KEGG T05605: 112256873

Oncorhynchus tshawytscha (Chinook salmon): 112256873

Entry

112256873         CDS       T05605

Name

(RefSeq) spectrin beta chain, non-erythrocytic 1-like

K27409

spectrin beta, erythrocytic

Organism

otw Oncorhynchus tshawytscha (Chinook salmon)

Brite

KEGG Orthology (KO) [BR:otw00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:otw04812]
    112256873
Cytoskeleton proteins [BR:otw04812]
Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     112256873
  Intermediate filaments
   Intermediate filament-binding proteins
    112256873

SSDB

Motif

Pfam:

Spectrin CH Ribonuc_L-PSP DUF6507

Other DBs

NCBI-GeneID:

112256873

NCBI-ProteinID:

XP_042182183

Position

LG08:14161427..14235092

AA seq 2150 aa
MTSTTDFDNVEITQQYSRINTRFELLGEELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILSRVSCRISDLYLDLRDGRMLIKLLELLSGEKLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEMGQADGTQRESRTAK
DALLLWCQMKTAGYPNVNITNFTTSWKDGMAFSALIHKHRPDLVDYSGLKRSNPTHNLQN
AFNVAEQTLGVAKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVLDH
AIETEKMIDKYETLSSDLLTWIQQTIIILNNRKLANSLTGVQQQLQSFNSYRIVEKPPKF
QEKGNLEVLLFTIQSRMRANNQRVYTPKEGALVADLNRAWEHLEWAEHERERVLRDELIR
QERLEQMARRFDRKASMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEE
RIQGIVAISKELESERYHDTKRIDVRKDNILRLWDYLQELLKARRARLDKNLTLQRIFQE
MLYIINWMDGMKARLLSPDFGKHLLEVDDLLQKHALVEADITVQAERVHDSNAAALKFAN
RDSYKPCDPQVIKDRVQHLDLCYQELCALAAQRRARLEQSRRLWNFFWEMAELESWIKEK
EHILSSLDYGKDLTSVLVLQSKHSAFENELGARRAHLQQILDEGDKMIQARHFGAPQVGD
CMEDVMRQWQQLEELSAFRRQNLQDTQRFFQFQGEAEDLKAWLLDAKRQMTSDDMGHDEY
TTQRLLKRHRDLRNDVARNGATIDALTKQAAALPEELRNTPDIQRRLKDIRDLYMELMSL
CDLRQKKLDDTMALYTIFSETDSCELWMGQKETWLVGLDVPENLEDLEVVQNRLSILASD
MANVQTRVDDVNKAVKQLEDSRHPCTKEVKECQLRLNKRWEAFKAMVVDKKRKVDSALSY
HNYGLECDETEAWIRDKTRVIKSTQDLGNDLNAVMTIQRKLYGMERDVAAIEDKLNFLRS
EADQLAKDHPDNAADILFRRAELDAAWDNLRATLKDREDSLGEVSKLQTFLQDMDDFQSW
LFKTQKAVASEDLPETLPQAEQLLNLHDDVYDEMDAHEEDYHKVRDTGVSVTQGQLDDPQ
YQELDKRLKGLDRGWDELHKMWDSRKGFLDQGLGFQLFMRDTKQVETILNNQEYTLAHTD
KHDTLDGAEQALKKHEDFVCTMDANMEKLASTLEGGQRLVDSGNLYSPRVQDKMDSIHDR
YNKNRGKANEVTGILKDNRDLQHFLQNTQDLTLWINEKMLTAQDVSYDGDRNLHTKWKKH
QAFMAELASNKDWLNKIDQEGQELMDSKPDFEPIVTVRLARLHELWDKLESTAEDKARLL
FDANRSELFDQSQADMKKWLAELQKELQGDDEVKDLTNANILLKKHQQTENHVRDRAREL
EDLQEAVQKHGGPAGSREDQPELEAEQQAIQRDFQQLLTPLAQRRGKLEAAKAVHQFYRD
LADEILWVEERLPLAMSDEHGSNLQTVQLLLKKNQTLQREMKGHQPRVEEVLERGRRMAS
AATEEGGPEAERIGEQVKELKEVWARLQEEMAKRRDRLNGSNRAQQYYNDADEAEAWIGE
QELYMIADDKAKDEQSAMLMSKRHLIVKQAVDVYSDSIQKLSDRAQKMLNEDHPNGESII
RRQGQVDKQYAGLKDLAEDRRRKLDHVYHHFLLSREVEDLEHWIAERDVVASSQEMGQDL
DHVTILRDKFRDFSRETGMVGQERVDYVNQTIDELIKAGHTEAAAMADWRDSVNESWADL
LELIDTRVQLLQASHDLLKYFDDGKELVSQIQEKHNEIPADLGEDFSKADAFHRMHAAFE
RDISALGKQVQQFQETAARLHAQYAGDQATEIQAQEKEVVEAWKALLDACDGRRKRLEET
ADKFRFFTMVRDLMAWMESTIQQIETQEKPRDVSSVELLMKYHQGIRSEIDQRGPQFSDC
VAHGKALLACKHKYSAEIKEKLIQLMEKKKEMMTKWDDRWDWLRLLLEVCQFARDASVAE
AWLVAQEPYVASKDLGQTINEVEKLLKRHEAFEKSTATWEERFSALERLTTVCGRKGLGV
YLCVFVCVYVICVKLHPHLTVFSDVTIFHINKYSIQYGCVSIHYLFVGES

