KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4326977
Entry
4326977           CDS       T01015                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03010  Ribosome
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    4326977
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4326977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:osa03011]
    4326977
   04121 Ubiquitin system [BR:osa04121]
    4326977
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4326977
Ribosome [BR:osa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    4326977
  Archaea
    4326977
Ubiquitin system [BR:osa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   4326977
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4326977
  Exosomal proteins of colorectal cancer cells
   4326977
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Ubiquitin_5 DUF2604 Ogr_Delta
Other DBs
NCBI-GeneID: 4326977
NCBI-ProteinID: XP_015621791
UniProt: Q9ARZ9
Position
1:complement(12645588..12646421)
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQQA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagacgatcacgctggaggtggagtcctcg
gacaccatcgacaacgtgaaggcgaagatccaggacaaggaggggatcccgcccgaccag
cagcggctcatcttcgccggcaagcagctggaggacgggcgcaccctcgccgactacaac
atccagaaggagtcgaccctccacctggtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagcagaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcacccgcctccgcaag
gagtgccccaacgccgagtgcggcgccggcaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagcaggcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (185)   
   KEGG ORTHOLOGY (1)   
   RefGene (180)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (11)   
   Pfam (11)   
All databases (217)   

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