KEGG   Salipiger abyssi: Ga0080574_TMP1741
Entry
Ga0080574_TMP1741 CDS       T04681                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
paby  Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:paby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paby03016]
    Ga0080574_TMP1741
Enzymes [BR:paby01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Ga0080574_TMP1741
Transfer RNA biogenesis [BR:paby03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Ga0080574_TMP1741
 Prokaryotic type
    Ga0080574_TMP1741
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: APZ52075
UniProt: A0A1P8URP7
Position
1062728..1063642
AA seq 304 aa
MARKKGRDISGWLIVDKPAGMTSTSVVNKVRWALAAKKAGHAGTLDPEATGVLAVALGEA
TKTVPYITDALKAYRFTVRLGQRTNTDDAEGEITAESAARPSDDEIKEALHGFVGEIMQV
PPQFSAVKIDGERAYKRARDGETMEIEARPLWVEELVMTGRPDADHVELEMTCGKGGYVR
AIARDLGEKLGCHGHVLRLRRIWSGPFEAEDGIGIEEIDALAKTPELDEKLLPLEVGLAE
LPELKCTAEGAARLRNGNPGMVIPGDVDYGDEAWASFDGQAVAVGVFKGGELHPTRVFVR
GERD
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcacgcaagaagggtcgcgatatttccggctggctgatcgtcgacaaaccggcgggg
atgacctcgacctcggtggtcaacaaggtccgctgggcgctggcggcaaagaaggccggc
catgcgggcactctggacccggaagcgaccggcgtactggccgtggcgctgggagaggcg
accaaaaccgtgccctatatcaccgacgcgctgaaagcctaccgcttcaccgtgcggctg
ggccagcgcaccaataccgacgatgccgaaggcgagatcaccgcagaaagcgccgcgcgc
ccctcggatgacgagatcaaggaagcgctgcacggctttgtgggcgagatcatgcaggtg
ccgccgcaattctcggcggtgaagatcgacggcgaacgcgcctataagcgcgcccgcgac
ggcgagaccatggagatcgaggcgcgcccgctctgggtcgaggagctggtgatgaccggg
cgccccgatgccgatcacgtcgagctggaaatgacctgcggcaagggcggttacgtccgc
gccatcgcccgcgatctgggcgagaaactgggctgtcacggccatgtgctgcggctgcgg
cggatctggtcgggcccgttcgaggccgaggacggcatcggtatcgaagagatcgacgcg
ctggccaagacgccggagctggacgaaaagctgctgccgctggaggtcgggctggcggaa
ttgcccgagctgaaatgcaccgccgagggcgcggcacggctgcgcaatggcaatcccggc
atggtgatccccggggatgtcgattatggcgacgaggcttgggcgtccttcgacggtcag
gcggttgccgtgggtgtgttcaagggcggagaactgcacccgacgcgggtcttcgtgcgg
ggcgagcgcgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system