KEGG T06012: 103922558

Pygoscelis adeliae (Adelie penguin): 103922558

Entry

103922558         CDS       T06012

Symbol

DDX60

Name

(RefSeq) probable ATP-dependent RNA helicase DDX60

K20103

ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]

Organism

padl Pygoscelis adeliae (Adelie penguin)

Brite

KEGG Orthology (KO) [BR:padl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:padl03019]
    103922558 (DDX60)
Enzymes [BR:padl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103922558 (DDX60)
Messenger RNA biogenesis [BR:padl03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     103922558 (DDX60)

SSDB

Motif

Pfam:

DEAD ResIII Helicase_C

Other DBs

NCBI-GeneID:

103922558

NCBI-ProteinID:

XP_009328985

Position

Unknown

AA seq 1825 aa
MDSAEDHFKKVVHNDANENASNDDTDSECSDSEKIGFIPTKEDKESGSTIGSDEEDETSD
KEEAAVTQMVKEQEDREKETEDPDYSKAYSILTTEEVTQQASQTEGKDFRVLQHECDSQS
PEIRKHLEFLKKLRLHVWASLSRAQYVSLLKDFVESEFFVIDGDSLLLMFLDEETQYLNF
FYQIECFLQDFTEKGAKYVIVFFEDAEQMYFPYPHFLFLRTALIEHLRHNTGTTVHTEFS
NCLSSKWEIFLKKSYPYFIIVSDIGLTSLQTDYLSIFIAHSLSKKINIVLASGQEYDILR
VYGYHVQSVYKHRLFFQKHKQDLRYACENLVRYEEPFVCLYEHLKLSLKSIQKEVCQTVC
LLKQLWPEGSDIRRVVCVLACAVGLKIYSNMLENANTSVGAKPEQSARGRSKPLSPEGAA
ELCRMQCLTVAFLLHMPLAQRAQIRIMKSCWTKQVLPLIKMQQLCTHFALTQLGDTNDWK
VDLTYLPDLNDDSLLINLAHYYEVEYTEGLEFKKELGKEMENEYQYLWDTVTKLAVKYSF
GDAFPIRKTSQLFLEQEQTLFRAYEEEIPNIGLISVKSDLVEDYAGDVLKDLPVLESNDP
AVTSLIKHKEFDELRHWHSGRPLTEEYERVPCNADAKSKDPQERRQIQKLQTFYHFYGST
LEDSTSKVIVYQEGVSGNANAAVKKTQKKHKSKAETIAEENNRRLKTKEEKKEQEQWKTL
RISAEKEIKANLTVGINKLEKFLKTLKSKSVKFSAEMRGLSACVEVWKEHCREQGNKSKD
LSKAVQVVRRIHILLEKYQDLLEKPHLQKLTRYLRLLGFENLACSLSGQTGEHNDQNISN
YAIEVGPARFQLQYMDYYLLREERNDPDPRVQHFIPDTWQRELLDAVDNNESAVIVAPTS
SGKTYASYYCMEKVLKTSNDGVVVYVAPTKALVNQVVGTIYSRFTKKLPDGLVVCGVFTR
DYRNDVMNSQILVTVPQCLEILMLSPRCQKWTKRIQYVIFDEVHCLGGEIGAEVWEHLLV
TIRCPFLALSATVSNPEHLTEWLQSVKRYWQCAENTIKGSSTNSEKNFTRKCKVKSKVQE
QKKSYRVRLVLYEERYNDLEKYVCSLKGGDFIIEHCHPCAALTVNHIENYGIPSDLSLSP
RESIQLYDTMVKVWQEWPRAQELDPEEFVSFKNKVVIKKADVRKYEQELKKELSKWIVLG
QRRKVNELLEHLKPKPVDCPEHEKWKHFASFVDKLHEMDKLPAIFFIFNVDSVECAARNV
FLSLLRKQKIEQDPNTEREKERLRDELRKVKKMLTKFNPQDTKKLSSTKMENMVLLLTTK
QQLENRLEKLTAIPSACTYADPKAVDKDTLMKIFHRLRFERRGYLQQMMALRGIGYHHGS
MSIKERQVVEMLFRLGYVKVVTATSTLALGINMPCKSVVFAEDSVFLDALNYRQMSGRAG
RRGQDMIGNVFFYDIPLPKVERLIKSNVPQLKGQFPLTVSLILRLMLLAAKADDKADARA
KALSVLKHSLMSFRKERYAEILKIYFMFSLQFLIKEGYLDQEGNPIGFAGLVTHLYYYEP
SNFVLVSFLVKGLFHKLCQPIKGSTVFSEDVLEKLVLILANLFGRKYLPACSMKCKHTFC
QSKVFLEDLPEDFADAVNEYNTKVEENFAHFLLTTAKLADTEQEYRLPLSKTDFTSKNWH
GSELASSLMDNTKSVSAISPFACLSGVVDNDLFHGEIINKAVLRSLGINATNCPRLYLNK
YDNQGRRRPLNAYALDFYKHGSLIALTTDNWLNEGDAYYALKDFSLLIKSIGTSLSELCD
DPNDNVLLAFQQLGEIYEEKLKCVT

