KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112224068
Entry
112224068         CDS       T05605                                 
Name
(RefSeq) 26S proteasome regulatory subunit 8-like
  KO
K03066  26S proteasome regulatory subunit T6
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050  Proteasome
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    112224068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:otw03051]
    112224068
Proteasome [BR:otw03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     112224068
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_5 AAA_16 AAA_22 nSTAND3 PRS7_OB RuvB_N TIP49 Filament AAA_18 AAA_17 AAA_3 Mg_chelatase AAA_28 AAA_14 Parvo_NS1 ATPase AAA_33 FapA IstB_IS21 PhoH AAA_24 AAA_7 AAA_25 APG6_N DUF815 bpMoxR HR1 Sigma54_activat RNA_helicase AAA_11 DUF5906 Zeta_toxin AAA_19 Prominin TsaE DivIC
Other DBs
NCBI-GeneID: 112224068
NCBI-ProteinID: XP_024255918
Position
LG25:2843546..2862705
AA seq 407 aa
MALEGMDHNMEMEDSKGGSGLRQYYQSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLL
REELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRND
SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG
IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR
EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID
ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV
KGVCTESGMYALRERRVHVNQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcgctggaaggaatggaccataatatggagatggaggacagtaaaggtggttctggt
ctcaggcaatactaccagtccaagatagaagagttacagttgacagtgaatgacaagagt
cagaatctcagacgtctacaggctcagaggaatgaactcaatgcaaaagtgcgtctcctt
cgtgaggagctgcagttgctacaggagcagggttcctatgttggagaggttgtgagggcc
atggacaaaaagaaagtgctggtcaaggtccatccagagggaaaatttgtggtggatgtg
gataagaatattgacatcaatgatgtgactccaaattgccgcgtggcactgcgcaatgac
agctacacccttcacaagatcctgcccaacaaggtggacccgctggtctccctcatgatg
gtggagaaagtgcctgactccacctacgagatgattggcggcctggacaagcagattaag
gagatcaaggaagtgattgagctgccagtcaagcacccagagctcttcgaggctctcggc
attgcgcagcccaagggtgtgctgctgtacggacccccaggtacagggaagaccctgctg
gccagagctgtggcccaccacactgactgcacctttatcagggtgtccggctcggagctg
gtgcagaagttcattggagagggtgcccgtatggtgcgcgagctgttcgtcatggcccgc
gagcacgcaccctccatcatcttcatggacgagattgactcgatcggctcgtcacgtctg
gagggtggcagtgggggcgacagcgaggtgcagaggaccatgctggagctgctgaaccag
ctggatggcttcgaggccaccaagaacatcaaggtcatcatggccaccaaccgtattgac
atcctagactctgccttgctccgacccggccgcatcgacaggaagatcgagttcccccct
cccaatgaagaggcccgtttggacatcctgaagatccactcaaggaagatgaacctgacg
cgtggaattaacctgaggaagattgcagaactgatgcctggagcctctggggctgaagtt
aagggtgtgtgcaccgagtcagggatgtacgccctcagggagaggagagtgcatgtcaac
caggaggactttgagatggctgtcgccaaggtgatgcagaaggatagcgagaagaacatg
tccatcaagaaactctggaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (40)   
   Pfam (40)   
All databases (50)   

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