KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112253286
Entry
112253286         CDS       T05605                                 
Name
(RefSeq) ectodysplasin-A isoform X1
  KO
K05480  ectodysplasin-A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112253286
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:otw04052]
    112253286
Cytokines and neuropeptides [BR:otw04052]
 Cytokines
  Tumor necrosis fators
   112253286
SSDB
Motif
Pfam: TNF Collagen
Other DBs
NCBI-GeneID: 112253286
NCBI-ProteinID: XP_042159453
Position
LG21:40386224..40414655
AA seq 415 aa
MACDGSIDDFPDKVLLTGSPSSCTCINTCKTHNRRSSRVSNISVVFLGFFILSLSLHVIT
LLCYLDLRSEVKREISLRRGVDEKLTLGGTDVTDPLIPSGARAQGHEERLLHRQLDGHPT
RHPTAPGDSSSIHRQPDGHPTRHPTAPGDSSSIHRQPDGHPTRHPTASGDSSSIHRAKRS
PRKQSDSESTGKRKETERRKKGRKRSPPGAQGSPGPPGSPGPQGPPGIPGIPGIPGSNAV
GPAGPPGRPGAQGPPGLTGAAGFVDKTKTRDFQPAVVHLQGQETTIQVKEDLSEGVLRNW
KMVSIHHRVFKMHSRSGQLEVLLDGIYFIYSQVEVYYLNFTDIASYEVMVDSTPFLRCTC
SMETGQRKFNTCYTAGVSLLRAGQRISIRMVYDDTLISMTNHTTFLGSVRLGDSP
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcatgcgatggttcgattgacgattttccggacaaagtgttgttgaccggatcaccg
tcgtcatgcacgtgcatcaatacgtgcaaaacccacaacagaagaagtagcagagtgagc
aacatcagtgtggttttcctcggcttctttattttgtctctgtctctgcacgtgatcacg
ctgctgtgctacctggatctccggtccgaagtgaagcgggagatttctctgcggagagga
gtggacgaaaagttgaccctcggtggaacggatgtgaccgacccgttgatcccctccggc
gcccgggcacagggtcacgaggagaggttgctccacagacagctggatggccaccccacc
agacaccccacagccccaggggacagcagcagtattcacagacagccggatggccacccc
accagacaccccacagccccaggggacagcagcagtattcacagacagccggatggccac
cccaccagacaccccacagcctcaggggacagcagcagtattcacagagccaaacgaagc
ccaaggaaacaatctgactcagaatcaactgggaaacggaaagaaacggaaagaagaaag
aaaggaaggaagaggtctcctcctggagctcagggctcccccggtccacctggttcccca
ggcccccaggggcctccaggtattcctggtatccctggtattcctggtagtaacgctgtg
ggccccgctggacctcctggtcgccccggagcacaggggccccccgggctgacgggagcg
gcaggattcgtcgataaaaccaaaacaagagacttccagcctgctgtggttcatctacaa
ggacaggaaaccaccattcaggttaaggaagacctgtctgaaggtgtcttgaggaactgg
aagatggtgtcgatccaccaccgtgtcttcaagatgcactctcgctccggacaactggag
gtcctactggacggcatctacttcatatatagtcaggtagaagtgtactatctcaacttc
acggacattgccagctacgaggtgatggtagactccacccctttcctgcgttgtacctgc
agcatggagacggggcagaggaagttcaacacgtgctacacggcgggggtcagcctgctg
agggcgggacaaaggatctccatcaggatggtctatgatgacacactgatcagcatgacc
aatcatactacgttcctggggagcgtcaggctgggggattccccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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