NT seq 5478 nt +upstreamnt +downstreamnt
atggattctgcagaagatcatttcaagaaagttgttcataatgatgcaaatgagaatgct
agtaatgatgatacggatagtgagtgtagtgacagtgagaaaataggcttcattccaaca
aaggaagataaagagagtgggagtacaattggcagtgatgaggaggatgagaccagtgac
aaagaggaagcagctgttacacagatggttaaagaacaggaagatagagaaaaagaaacc
gaagacccagattacagtaaagcttatagtatcttgaccactgaagaagtgacacagcag
gcatcacaaactgaaggcaaggatttcagagttctccagcacgaatgtgattcccaaagc
cctgaaataagaaaacatcttgaatttctgaagaagttgaggctacacgtttgggcatcc
ctatcaagagctcagtatgtcagtctgttaaaagactttgttgagtctgaattctttgtg
atagatggggattccttactacttatgtttttagatgaggaaacacagtatctaaacttc
ttctaccaaattgaatgcttcctgcaggatttcactgaaaaaggagcaaaatacgttatt
gttttctttgaggatgcagaacagatgtactttccatatcctcattttcttttcttacgt
actgcattaatagaacacctgaggcataacacaggcaccactgttcatacagaattttcc
aattgtttatcatccaaatgggagattttcctgaagaaaagctatccttacttcatcatt
gtgtctgacataggactgacctctctccaaacagactatttatctattttcattgctcat
tcattgtcaaagaaaatcaacattgtgcttgcttcaggacaggagtatgatattcttaga
gtttatggatatcatgttcagagtgtgtataaacacagattattttttcaaaagcataaa
caagatctgcgatatgcctgtgaaaacctagtcaggtacgaagaaccattcgtgtgtctc
tatgaacatctcaagctgagcctgaaaagcatacaaaaagaggtttgccagactgtctgt
ctgttgaaacaactgtggcctgaaggatctgacattcggcgtgtggtctgtgttcttgct
tgtgctgtgggattaaaaatatacagcaacatgttggaaaatgcaaatacttcagtggga
gcaaaaccagagcaatcagcaagaggaagaagtaaacccctatctccagaaggagcagct
gagctctgtagaatgcaatgtcttacagtggcttttcttcttcatatgcctcttgcacag
agagctcagattaggatcatgaaatcctgctggactaagcaagttttaccattaataaaa
atgcaacagttgtgtacgcattttgctttgacacagctaggtgatacaaatgattggaaa
gtggatttaacttacctgcctgacttaaatgatgattcactgctcataaatctggcacat
tattatgaggtcgaatacaccgaaggattagagttcaaaaaggaattggggaaagaaatg
gagaatgaataccaatatttatgggacactgtaacgaaactggctgtgaaatacagtttt
ggagatgctttcccaatacgaaagacctcccaactatttcttgaacaggaacagacatta
tttagagcctatgaagaagaaattcctaacattggactaatctcagtgaaatctgatctt
gttgaagattatgctggagatgttttgaaagacctacctgttttagaaagcaatgatcct
gcagttacttcacttattaaacacaaggaatttgatgagcttcgtcactggcattctggc
agacctttaactgaggaatacgagcgagtaccgtgcaatgctgatgcaaaatccaaagat
ccacaagaaagaagacaaatacaaaagttacagactttttatcatttttatggaagcact
ttggaagacagcacttcaaaagttattgtatatcaagagggtgtgtcagggaatgctaat
gctgctgtcaaaaagacacaaaaaaagcataaaagtaaagcagaaacaattgcagaggaa
aacaacaggcgactaaaaactaaagaagaaaagaaagaacaggagcaatggaaaaccttg
cgtatatcagctgaaaaggaaataaaagcaaatctgactgttggaataaataaattggag
aagtttctcaagacccttaaaagtaaatctgtgaagttcagcgcagaaatgagaggactg
tctgcctgtgtagaagtgtggaaggaacactgcagagagcaaggtaacaaatctaaagat
ttaagcaaagctgttcaagttgtgaggagaattcatatcctccttgaaaaatatcaagat
ctcttggagaaaccacatctacaaaagctgaccagatatctaaggcttcttggatttgag
aatttggcatgctctctatctggccagacaggagaacataatgatcagaatataagcaac
tatgctattgaagtgggtccagctcgctttcagctacaatacatggattattatttgctc
agagaagagaggaatgatccagatccccgagtgcaacatttcataccagacacatggcag
cgagaacttcttgatgctgtagataataacgagtctgcggtgattgtcgctcccacttca
tcaggaaaaacatatgcatcatactattgcatggaaaaagttctgaaaacgagcaatgat
