KEGG   Orcinus orca (killer whale): 101290063
Entry
101290063         CDS       T05247                                 
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oor03009]
    101290063 (DDX55)
Enzymes [BR:oor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101290063 (DDX55)
Ribosome biogenesis [BR:oor03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    101290063 (DDX55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 AAA_22
Other DBs
NCBI-GeneID: 101290063
NCBI-ProteinID: XP_004276710
Position
15:83208541..83225055
AA seq 600 aa
MEHVTEGSWESLPVPLHPRVLGVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFIIPILEVLLRREEKLKKSQVGAIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGG
RNPGEDVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKVMCIH
GKMKYKRNKIFTEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMKVQKNTVDLLPKLKSMALADRAVFEK
GMKAFVSFVQAYAKHECNLIFRLKDLDFASLARGFGLLRMPKMPELRGKQFPDFVPVDVS
TDTIPFKDKIREKQRQKLLEQQRKEKTENEGRRKFIKNKAWSKQKAKKEKKKKRNEKRKR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEELEKGLLTSGTGSVKTADLGISDLEDDC
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagcacgtgacggagggctcctgggagtcgctcccggtgccgctgcacccgcgggtg
ctgggtgtcctgcgggagctgggtttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgttgctgcagaagcggtcacaggtagtggcaaaaca
ctcgctttcatcatccccatcctggaggttctcctgagaagggaagagaagttaaaaaag
agtcaggttggcgccataatcatcacacccacgcgagagctggctgttcagatagatgag
gtcctgtcgcatttcacgaagcccttcccacagttcagccagattctctggattggaggc
aggaatcctggagaggatgttgcgaggtttaaggaacacggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccgaaggaaggcagagggcctggatctggccagc
tgcgtgaggtccctggaggtcctggtgttggatgaagcggacaggcttctggatatgggg
ttcgaggcgagcataaacaccatcttggagtttttgccgaagcaaaggagaacgggcctc
ttctcggccactcagacacaagaagtggagaacctggtgagagcaggcctccggaaccct
gtgcgcatctcggtgaaggagaagggcgcggcggccagcagcacgcagaagaccccctcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaatcagctggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcagcacttgcgcctgcgtg
gaatactatggaaaggctctggaggccctggtgaagggcgtgaaggtaatgtgcattcac
ggaaagatgaaatataagcgcaataagatcttcacggagttccgcaaattgcaaagtggg
attttagtgtgcactgatgtgatggcccgaggaatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgccagtgccttcgtgcatcgctgtggccgcacagcc
cgcatcggccacggcggcagcgcgcttgtgtttctccttcccatggaagagtcgtacgtc
agtttccttgcaattaaccagaaatgccccctgcaggagatgaaagtccagaagaacaca
gtagacctccttccaaagctcaagtccatggccctggccgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcgttcgtccaggcttatgcaaagcatgagtgtaacctcatc
ttcagattaaaggatctcgattttgcaagtcttgctcgaggttttggcctgctgaggatg
cccaagatgccagagctgagaggaaagcagtttccagatttcgtgcctgtggacgtcagt
acagacaccattccatttaaagataaaatcagagaaaagcagaggcagaagctattggag
caacaaagaaaagagaaaacagaaaatgaagggagaagaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaaacggaatgaaaaaaggaaaagg
gaagagggttctgatatcgaagatgaggacatggaagaacttcttaatgacacaaggctc
ttgaaaaagtttaaaaaaggcaaaattactgaagaagaactcgagaaggggctgttgaca
agtggcacaggatcagtcaagacagcagatttggggatctcagatttggaagatgactgc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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