NT seq 6453 nt +upstreamnt +downstreamnt
atgacgtccaccacggactttgacaatgttgagatcactcagcagtacagccgcatcaac
acacgcttcgagctgctaggagaggaactggacaatgacaacagctctgcaagactgttt
gagaggtcacgcatcaaagcccttgcagatgagcgtgaggcggtccagaagaagaccttc
actaagtgggtcaactccatcctgtcccgggtcagctgccgtatctctgacctgtacctg
gacctcagggatggacgcatgctcatcaaactactggagctcctctctggagagaaactg
cccaagcccactaagggccgtatgcggatccactgtctggagaacgtggacaaggccctg
cagttcctcaaggagcagagggtccacctggagaatatgggatcacacgacattgtcgac
ggcaaccaccgcctcatcctgggactcatctggaccataattctcagattccagatccaa
gacattgtggtggagatgggacaggcagacgggactcaacgggagagtcgcacagccaag
gacgctctgctactctggtgccagatgaagactgccggatatccaaacgtaaacatcacc
aacttcaccaccagttggaaagacggaatggcgttcagcgctctcatacacaaacaccgg
ccagacctggtggactatagtggcctgaagaggtccaatccaacccataaccttcagaat
gccttcaatgtagcagagcagacgcttggagtagcaaaactgttagaccctgaagatgtg
ttcacagagaacccagatgagaagtccatcatcacatatgttgtggctttctaccactac
ttctccaaaatgaaggcactagcggtggaggggaagagagttggcaaggtactagaccat
gccatagagacagagaagatgattgacaagtacgaaaccctgtcgtcagacctgctgaca
tggatacagcagaccatcatcatcctgaacaaccgtaaactggcaaactctctgaccggg
gtccaacagcagctccaatccttcaactcctaccgcatagtggagaaaccccccaagttc
caggagaaaggtaatctggaggtgctgctgttcaccatccagagtcgtatgagagccaac
aaccagagagtctatacccccaaggagggggctctagtggctgatctcaacagggcctgg
gagcatttggagtgggctgagcatgagagggaacgtgtcctgagagacgagctgattcgt
caggagagactggagcagatggccagacgcttcgacaggaaggcttccatgagagagacc
tggctactggagaaccagagactggtggcacaggacaacttcggctacgacctgccggcg
gtagaggccgctaagaagaagcacgacgccatcgagacggacatcgctgcctacgaggaa
cgcatccagggcatagtagccatctctaaagagctggagtctgagcgttaccacgacacc
aagcgcatcgacgtgcgtaaggacaacatactgaggctgtgggattacctacaggagctg
ctgaaagctcgcagggcacgactggacaagaatctcaccctgcagaggatcttccaggag
atgttgtacatcatcaactggatggatgggatgaaggctcggctgctctcccctgacttt
gggaagcacctgttggaggtggatgacctgctccagaagcatgctctggtggaggccgac
atcactgtgcaggcagaaagagttcacgactccaacgcggctgctctcaagtttgccaat
agagatagctacaagccctgtgacccccaggtgattaaggaccgggtgcagcacctggac
ctgtgttaccaggagctgtgtgcccttgcggcccaacgccgcgcccgactggagcagtcc
cgacgcctctggaacttcttctgggagatggccgagctggagagctggatcaaggagaaa
gagcatatcctctcctcgctggactacggcaaggacctgaccagtgtgctggtcctgcag
agcaaacacagtgccttcgagaacgagctgggggctcgccgtgcacacctgcagcagata
ctggatgagggtgataagatgatccaggccagacacttcggggcgccccaggttggggat
