KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4340037
Entry
4340037           CDS       T01015                                 
Name
(RefSeq) probable protein transport Sec1b
  KO
K15292  syntaxin-binding protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4340037
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4340037
Membrane trafficking [BR:osa04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    4340037
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    4340037
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   4340037
SSDB
Motif
Pfam: Sec1 DUF3982
Other DBs
NCBI-GeneID: 4340037
NCBI-ProteinID: XP_015641484
UniProt: Q5VNU3 B7EQ53
Position
6:complement(1901016..1909253)
AA seq 659 aa
MSMSGSDFGAPCDDPKIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYAC
KMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFF
SSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKK
FNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYK
STIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPE
RKEALLEDHDPLWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKI
VQALPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSK
QDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKAS
RPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSE
PSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRL
GNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLTAGGANDV
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtcgatgtcggggtcggacttcggcgccccgtgcgacgaccccaagatcttccgcaac
atctgccgggatcgtatactcaaggacttgctgcagccggacaaagataaggagaccaaa
agctcatggaaggttcttatcatggacaaatttacggtgaggatcatggcttatgcctgc
aagatggcagaaattaccgatgcaggaatctcgttggttgaagatcttttcaagcgaagg
gagcccatgccttccatggatgcaatctacttcctccagccactgaaagaaaatgtcata
atgcttctatctgacatgtctgggagatgtccactgtacaggaaggcatacatattcttt
agttcaccgattcctaaggagctggtctcttacataaagaacgacagcagtgtgatacca
cgtattggtgcactaagagagatgaatttggagttctttgcaattgacatgcagggattc
acaactgaccatgacatggcattcactgatttatatagtgctcagcacaactcgaaaaag
ttcaatgacactataagcactatggctactcgcattgctaccacatttgcttcgttgaag
gaatttccttgtgtgcggtatcgtgccccaaagggcacagatccaatgacaacaccaaaa
tttgacatggttccaaaatggttagcgactgctgtttgggatattgtgtcaaaatataaa
tcaacaatacctgaatttccccagaaggagacatgtgaactgctcattgtcgacaggcct
atagatcagatagcacctgttattcatgaatggacctatgatgcaatgtgccatgatcta
cttgaaatggatggccaaaaatacatatatgaggtgtcgaaagcgggatcagaacctgag
agaaaggaggctttattggaggatcatgatcctctctgggttgagcttcgccacattcac
atagctgatgctagtgagaggttgtatgataagatgaataactttgtttcaaagaataaa
gcagctcaacttcattcaagagatggtggtgaaatttctacaaaggatctgcagaagatc
gttcaagctttgccacaatacggtgaacaagttgagaaattgaccctccatatagagatt
gctggaaaaatcaacaagtttatcagagagtatggtctccgtgacattgggcaggtggag
caggatctagtttttggagatgcagcagccaaggaggtgatcagtatcctcaggtcaaag
caggatatgagcccagaaaacaaattgaggttgcttattatatatgcaattgtatatcca
gagaagtttgaaggtgacaaaggggaaaagttgatgcagctagcaaaactgccacatgat
gagatggatgccataaatagtttaagatacttggttggttcagatacaaaaaaggcatca
cggcctggcggcttctctctcaaatttgatgcacaaaagaaaaaaaatgctgcgaggaca
gaacggcaggatggcgatgaaacctgggcattatcacgttttttcccacttatagaggag
ttgattgagaaactgagcaaaggtgcattacctttgaatgaatacccatccatgagtgaa
cccagttccactgaacaaggatctacacaaagtgcagccgcgactaaaccagcacaagca
caacccatgtccaggagatcgcggcggacaccaacctgggctaagtctcgaaactctgat
gatagtcaatcaagtgactcctcggtcttgagacatggatctaatgacttcaagaggcta
ggcaaccgaatttttgtcttcatgattggtggagccactagatcggaactgcggacggtg
cacaagcttactatgaaactgaagcgcgaaattgtcctgggatcttctagcatagatgac
cctccacaatttatttcgaagctgaagatgctaactgcaggtggtgccaatgacgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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