KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9266224
Entry
9266224           CDS       T01015                                 
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b isoform X1
  KO
K14563  rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    9266224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    9266224
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    9266224
SSDB
Motif
Pfam: Fibrillarin GCD14 PCMT
Other DBs
NCBI-GeneID: 9266224
NCBI-ProteinID: XP_015640581
UniProt: B7FA85 A0A8J8XS47
Position
5:4559198..4562575
AA seq 309 aa
MRPPRGRGFGRGGGGRGDGGGRGGGGGRGFGRVGDSGGRGGRGGRGGRTPRGRGGGRGGG
GRGGMKGGSKVVVVPHKHDGVFIAKAKEDALCTKNMVPGESVYGEKRISVQNEDGTKVEY
RVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGGASGTTVSHVSDIVGPTGLVYAVEFSH
RSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQARILALNASYFL
KNGGHFVISIKANCIDSTMPAEAVFASEVEKLKADQFKPSEQVTLEPFERDHACVVGGYR
MPKKQKGTS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgaggccaccgcgaggcaggggattcgggaggggaggaggagggagaggcgatggcggc
ggccgcggcggcggcggtgggaggggattcgggagggtcggggacagcggcgggagagga
ggccgtggtgggaggggaggcaggacgccgaggggccgtggcggcggccgcggtggcggc
gggaggggtggcatgaagggcgggagcaaggtggtcgtggtgccgcacaagcacgacggc
gtgttcatcgccaaggccaaggaggacgcgctctgcaccaagaacatggtccccggcgag
tccgtctatggcgagaagcgcatctccgtccagaatgaggatggaaccaaggttgaatac
agggtgtggaatcccttccgttcaaagttggctgctgctgtgcttggtggtgttgacaac
atctggattgctcctggtacccgtgtgctgtatctcggtggtgcctcaggaacaaccgtg
tctcatgtgtctgatattgttggaccgaccggtttggtctatgctgttgagttctcgcac
aggagtggtagggatcttgtcaacatggccaaaaagaggaccaatgtaattcccatcatt
gaagatgctaggcacccggcgaggtaccggatgttggttggcatggttgatgttatcttc
tctgatgttgcccagccagatcaggctaggatcttagccctcaatgcatcctacttcctg
aagaatggtggacattttgtcatttcaatcaaggcgaattgtatcgactccaccatgcca
gctgaggctgtgtttgctagtgaagttgagaagctgaaggcagatcagttcaagccctct
gagcaggtgacgctggagcctttcgagcgtgaccatgcctgcgtcgttggtggttacagg
atgcccaagaagcaaaagggtacatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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