KEGG   Orcinus orca (killer whale): 101289092
Entry
101289092         CDS       T05247                                 
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04820  Cytoskeleton in muscle cells
oor04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101289092 (COL5A2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101289092 (COL5A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oor00536]
    101289092 (COL5A2)
Glycosaminoglycan binding proteins [BR:oor00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101289092 (COL5A2)
SSDB
Motif
Pfam: Collagen COLFI VWC TILa Amnionless
Other DBs
NCBI-GeneID: 101289092
NCBI-ProteinID: XP_004276974
Position
7:complement(75511100..75701051)
AA seq 1499 aa
MMANWVEARPLLILTILLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
ICVCDNGAILCDKIQCQDVLECADPVTPPGECCPVCPHTTGSSNTNFGRGRKGQKGEPGL
VPVVTGIRGRPGPSGPPGSQGPRGERGPKGKPGPRGPQGIDGEPGVPGQPGAPGPPGHPS
HPGPDGMNRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGTGPTGPPG
EPGDPGPMGPLGTRGPEGPPGKPGEDGEPGRNGKAGEVGFAGSPGARGFPGAPGLPGLKG
HRGHKGLEGPKGEVGAIGSKGEAGPTGPMGAMGPMGPRGMPGERGRLGPQGAPGQRGAHG
MPGKPGPMGPLGITGSAGFPGNPGLKGEAGPTGARGPEGPQGQRGETGLPGPVGSQGLPG
AVGTDGTPGAKGPTGSPGTSGPPGLAGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGEAG
PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKG
AQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG
PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG
LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG
EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTPGDTGPPGLQGMPGERGIAGTPGPKGDRG
GIGEKGSEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENG
PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG
TQGPPGATGFPGSAGRVGPPGPTGAPGPAGPLGEPGKEGPPGLPGDPGSHGRVGDRGPAG
PPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG
PTGAPGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG
SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLLGPQGPRGDKGDHGDRGDRG
QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPG
VRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDD
KNKTDPGVHATLKSLSSQIETMRSPDGSRKHPARTCDDLKLCYSAKQSGEYWIDPNQGSV
EDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFVYGDHQSP
NAAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNFKKAVVLKGSNDLEIKAEGNVR
FRYVVLHDTCSKRNGNVGKTIFEYRTQNVARLPIVDLAPVDVGSTDQEFGIEVGPVCFV
NT seq 4500 nt   +upstreamnt  +downstreamnt
atgatggcaaattgggtggaagcaagacctctcctcattcttactattttattagggcaa
tttgtctcaataaaagcccaggaagaagatgaggatgaaggatatggtgaagaaatagcc
tgcactcagaatggtcagatgtacttaaacagggacatttggaaacctgccccttgccag
atctgtgtctgtgacaatggcgccattctttgtgacaagatacagtgccaggatgtgctt
gaatgtgctgaccccgtaactccccctggggagtgctgtcctgtctgtccacatacaact
ggaagtagcaataccaattttggtagaggaagaaagggacaaaaaggagaaccaggacta
gtgcctgttgtaacaggcatacgtggacgtccaggaccctcaggacctccaggatcacaa
ggaccaagaggagagagaggcccaaaaggaaaacctggtcctcgtggtcctcagggaatc
gatggagaaccaggtgttcctggtcaaccgggtgccccaggacctcctggacatccatct
cacccaggacccgatggcatgaacaggccgttttcagctcagatggctgggttggatgaa
aagtctgggcttgggagtcaagtaggactgatgcctggctctgtgggtcctgttggccca
aggggacctcaaggtttacaaggacagcagggtggtactggccctacaggacctcctggt
gagcctggtgaccctggaccaatgggtccacttggtacacgtggaccagagggccctcct
ggaaaacctggtgaagatggtgagcctggtagaaatggaaaagctggtgaagttggattt
gcaggatctccgggagctcgaggatttcctggggctcctggtcttccaggcctgaagggt
caccgaggacacaaaggtcttgaaggccctaaaggtgaagttggagcaatcggttccaag
ggtgaagctggccctactggtccaatgggtgccatgggtccaatgggcccaagaggaatg
ccaggagagagagggagacttgggccacagggtgctcctggacaacgaggtgcacatggt
atgcctggaaaacctgggccaatgggtcctcttgggataactggttccgctggttttcca
