcttccggaggctccaagtcgcagctcttcgacggtctggat
gacgacgagccgtcgctcaccaacggagccttcgtgccgaggaagagcatcaagaagctc
gtcctgaagaacctgaacaacagtcagtacagcagtcctctgaacaaggagagcgacgac
ctcgcctcgccgtcagagtacccacagaacggacacagccacgtggaggaggaagaggag
cagctaaggagggtggcgggccctggcaggcgggccgacgacgacccggaggtcacccag
ttctacgtcaaccccatcgcaaagccgatcccgcagggccgcgcccatgccagcctgcag
gacaccatcggcgacctgaacatgcacaaaggctcgaggaacggcctcgaggtcagaacc
agaacacatgtcgccgcttccccaagcgtgtcatcgctaccagagaacaaccgccacgat
gacatagttaggatatcagacgatgatccagctgttgagctgagcaacgacgacgtgtct
gcgtccttcggcgaggagtctctgcaggaggagcgagaggaggagcagcagctgtcccag
cagtctcctcaccctgcaggcatcgttctgaaccgcgtgggttattacaccatcccctcc
atggacgagctcgccgacatggtggacgaaaacggggagtgcatcgtggagaacttcacc
atcggcaggaaaggttacggctccatcttcttccccggcgaggtgaacgtgtcgggactg
aacctcgacgaaatcgtccacttcagacgcaaagaggtcatcgtgtacccagacgacaag
agcaaaccgccggagggggaggggcttaacaggcgggcggaggtgactctggatggcgtt
tggccgaacgacaagacgacctgcacccagatcaggagccccgagcgtctgagcgacatg
aactacgagggccggctggagaaggcgtcgcgcaagcagggagctcgcttcctggagtac
cgacctgagaccgggtcctgggtgttcgaggtggctcacttctccaagtacggcctgcag
gactcggacgaagacgaggacgtcccggcgaaagccgacaccaagaagctgaagacgctg
acgactctccctccctcccggctgcagcagcaacagcttcccccctctcagcagcaggtg
gcgccacaggctcagtccaccgccgtcatggagctccagggtggcgccatcgagctggac
agtgacatggccgacatcacccagagcttcccgacagagagcatgctgggaggagaggaa
gacagcgacctgctggcgggggagacggacacgacgatctccaagcttgggggtctggcc
tcctcagagctcgacggcgtttctgcgtccggccacatagcgtctacgctggggatcaac
ccacacacgctccagatcatgaaggcgtctctgtttgctgaggacgacgatgacaccgac
atgttccacgatcacgcggcgatgaaggtttccacggatgtctcgtctcctcgcctcgtc
ctgccggccactcagggccgaccctctgtcggcggtctccttcaggctcgattcacctcg
ggcctctctcagctgtcagactctccccgtcctctccttcctccatcacggccgtctccg
gccagcgttgaagccccccgctctctgcagtgggcggggcctggcccgtcccccttcatg
ctgccctcccggactccggagccttcgattaggacggttggcgttcggcggctcggcggc
cccgtccccctcaaagagtcgatcactcacgggaagggaggtttgctcatggacaccggg
ctgtttgccgtgcgctccttccgggtcgggtggggtcctggctggacgctcgctcactgc
ggcagccggctgagctcgccgacgtccaaacaggtcgagcaccaagaactggcggcaaag
acagacttcagcttcctgccgaaacctgccaggagcaaaccactcacagaaagcccctac
aaggtggtggtggagcaggtggtgggtttggaacctctcagagggaaaacctttgaagaa
gaggaagatgaagagagccaggcggtgctacagcgccccctggagatctgcctgaagcac
agcatcgtggaggtctcagacggctccgcctgccctgcggtgcgaccgcagcccggcgtg
gcggcgctgcacgagtatgccgagtggatcgcggagctgaacgacagacggggcgacact
gagtcgctgctgggctactgggccgaggtctggactctgtgtgaggcgctgtggggccgg
ctgggcccctcggatcaggagcccaaggcgcccggcgagtatgagcagcagctggaaagg
aggcggagcttctcggcctggctgtcccgcggtgcctcccgcagggtggaggaggaggtg
gctttggccgggaaagatcgccacgtcaacgcggtcttcagttacctgacgggaaaccgc
atcagcgaggcgtgccgactcgcccagaaggaaggagaccaccgtctgtccctgctgctg
tctcaggccgtgggctctcagtactgcagggaccttctcgcccttcagctcgccgattgg
cactgcatgcagaccgactgctacctgcccgaggagcgactccgcatcttcgctctgctc
gccgggaaaccggtgtggcagtccaccgactctgcggtgaacgtgtgcgccgagctggac
tggaagcgctgcgtggccgtccacctctggttcatgctgccaccgactgcctctgtggcc
gacgccctcgccagatacgaagccgcctttcagggctcgtgtgaggccgggaagtacgcc
tgtgcccccctgcctccatacctggaggcggagcagccagatctggaggaggaggagtcc
aaacggccgctgtacgacctctgcttccacctgctcaaactttacagcgacagacactat
gggctgcagcagctgctggagcctctcgccgtcacctgggagcgcttggattaccgcctg
agctggcacctgtggggcgtcctgcaggcgctgcactacacccacctgagcgccccacgg
cagggcctcctccacgccagctacgccgcgcagctggagagcgccggcctgtggcacatg
gccatcttcatcctgctgcacatccccgagcacactcagagggagcgagccgtgagggag
atgctggtgctgcactgccccctgcaggagacggaggagtcggtccgcagggagcgcttc
ctgaccgagcagctgcttatcccggagcagtggatccacgaggccaaggccacccgagcc
caccgcgacggcgacaggcaccagcaggccctgcacctgtacncggcccgatactggaac
cagtgccaccgcctgctgatccagcacctggcctcagactgcatcatcaacgataaccac
gactacctcctggagttcctggagggtctggcgctccccgagcactgcgccaccatccag
gactgggacacagcagggagggtttacctcgactacatcagagtcataaagactctgcag
gacatccagcagatggaaaacgccggctacgagctggagcgtctctacaccgacgtgacg
tctctctgcagcaggatcgagctcctgccctgccacaccgctaaagaccgcctcgcccaa
tcggaaatggcgaagcgcgtggcgaacatcctgcgtgcggtgctgagcctgcagcagggc
gatacggctgactccctcagcatcccgctcgcccagctggcgccgcacattagccgcctg
ccgatgcccgaggactacacgctggaggagctgcgaggcctcacgcagtcatacctgcga
cagctcatcgtcagccagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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