tgcatggaggacgtgatgcgtcagtggcagcagctggaggaactgtcagcgttcagaagg
cagaacctccaggacacccagaggttctttcagttccagggagaggctgaagacctgaag
gcctggctgctggatgccaagaggcagatgactagtgatgacatgggccatgatgagtat
accacccagaggctgctgaagagacaccgagacctccggaacgatgtcgccaggaacgga
gccaccatcgatgctctgaccaaacaggcggcggcgctacccgaggagctgcgcaacacg
cctgacatccagagacgtctgaaggacatcagagacctgtacatggagctaatgtccctg
tgtgacctgaggcagaagaagctggatgataccatggccctctacacaatcttcagtgag
acagactcctgcgagctgtggatgggccagaaggagacctggttggtggggctggatgta
ccggagaatctagaggatctggaggtggtgcagaacaggttgagtattcttgcttcagat
atggctaatgtccagacgcgtgttgatgatgtcaacaaagcagtgaagcagcttgaggac
agcagacacccttgtaccaaagaggtgaaggaatgccagttgagacttaataagaggtgg
gaggccttcaaggccatggttgtggacaagaagcgtaaggtggattcagctctcagctac
cacaactatggactggagtgtgacgagacagaggcctggatcagggacaaaacccgggtc
atcaagtctacccaggacctgggcaacgacctgaacgctgtgatgaccatccagaggaaa
ctctacggcatggagcgggacgtggctgccatcgaagacaagctcaacttcctgaggagc
gaggcggaccagctggccaaggaccacccagacaacgctgcagacatcctgtttaggaga
gccgagctggacgcagcctgggataacctgagggccaccctgaaggaccgggaggactct
cttggagaggtgtccaaactgcagaccttcctacaggacatggatgacttccagtcctgg
ctcttcaagacccagaaggccgtggcatccgaggacttgcctgagaccctgccccaggct
gagcagctgctgaacctccacgatgatgtatatgatgaaatggatgctcatgaggaggac
taccacaaggtgagggacacgggcgtgtcggtaactcagggccagctggacgaccctcag
taccaggagctggacaagaggctgaagggtctggaccgcggctgggacgagctccacaag
atgtgggacagcaggaagggcttcctggaccagggcctgggcttccagctgttcatgagg
gacaccaagcaggtggaaaccatcctcaacaaccaggagtacactttggcccacacagac
aagcacgacaccctggatggagccgagcaggccctaaagaagcacgaggactttgtctgc
accatggacgccaacatggagaagcttgccagcacgcttgaggggggacagagattggtg
gacagtgggaacctctactcccccagggtccaagacaagatggactccatccatgacagg
tacaacaagaaccgaggcaaagccaacgaggtgacagggatcctcaaggataaccgtgat
cttcaacacttcctgcaaaacactcaggatctgactctgtggataaacgagaagatgttg
actgctcaggacgtgtcgtacgacggagacaggaaccttcacaccaagtggaagaagcat
caggccttcatggctgagctggcctccaacaaagactggctcaacaagatagaccaggag
ggtcaggagctgatggactccaaacctgatttcgagccaatcgtgacggtgcgtctggcc
aggctgcatgagctgtgggacaagctggagtccactgccgaggacaaggcccgtctgctg
tttgatgctaaccgctccgagctgtttgaccagagtcaggctgacatgaagaagtggctg
gctgagctgcagaaggaactacagggagacgacgaggtcaaggacctcaccaacgccaac
atcctgctcaagaagcaccagcaaacagagaaccacgtgcgtgaccgagccagggagctg
gaggatctccaggaggctgtccagaagcatggtggcccggccgggagcagggaggaccag
