KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4342449
Entry
4342449           CDS       T01015                                 
Name
(RefSeq) protein YABBY 1 isoform X1
  KO
K25796  plant-specific transcription factor YABBY family protein
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:osa03000]
    4342449
Transcription factors [BR:osa03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Yabby
    4342449
SSDB
Motif
Pfam: YABBY HMG_box_2 HMG_box Ccdc124 zinc_ribbon_12 Elf1
Other DBs
NCBI-GeneID: 4342449
NCBI-ProteinID: XP_015647414
UniProt: Q7XIM7
Position
7:3219928..3229235
AA seq 169 aa
MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQ
DHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFI
KEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVADGGGGGGSN
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtcggtccagtttacatcggagcatgtttgctatgtcaactgcaactattgcaacact
atccttgtggtgaatgtgccaaacaattgttcctacaacattgtgactgttagatgtggg
cattgcacaatggtgctctccatggatcttgctccttttcaccaagcacgcactgttcaa
gatcaccaggtacagaacagaggatttcaaggtaataactttggaagctatgacatagct
tccagaaatcagaggacatcgacagccatgtacccaatgccaaccagtcagcagcaagtg
tcacctatacgtccccctgagaaaagacagcgtgtcccatctgcatacaacagattcatc
aaggaggagatacagaggattaaaaccagcaatcctgagattagccacagggaggcattc
agtgctgctgcaaagaactgggctcatcttccccggctccattttggcctcagcgtcgcc
gacggcggcggcggcggcggcagcaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (19)   
   RefSeq(nuc) (3)   
   GenBank (8)   
   EMBL (8)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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