KEGG   Paenibacillus sp. FSL R7-0331: R70331_29760
Entry
R70331_29760      CDS       T03357                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
paee  Paenibacillus sp. FSL R7-0331
Pathway
paee03022  Basal transcription factors
paee03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    R70331_29760
  09124 Replication and repair
   03420 Nucleotide excision repair
    R70331_29760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paee03021]
    R70331_29760
   03400 DNA repair and recombination proteins [BR:paee03400]
    R70331_29760
Enzymes [BR:paee01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     R70331_29760
Transcription machinery [BR:paee03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     R70331_29760
DNA repair and recombination proteins [BR:paee03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     R70331_29760
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD
Other DBs
NCBI-ProteinID: AIQ55257
UniProt: A0A089L3A4
Position
complement(6573895..6576210)
AA seq 771 aa
MHFAEISISVRSLVEYVFSSGSLMPGFHSSAAMAEGTRIHQHIQKQYKEGDRKEVYLKTE
IPHEGLLFIVDGRCDGLLTGEDGAVTVEEIKSTGELPEPDFAGKEVHWAQALMYAYIICL
DHELTDIRVKLTYVRRGGETQQSLYRNVTLAELQVFAAETVAGYAPYAQLQVRHAEERDS
SIRALGFPFPAYRSGQRHFAAAVYKSVIEGVNLFAQAPTGIGKTMSTLFPALKAMGEGRA
AGLFYLTAKTVNRLAAQDAIGMLLDQGLQLHVITITAKDKACFKEEGVCSKESCPYREGY
YDRINGAVLDMLEHEKLMTQEVISRYARRHEVCPFEFSLDTAYACDAVICDYNYIYDPRI
SLKRLPEERKRRTVLLVDEAHNLVDRGRSMYSAELTKAPFLALQRQYKGVNKALSAAAKA
VNAFFIALRKTCSEDGEGQWSAYPEELPELLEAFSLEAEAELLSPSALLPASGDAEEEGE
GLLDVFFAVQNMLRTFKTYDERYITYAEVRRGDVCLKLFNLDPSHLLQQMAKSFRSQILF
SATLTPLSYYRDMTGAKEEDYSLTVPSPFHKEQWEVSVLPVSTRYREREASLGPLCDALK
GMTARKGNYLVFFPSYAYLQSVYELFAEKYPEVPTLVQSTGMSEPEREGFLASFRPDNPQ
TLLGFAVLGGIFSEGVDLPGDRLNGVMVVGVGLPQVGLERNLLRSYFQSAGKNGFDYAYV
YPGMCKVLQAGGRLIRSESDNGVIILADDRFLQYPYRQLLPDEWQDYLLIT
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgcattttgcggaaatttccatatcagtaaggtcattggtggaatatgtattcagcagc
ggcagccttatgccgggctttcacagcagtgcggcgatggccgaggggacacgtattcat
cagcatatacagaagcaatataaggaaggtgaccgcaaagaggtctatttgaagacagag
atcccgcatgaggggctgctgtttattgttgacgggcgctgtgacggcctgctgaccggg
gaagatggagctgtaaccgtagaggagatcaaatctacgggtgagctgccggagccggat
tttgcaggtaaggaggtgcactgggcacaggcgctcatgtatgcctatatcatctgtctg
gaccatgagcttacggatatcagagtaaagctgacctatgtcaggcgcggcggcgaaacg
cagcagagcctgtacaggaacgtaacacttgccgagctgcaggtgtttgccgctgagaca
gttgccgggtacgctccttatgcacagctgcaggtccgtcacgcagaggagcgggacagc
agtatccgggcgctggggtttccttttccggcttaccggagcggacagcggcattttgcg
gcggcggtttataagtcggttatagaaggtgttaatctgttcgcacaggcgccgacggga
attggaaaaacgatgtctaccctctttccggcactcaaggcaatgggggaaggcagggcg
gcggggctgttctatctgacggccaagaccgtcaaccggctggcagcccaggatgccatc
gggatgctgcttgaccaggggcttcagctgcatgtcattacgattaccgccaaagacaag
gcctgctttaaggaggagggggtatgcagcaaagagagctgcccctacagagagggctat
tatgaccggatcaacggggcagtcctggacatgcttgagcatgagaagctgatgacacag
gaggttatctcccgctatgcgaggaggcatgaggtctgtccgttcgaattttcgctggat
acagcgtatgcctgcgatgcagtgatctgcgactataactatatatatgacccgcggatc
agcctcaaacgcctgcccgaggagcggaagcggcggacggtgctgctggttgatgaggcg
cataatctggttgaccgcgggaggtccatgtattcggctgagctgacaaaagctcctttt
cttgccctacagcgtcagtataagggtgtaaacaaggcgctcagtgctgcggctaaggca
gtcaatgcctttttcatagctctgcgcaaaacctgcagtgaagacggagagggacaatgg
agcgcctatcccgaggagctgccggaactgcttgaagccttttctctggaggcagaggcc
gagctgctgtcgccttctgccctgcttcctgcatccggagatgcggaggaagagggggag
gggctcctggatgtcttctttgccgtgcagaatatgctgcgtacgttcaaaacctatgat
gaacgctatattacctacgcggaggtgcggcgcggcgatgtctgcctgaagctgttcaat
ctggacccttcccatctgctgcagcagatggctaagagcttccgcagccagattcttttc
tcggcaaccctcacgccgctctcttattaccgggatatgaccggagccaaagaggaggac
tacagccttactgtgccttcgccgttccataaagagcagtgggaggtatcagtgcttccg
gtttccaccagataccgggaacgggaagcctcgctgggcccgctttgtgatgctctgaag
ggaatgacagcccgtaagggcaactatctggtcttcttcccttcgtatgcgtatttgcag
agtgtctatgagctgttcgccgaaaagtatcctgaggtgcctactttggtgcagagcacc
ggaatgagcgagccggagcgggagggcttcctcgcctcgttccgtccggataatccgcag
acactgctcggctttgccgtgctgggcgggatattctcggagggagtggatcttccgggc
gaccggctgaacggcgtaatggtggtaggcgtcggcctgccgcaggtggggcttgagcgt
aatttgctgcgcagctatttccagtccgccggcaagaatggcttcgactacgcctatgtc
tatccgggtatgtgcaaggtgctgcaggcgggaggccggctgatccgaagcgagagcgac
aacggagttattatccttgccgacgaccgttttctccagtatccttaccgccagctgctc
ccggatgaatggcaggactaccttctcatcacgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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