ccggagctggaggctgagcagcaggccatccagagggacttccagcagctcctcaccccc
ctggcccagcgcaggggcaagttggaggcagccaaggctgtgcatcagttctaccgggac
ctggctgatgagattctctgggtagaggagaggttgccccttgcgatgtcagatgaacat
ggcagcaacctccagacggtccaattgctgttgaagaagaaccagacgttacagagggag
atgaagggccaccagccgcgggtggaggaggtgttggagcgtggccggaggatggcatca
gccgctacagaggagggcgggccggaggcagagcgtattggagagcaggtgaaggagctg
aaggaggtgtgggccaggctacaggaggagatggctaagaggagagaccggctgaatgga
tctaaccgggcccagcagtactacaacgatgctgacgaggcagaagcctggataggagag
caggaactctacatgattgctgatgacaaggccaaggatgagcagagtgccatgttgatg
tcgaagcgtcacctgatagtgaagcaggctgtagatgtctactcagactccatccagaag
ctgtctgatcgtgctcagaagatgctgaatgaagaccaccctaatggtgaatctatcatc
cgtcgtcagggccaggtggataaacagtacgctggtctgaaggacttggcagaagaccgc
aggaggaagctggaccatgtctatcatcacttcctgctgagccgagaggtggaggatctg
gagcactggatcgctgagagggacgtggtggcctcctcacaggagatgggacaggacctg
gaccatgttacaatcctgagggacaagttccgtgacttttcccgggagacagggatggtg
ggacaggagcgggtggactatgtgaaccagacgatagatgagctgatcaaggcgggccac
acggaggctgctgccatggctgattggagggacagcgtcaacgagagctgggctgacctg
ctggaactcatagacacccgagttcagctcctacaggcctcccatgacctgctcaagtac
ttcgatgatgggaaggagctggtgtctcaaatccaggagaaacataatgagattcctgct
gacctgggagaagacttcagcaaggcagatgccttccaccgcatgcatgccgccttcgag
agggacatcagcgccctgggaaaacaggtgcagcagttccaggagacagcggcccgtctg
cacgcccagtatgctggggaccaggctacagagatccaggcccaggagaaggaggtggtg
gaggcctggaaggctctactggatgcctgtgacggccgcaggaaacgcctggaggagaca
gctgacaagttccgcttcttcaccatggtccgagacctgatggcctggatggagagcacc
atacagcaaatagagacacaggagaaaccacgggatgtgtcatcagtagagcttcttatg
aagtaccaccaggggatcaggtctgagatcgaccagcgtggaccacagttctctgactgt
gtggcgcacggcaaggctctgctggcatgcaaacacaaatactctgctgagatcaaggag
aaactgatccagctgatggagaagaagaaggagatgatgaccaagtgggacgaccgatgg
gactggctcaggctcttgttggaggtgtgccagtttgcgcgggatgcctcagtggcggag
gcgtggctagtggctcaggagccgtatgtggccagtaaagacctgggacagactataaac
gaggtggagaaactactgaagagacacgaagcctttgagaagtccactgccacctgggag
gaacgcttctcagccctggagagacttactacggtatgtggtagaaaaggattgggtgtg
tatttgtgtgtgtttgtttgtgtgtatgtgatctgtgtaaagcttcatcctcatttgaca
gttttttctgatgtcaccattttccatataaacaagtacagtatacagtatgggtgtgtg
tctatccattacctgtttgtgggcgaaagttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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