KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112236038
Entry
112236038         CDS       T05605                                 
Name
(RefSeq) CD209 antigen-like protein A
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03260  Virion - Human immunodeficiency virus
otw03264  Virion - Flavivirus
otw04145  Phagosome
otw04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    112236038
   03264 Virion - Flavivirus
    112236038
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112236038
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    112236038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112236038
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:otw04054]
    112236038
   04090 CD molecules [BR:otw04090]
    112236038
   04091 Lectins [BR:otw04091]
    112236038
Membrane trafficking [BR:otw04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    112236038
Pattern recognition receptors [BR:otw04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   112236038
CD molecules [BR:otw04090]
 Proteins
  112236038
Lectins [BR:otw04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    112236038
SSDB
Motif
Pfam: Lectin_C Chordopox_A33R DUF2681 UL45 PAP_PilO Thioredoxin_14 DUF4183 FtsL O-antigen_lig
Other DBs
NCBI-GeneID: 112236038
NCBI-ProteinID: XP_024260375
Position
LG20:40953230..40954281
AA seq 213 aa
MDNDENTYANSSSFRASPREGAIYFQRWKRPSRAAAVCLGLLCVLLLAGIISLSVYQRNQ
STSSNNLTKERDQLQKEKENLNKKIKGRRCPEGWREFEFSCYYITNEKKTWTQSSEECQE
FGADLVIINSKEEQVFINGLYQTKNNVWIGLTDSVTEGTWKWVDGTPLTTANWERGQPNS
NNGTDQDCGEIWNRSGLWNDEKCSSKNKGICEK
NT seq 642 nt   +upstreamnt  +downstreamnt
atggacaatgatgaaaatacatatgccaattcaagttccttcagggcaagcccaagagaa
ggagcaatatatttccagaggtggaagagaccctccagagctgctgcagtgtgtctgggg
ctgctgtgtgttctcctactggctgggatcataagcctgtctgtctaccagagaaaccaa
tcgaccagttccaacaacctgactaaagagagagaccagctacagaaggagaaagaaaac
ctgaacaagaagattaaagggagacgctgtccagaaggctggagggagtttgaattcagc
tgttactacatcaccaatgagaaaaaaacctggactcagagcagtgaagaatgccaagag
tttggagcagatctggtgatcataaacagcaaagaggaacaggtatttatcaatggatta
taccaaacaaaaaataatgtctggattggtcttactgactcagttactgaagggacctgg
aaatgggtggatggtacaccactgaccacagcgaattgggagagagggcagcccaacagc
aacaatggaacagaccaggactgtggggagatctggaatcgttcagggttgtggaatgat
gagaagtgttccagtaaaaataaagggatctgtgagaaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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