KEGG   Ostreococcus tauri: OT_ostta10g00510
Entry
OT_ostta10g00510  CDS       T01358                                 
Name
(RefSeq) THO complex, subunit 5
  KO
K13174  THO complex subunit 5
Organism
ota  Ostreococcus tauri
Pathway
ota03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OT_ostta10g00510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ota03019]
    OT_ostta10g00510
   03041 Spliceosome [BR:ota03041]
    OT_ostta10g00510
Messenger RNA biogenesis [BR:ota03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     OT_ostta10g00510
Spliceosome [BR:ota03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    OT_ostta10g00510
SSDB
Motif
Pfam: FmiP_Thoc5 Aida_N XkdW
Other DBs
NCBI-GeneID: 9832351
NCBI-ProteinID: XP_003081485
UniProt: Q010M5
Position
10:complement(92448..93890)
AA seq 480 aa
MPPRRRVPPSRSSDPVDVPSDTVARRTAASPAPLPSDVTPERTEAQIELLGELTHDLRAD
VELALDSTAEERKNISSRCQETLAKIRRAQCAALSGLEHLRDKTGERNVEVNRARTRAGT
IAYETATLERELRDFEREDGASGSVKGVDLMDRGEYEADARARGLDTEAADEYDEMKKRL
AHELIVRKELVERQKALTLELAEVKAAIEERKKTLSGDPGAIKAMKRHAEELRRKFDLPY
TTTETLDKQVAVLPGPLYILYAQLKHAQQMGEDIRVQILGREADAEAYEEAMENPTATDD
GNVRDERDGHKRQRGGRGGRGRGGRGMKLSSSTYAEHPLRIELDGVGGRKVIFNYLTKLH
MVIARANPGKDDALKDLFPGDDGSATPNHAIEIVESDFTFDESCTGYGGKPYKWAQDLAG
MSFLPSVPRSRAMIEKENLDGKAVTSKARVMDVLRAIRERFDQKKSEDAAPGSKKRERKD
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgcccccgcgtcgacgcgtccccccttcccggtcgtcggacccggtcgacgttccgtcg
gacaccgtcgcgcgccgcaccgcggcctcacccgcgccgttaccgagcgatgtcacgccc
gagcgcaccgaggcacagattgaacttttgggagaactcacgcacgatttacgcgccgac
gtcgaactcgcgctcgattccaccgcggaagaacgaaagaacatctcgtcgaggtgtcaa
gagaccctggcgaagatccgacgggcgcagtgcgcggcgttgagcgggttggaacatctg
cgggacaagacgggcgaacgaaacgtcgaggtgaaccgcgcgcggacgcgcgcgggaacg
atagcgtacgagacggcgacgttggagcgggagttgcgtgattttgaacgagaggatgga
gcgagtggaagcgtgaagggggtggatttgatggatcggggggagtacgaggcggacgcg
cgcgcgcgcgggttggacacagaggcggcggatgagtacgatgagatgaagaagaggttg
gcgcacgaattgatcgtcagaaaggagttagtggagcggcaaaaggcgctgacattagag
ttggccgaagtaaaggcggcgatcgaggagcggaagaagacgctgagcggggacccgggc
gcgatcaaggcgatgaagagacacgcggaggagttgcgaaggaagtttgacttgccgtac
acgacgacggagacgctggataagcaagtggccgttcttcctgggccactttacatcttg
tacgcgcagttaaagcacgcgcaacagatgggagaggatattcgcgtgcaaattcttggt
cgagaggctgacgccgaggcgtacgaggaggctatggaaaatcccaccgcgacggacgac
ggtaatgtcagggacgagcgcgacggtcacaagcgtcagcgcggaggtcgaggtggacga
ggcaggggaggtagggggatgaagttgtcgtcgtccacgtacgccgagcatccgcttcgc
atcgagcttgacggtgtcggtgggcgaaaggtaatcttcaactacctcaccaagttgcac
atggtcatcgcgcgtgcgaatcccggaaaagatgatgcgctcaaagatttgttcccgggc
gatgacggctcggcgacaccgaaccacgcgattgagatcgtcgagtcggactttacgttt
gacgaatcgtgcacaggttacggcgggaaaccgtacaagtgggcgcaagacttggccgga
atgagctttctcccgtccgtgccacgttcgcgcgccatgattgagaaagaaaatctcgat
ggaaaagcggtcacgtccaaggcgcgcgtcatggacgtcttgcgggcgattcgagagagg
tttgatcagaagaagagtgaagacgcggcgccgggttcgaagaagagggaacgaaaggac
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system