KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4338072
Entry
4338072           CDS       T01015                                 
Name
(RefSeq) probable C-terminal domain small phosphatase
  KO
K15731  carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4338072
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4338072
Enzymes [BR:osa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     4338072
Protein phosphatases and associated proteins [BR:osa01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   4338072
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     4338072
SSDB
Motif
Pfam: NIF HAD
Other DBs
NCBI-GeneID: 4338072
NCBI-ProteinID: XP_015638884
UniProt: A0A0P0WJ50 Q5W6J1
Position
5:complement(6546732..6548140)
AA seq 307 aa
MVSRTPTKQPLSPLPRAASGSPTKPTPSPSPSPASARRRRVLRRGSPGRIKSLAATFDTS
LRGCRRRLLKLFARLAVLGSPTKRRAAAAGFRRLRSPPRSPSPPTPKPNQVAAVSPQLPL
PLPPVSPGRRTLFLDLDETLIHSQTDPAARARHDFAVRPVIAGQAVTFYVVKRPGVDAFL
AAAAAAFELVVFTAGLPEYASLVLDRLDPRGALFAHRLYRGACRDAGDGRLVKDLAATGR
DLRRAVIVDDNPNAYSLQPDNAVPVAPFIDDADDHELERVMGILSIAAEFDDVRDAIKRY
KEIVEAS
NT seq 924 nt   +upstreamnt  +downstreamnt
atggtgtcgaggacgcccacgaagcagccgctgtccccgctgccgagggcggccagcggc
agccccaccaagccgacgccctcgccctcgccctcgccggcctccgccaggcgccgccgc
gtgctccgccgcgggagccccgggaggatcaagtcgctcgccgcaacgttcgacacctcc
ctccgcggctgccgccgccgcctcctcaagctcttcgcccgcctcgccgtcctcggctcc
cccaccaagcgccgcgccgccgccgccggcttccgccgcctccgctccccgccgcggtcg
ccgtctcctccaacgcccaagccgaatcaggtagcggccgtctcgccgcagctcccgctc
ccgctcccgccggtgtcgccggggaggaggacgctgttcctggacctcgacgagacgctc
atccactcccagaccgacccggcggcgcgggcgcggcacgacttcgccgtgcgccccgtc
atcgcgggccaggcggtcaccttctacgtcgtcaagcgccccggggtcgacgcgttcctc
gccgcggcggcggccgcgttcgagctcgtcgtcttcaccgcgggcctccccgagtacgcc
tccctcgtcctcgaccgcctcgacccgcgcggcgcgctcttcgcccaccgcctctaccgc
ggcgcctgccgcgacgccggagacgggaggctcgtcaaggacctcgccgccacgggcagg
gacctccgccgcgccgtcatcgtcgacgacaaccccaacgcctactcgctccagcccgac
aacgccgtgcccgtggcgccgttcatcgacgacgccgacgaccacgagctggagagggtg
atggggatcctgtccatcgccgccgagttcgacgacgtccgcgacgccatcaagcgctac
aaggaaatcgtcgaggcgagctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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