ggagtagttgtgtatgttgctcctacaaaggcccttgtaaaccaagtggtgggaactata
tacagtcgattcaccaagaaacttccagatggattggtagtgtgtggagtcttcacacga
gattatcgcaatgatgtcatgaattctcagatactagtgaccgtgcctcaatgtttagaa
atcttgatgctgtctcctcgttgccagaaatggaccaaacggatacaatatgttatattt
gatgaggtccattgtcttggcggtgaaattggagcagaggtttgggagcaccttctggta
acaattcggtgtccatttttggcgctctctgctactgtcagtaacccagaacacctaact
gagtggttacagtctgtgaaaaggtattggcaatgtgctgagaatacaataaaaggaagc
tccacaaactctgaaaagaactttacaagaaaatgtaaagtgaaatctaaagtacaagaa
caaaagaaatcatatcgtgttagactagtcttgtatgaagaaagatacaatgatttggaa
aagtatgtgtgctctctaaagggcggtgattttatcattgaacactgtcatccgtgtgct
gcattaacagtcaatcatattgagaactatggtattccttcagatctttctctatctcca
cgagagagcatccagctttatgacacaatggtaaaagtctggcaagagtggccaagggca
caggagctagatcctgaggagtttgtctctttcaagaataaagtagtaataaaaaaggca
gatgtgaggaaatatgaacaggaactgaagaaagaactaagcaaatggattgtgcttggc
caaagacggaaggtgaatgagctactggagcaccttaagccaaaacctgtggattgccca
gaacacgaaaagtggaagcattttgcaagctttgttgataaattacatgagatggataag
ttgcctgccatattttttatatttaatgtggattcagtggaatgtgcagccaggaatgta
ttcctcagtttgctgagaaaacaaaaaattgaacaagaccctaatacagagagggaaaaa
gaacgtttaagagacgaactaagaaaagtgaaaaaaatgctaacaaaattcaaccctcag
gataccaaaaagttgagctccactaaaatggaaaacatggtacttcttttgactacaaaa
caacagttagaaaacagacttgaaaagctaactgctatcccttctgcatgtacttatgct
gatcctaaagcagtggataaagacactttgatgaagatttttcatcgacttaggtttgag
agaagaggttatctgcagcaaatgatggcactgaggggcattgggtatcatcatggatct
atgtccatcaaggaaagacaagtagtggagatgcttttcaggctgggatatgtcaaggta
gtcacagctacttcaacacttgctctaggaatcaacatgccatgtaaatctgttgtcttt
gctgaagattctgtgtttttagatgccctaaactacagacagatgtcaggacgtgctgga
agacggggacaagatatgattggaaatgtgttcttctatgatatcccactgcccaaagtt
gaaagacttatcaaatccaacgtacctcagttgaaaggccagtttcctctgactgtttcc
ttaatattgagactcatgctgctggctgcaaaggctgatgacaaagcagacgccagagca
aaggcattgtcagtgttgaagcactcactgatgtcattcagaaaggaaagatatgcagaa
atattaaaaatttattttatgttttccttgcaatttcttatcaaagagggctacttggat
caagaaggtaaccccataggatttgctggacttgtgacacacttgtactattacgaacct
tcaaattttgttttagtgagctttcttgtgaaaggtttattccataaattgtgccagcca
attaaaggctcaactgttttctcagaagatgtcctggaaaagctagtgctcattctagca
aacctatttgggagaaaatatcttccagcctgctcaatgaaatgtaaacatacattttgc
cagtcaaaggtctttctagaagatctgccagaagattttgcagatgctgtaaatgagtac
aacaccaaagtagaggaaaattttgctcattttcttctgacaactgccaagctggcagat
accgaacaagaatacagacttccactgtcaaagacagattttacgtctaagaattggcat
ggctctgaactagcatcttctttgatggacaacaccaaaagtgtatctgccatctcacct
tttgcatgtttatctggagtggttgataacgatctatttcatggggagatcataaataaa
gctgtcttacgttcccttggaattaatgccacaaactgcccccggctttatttgaacaag
tatgataatcaagggaggaggaggccactcaatgcatatgcactggacttttataagcat
ggctccttgattgcattgacaactgataactggttaaatgaaggagatgcttactatgca
ctcaaggatttttcactcctcattaagtctattggaacatcactgagtgaactgtgtgat
gatccaaatgataatgttctactggcatttcaacaactgggtgaaatctatgaagagaaa
ctgaagtgtgttacctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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