KEGG   Oceanicoccus sagamiensis: BST96_12810
Entry
BST96_12810       CDS       T04832                                 
Name
(GenBank) RNA polymerase-binding ATPase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
osg  Oceanicoccus sagamiensis
Brite
KEGG Orthology (KO) [BR:osg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osg03021]
    BST96_12810
Transcription machinery [BR:osg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     BST96_12810
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA SNF2-rel_dom Helicase_C ResIII DEAD DUF4455 AAA_34 Myosin_N
Other DBs
NCBI-ProteinID: ARN76405
UniProt: A0A1X9NKS9
Position
2778963..2781905
AA seq 980 aa
MRELFVPSPVFVPGQRWISNTESELGLGIVVELANRRVEISFPASGERRTYAVDNAPISR
VQYEAGQQIHNELGELITVNDVLENQGCLIYNGVNEQGEAVILPEIDLNSFIQFSKPQDR
LFAGQIDKNRAFQLRCQTLENIRHQQQSQVRGLLGPRVQLLPHQLYIASEAANRHAPRVL
LADEVGLGKTIEAGLILHQQLISGRSKRVLVVVPDSLLHQWLVEMLRRFNLSFTILDEAR
CEGLEELGDVENDPFFDEEPTPQDDSYNPFESAQLVLCTLSFLTNNPERQAQAAAADWDL
LIVDEAHHLQWSEAETSPAYRCIETLARQARGLLLLTATPEQLGVASHFARLRLLDPDRY
YDLATFIEDEKKHKPVNELVQHLLADDVFEQLQSNPQLLQQLSAYLGDASVAPLQQALSG
GGGEEFDQAIATVISDLLDRHGTGRVLFRNTRSSVAGFPDRQLHQYPLQPADRYNDAIMH
AAMEELLAPELLLGSSWIAEDPRVGWLSSWLKDHRSEKVLVICARAETALDLEEHLRLRG
GVQSAVFHEGLSLVARDRAAAFFADDEEGAQVLICSEIGSEGRNFQFSHHLVLFDLPLNP
DLLEQRIGRLDRIGQRYTVDIHVPFYEDTAQQVLLRWYHEGINAFERTCPAGLALYQQFE
QALIQCLNDGDNGAAMEQLISETKTATAATLQTLQQGRDRLLELNSCNHEKADAIVETMI
EEERRQELSNYMEQVFDQYGVEQEHHSAASVILRPGDHMLEHSFPGLTEEGVTATYSREV
ALSREDMQFLSWEHPMVAGAMDMVLSGEFGNTAFCTLKLPPLKAGTVLLEAIFIVHCTAP
SELQIQRYLPLTTMRIVVDSNNTDLSKVLTPAHLDKLGQKVPKRSAQDLIRHARPQISAM
ISRAEQLAEPKKDGLIEEAAGKMQTEQVAELGRLKALAAVNPNIRQEEVEYLKQSAVSLQ
RYLQGAQLKLDAVRVALVTD
NT seq 2943 nt   +upstreamnt  +downstreamnt
ttgcgagaactgtttgtgccctcacccgtttttgtccccggccagcgctggataagtaat
accgaatctgaattaggtcttggcatcgtggtagagctggccaaccggcgggtagaaatt
agttttcccgcctccggtgagcgccgcacctatgctgtggataatgcccctatcagccgc
gtgcaatacgaggcagggcaacaaatccacaatgagctgggcgagctgattacggttaat
gatgtattggagaaccagggctgcctgatctacaacggggtgaatgagcagggcgaagcg
gtgattttgcctgagattgatctcaacagttttattcaattcagcaagccacaggaccgc
ctgtttgcgggtcaaatcgataaaaaccgcgccttccaattgcgctgccagactctggag
aatattcgccaccagcagcaatcacaggtaaggggcttattgggccccagagttcagctg
ttaccccaccagctctatattgccagtgaggccgctaaccgacatgccccccgggtatta
ttggccgatgaagtcggtttgggtaaaaccattgaagcgggtttgattttgcaccagcaa
cttatcagtggccgctccaagcgggttctggtggtggtgcctgatagtttgctacaccag
