KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112258481
Entry
112258481         CDS       T05605                                 
Symbol
atf4b
Name
(RefSeq) activating transcription factor 4b isoform X1
  KO
K04374  cyclic AMP-dependent transcription factor ATF-4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04137  Mitophagy - animal
otw04141  Protein processing in endoplasmic reticulum
otw04210  Apoptosis
otw04261  Adrenergic signaling in cardiomyocytes
otw04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112258481 (atf4b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112258481 (atf4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    112258481 (atf4b)
  09143 Cell growth and death
   04210 Apoptosis
    112258481 (atf4b)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    112258481 (atf4b)
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    112258481 (atf4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112258481 (atf4b)
Transcription factors [BR:otw03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   AP-1(-like) components, CRE-BP/ATF
    112258481 (atf4b)
SSDB
Motif
Pfam: bZIP_1 bZIP_2 Nop53 COG3_N ZapD
Other DBs
NCBI-GeneID: 112258481
NCBI-ProteinID: XP_024288643
Position
LG09:complement(67571635..67574610)
AA seq 425 aa
MTMMSSQFGLDDMEALLWGPSSLMADPMGSLRHQDEVASIEGGASPLSSSSSSPLLLLSP
PPTPPSLLLQEEKAEADLLSFPWLSADQLGHTHHIGADDGKEDAFSGMDWMAERVDLSEF
DLDSLIGSCSPDGSPSSPEDLITSFECPMELDLLPLPTLPIPTDLPTTTDPLLPPTMSQP
QEDPQEGFHSPPPCVPDAQEELEIKSEPQSPAPSPPPSPTFTLELGSEVYVSASVSEKPL
HLEVPQPVPSIVLSLSPTRIVVLLAPKREVGVTTTITIPEILSDSDSSFSSSGQLNRPSI
ATTQSRFQNESKPYPTTPKSRPQHPDQPSTTTSSGKMKSSSGGPPKEKKLKKMAQNKTAA
TRYRQKKKTEQEALSAECDDLEQRNHKLAEKAESIANEIQYLKDLMEEVRQAKSKKGLVT
SNCTV
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgaccatgatgagctcacagtttggcctggacgatatggaggccctactctgggggcct
tcctctctcatggctgaccccatggggtcgctgcgccaccaagatgaagttgcctcgata
gaggggggggcttcacccctctcgtcatcttcctcttctccacttctccttctatccccc
cctcccactccgccgtcactgctcctccaggaagagaaggctgaggcagacttgctgtcc
ttcccttggctatctgctgaccagctaggccacacccatcacattggtgcagatgatggg
aaagaagatgccttttctggcatggactggatggccgagagggtagacctgagtgagttt
gatttggactcccttattggttcctgcagcccagacggttcccccagctcccctgaagac
ctcatcacttcctttgagtgtcccatggagctggacttactccccctccccactctccct
attcccacggacctccccaccaccactgatccacttctccccccgaccatgtcacagccc
caggaagaccctcaggaggggtttcattcacctcccccctgcgtccctgatgcccaggag
gagctggagatcaagtcggagccccagtccccagctccctctcctcctccatctcccacc
ttcaccttagagctgggcagtgaggtgtatgtctcagcgagcgtcagcgagaagccactt
cacctggaggtcccccagccggtccccagcattgtgctgtctctctcgccgacccgcatc
gtcgtcctcctggcccctaaacgggaggtcggtgtgacaaccactatcaccatcccagag
atcctctctgacagtgacagcagcttcagctcctctggtcagctcaaccggccctccatt
gccacaactcagtcaaggttccaaaacgagagcaaaccgtacccaacaacccccaagtct
aggccacaacatccagaccagccatccaccaccacatcgagtgggaaaatgaagtcctcc
tctggaggacccccgaaggagaagaagctcaagaagatggcgcagaacaagacggcggcc
acgcgctaccgccagaaaaagaagactgagcaggaggccttgagcgcggagtgcgacgac
ctcgagcaaaggaaccacaagcttgcggagaaagcagaatccatcgccaatgagatccag
tatctcaaggacctcatggaggaggtgcgccaagctaagagcaagaagggcctcgtgacc
tctaactgtactgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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