ggaaatcctgggttgaagggagaagcaggtcccactggggcacgaggccctgaaggtcct
caggggcaaagaggtgaaactgggctaccgggtcctgttggctctcaaggtcttcctggt
gcagtgggaactgatggtacgcctggtgccaaaggcccaacaggttctccaggtacctct
ggtcctcctggcttagcagggccccctggatctccaggacctcagggtagcactggacct
ccaggaattcgaggccaaccgggtgatccaggagttccaggtttcaaaggagaagctggt
ccaaaaggggaaccggggccacatggtattcagggtccaataggcccacctggtgaagaa
ggcaaacgaggtccccgaggtgatccaggaacagttggtcctccaggccccatgggagaa
aggggtgctcctggcaatcgtggttttccaggctctgatggtttacctggaccaaagggg
gctcaaggagagaggggtcctgtaggttcttcaggacctaaaggaggtcagggggatcca
ggacgtccgggggaacctgggcttccaggtgctcggggtctgacaggaaatcctggtgtt
caaggtcctgaaggaaaacttggacctttgggtgctccaggagaggatggccggccaggt
cctccaggctccataggaatcagagggcagcctgggagtatgggtcttccaggccccaaa
ggtagcagtggtgaccctggaaaacctggagaagcaggaaatgctggtgttcctgggcag
aggggagctcctggaaaagatggtgaagttggtccttccggtcctgtgggccccccgggt
ctagctggggagagaggagaacagggccctccaggccccactggctttcaggggcttcct
ggtcctccagggcctcctggggaaggtggaaagccaggtgatcagggagttcctggagat
cctggagcagttggcccattaggacctagaggagaacgaggaaatccaggggaaagagga
gaaccaggaataaccggacttcctggtgagaagggaatggctggaggacacggtcctgat
ggtccaaaaggcagtccaggaccaactgggacccctggagatacaggcccaccaggtctt
caaggtatgccaggagaaagaggaattgcaggaactcctggccccaagggtgacagaggt
ggcataggagagaaaggttctgaaggtacagctggaaatgatggagcaagaggtcttccg
ggtcccttgggtcctcctggtcctgcaggtcctactggagaaaagggagaacctggccct
cgaggtttagttggcccacctggctcccgtgggaatcctggttctcgtggtgaaaatggc
ccaactggagccgttggttttgctggaccccagggtcctgatgggcagcctggagtaaaa
ggtgaacctggagagccaggacagaagggcgatgctggctctcctggaccacaaggtcta
gcaggatccccaggccctcatggtcctaatggcgttcctggactaaaaggtggtcgagga
actcagggtccacctggtgctacaggatttcctggttctgctggcagagttggacctcca
ggtcctactggagctccaggacctgcagggcccttaggggaacctgggaaggagggacct
ccaggtcttcctggggaccccggctctcacggacgagtaggagatcgaggaccagctggc
ccccctggtggcccaggagacaaaggggacccaggagaagatgggcaacctggtccagat
ggtccccctggtccagctggaactactgggcaaagaggaatcgtcggcatgccagggcag
cgtggagagcgagggatgcccggccttccaggcccagcaggcacaccaggaaaagtagga
ccaactggtgcaccaggagataaaggcccgcctggaccagtggggcccccaggctcaaat
ggccctgtgggagaaccaggacctgaaggtccagctggtaatgatggtactccaggacgg
gatggtgctgttggagaacgtggtgatcgtggagaccctgggcctgcaggtctgccaggc
tctcagggtgcccctggaactcccggtcccgttggtgccccaggagatgcaggacaaaga
ggagatccgggttctcggggtcctattggaccacctggtcgagctgggaaacgtggctta
cttggaccccaaggacctcgaggtgacaaaggtgatcatggagaccgaggtgaccgaggt
cagaagggtcacagaggctttactggtcttcaaggtcttcctgggcctcctggtcccaat
ggtgaacaaggcagtgctggaatcccaggaccatttggcccaagaggtcctccaggccca
gttggtccttcaggtaaagaaggaaaccctgggccacttgggcccatcgggcctcctggt
gtacgaggcagtgtcggagaagcaggccctgagggtcctcctggcgagcctggtccccct
ggccctccgggtccccctggccaccttacagctgctcttggggatatcatggggcactat
gatgagagcatgccagatccacttccagagtttactgaagatcaggcagctcctgatgac
aaaaacaaaacggacccaggggtgcatgctaccctgaagtcactcagtagtcagatcgaa
accatgcgcagccctgatggctctagaaagcacccagcccgaacttgtgatgacttaaag
ctttgctattctgcaaagcagagcggtgaatactggattgatcctaaccaaggatctgtt
gaagatgcaatcaaagtttactgcaacatggaaacaggagaaacatgtatttcagcaaac
ccatccagtgtaccacgtaaaacctggtgggccagcaaatctcctgataataagcctgtt
tggtatggtcttgatatgaatagaggatctcagtttgtttatggagaccaccagtcacct
aatgcagccattacacaaatgaccttcttgcgccttttatcgaaagaagcctcccagaac
attacttacatctgtaaaaacagtgtaggatacatggatgatcaagctaagaacttcaag
aaagctgtggttctcaaagggtcaaatgacttagaaatcaaagcagagggaaacgttaga
ttcagatatgtagttcttcatgatacttgctctaaacgaaatggaaatgtgggcaagacc
atctttgaatatagaacacagaatgtggcacgcttgcccattgtagatcttgcccctgtg
gatgtcggcagtacagaccaagaatttggcatcgaagttgggccagtttgttttgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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