tggttagttgaaatgctacgccgttttaatttgtcctttaccattttggatgaagcgcgt
tgtgaaggtttggaagagttgggcgatgtggaaaatgacccctttttcgatgaagaaccg
acaccgcaagacgatagctataacccctttgaaagcgcacagctggtcttgtgtacctta
tcatttttgaccaataacccagagcgccaggcccaggcggcagcggcggattgggatttg
ttaattgttgatgaagcccaccacctacagtggagtgaggctgaaaccagcccggcttat
cgctgtatagaaactctggcccgccaggctcggggcctgttactactgactgcaaccccg
gagcagttaggggtggccagccactttgcccggctgcgcttactggaccccgatcgctac
tacgatctggcaacctttattgaagatgaaaagaaacataagccggttaatgagctggtg
cagcatttattagctgatgatgtctttgagcaattgcaaagcaacccgcaattactacag
cagcttagtgcttacttgggggatgcctcggtagcgccgttgcagcaggctttatcaggg
gggggcggtgaagaatttgatcaggcaattgctactgtaatcagtgatctgctggaccgt
catggcaccggccgtgtgttatttcgcaatacccgttcatccgtagccggttttccggat
cgacaattacatcaatacccattgcagcccgctgatcgttataacgatgcgattatgcat
gctgcgatggaagagttacttgctcctgaactgttattgggtagtagctggattgccgaa
gacccaagagtcggctggttgtctagctggctcaaagatcatcgctcagaaaaagtgtta
gtgatttgtgctcgggcagaaaccgcactggatttagaagagcatctcaggctgcgcggt
ggggtacagtcggcggtttttcatgagggcttatcgctggtggccagagacagagcggcg
gctttttttgccgacgatgaagagggcgcacaggtattaatttgttccgagattggcagt
gaagggcgtaactttcagttttcccaccatttagtgctgtttgatttaccgcttaacccg
gatttactggagcagcggattggtcgtttggaccgtattggccagcgttataccgtcgat
attcatgtaccgttttatgaagataccgcccagcaggtgttgttgcgctggtatcacgaa
ggtatcaatgcctttgagcgtacctgccctgcgggtttagcgttgtaccagcagtttgaa
caggcgctgattcagtgtttgaacgacggtgataatggtgctgccatggagcaattaatc
agcgaaactaaaacagcaaccgctgctaccttgcagaccttgcaacaaggtagagatcgc
ctgttagagctcaattcctgtaatcatgaaaaagcggatgccattgtcgagacaatgatt
gaagaagagcgccgccaggaattatccaattatatggagcaggtgtttgaccagtacggt
gtcgagcaagagcatcacagtgccgccagtgttattttgcgccctggtgatcatatgttg
gagcatagctttcccggcttaactgaagaaggtgtcaccgccacttattcccgcgaagtc
gccttatcccgagaagatatgcagtttcttagttgggagcacccgatggttgccggtgcg
atggatatggtacttagcggtgagtttggtaatactgctttttgtaccctgaagttaccg
cccttaaaagcgggcaccgtgctattggaagccatctttattgtccattgtacggccccc
agtgagctgcaaatacaacgttatttacctttaaccactatgcgtatagtcgtcgacagt
aataatactgacttgagtaaagtgctgacaccagcgcatttggataagttggggcaaaag
gtgccgaaacgcagtgcacaggatttgatccgccatgcccgcccgcaaatcagcgcgatg
attagccgtgctgaacaattggctgaacccaaaaaggatgggcttattgaagaggcggca
ggaaaaatgcaaaccgagcaagtggctgagttgggacgattaaaagcactggctgctgtt
aaccctaatatccgtcaggaagaggttgagtacttaaaacagtcggcggtgagtttgcag
cgttatttgcagggcgcacaattaaaattggatgcggtgcgggttgccctggtgacggat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (74)   

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