KEGG   PATHWAY: ko05340
Entry
ko05340                     Pathway                                
Name
Primary immunodeficiency
Description
Primary immunodeficiencies (PIs) are a heterogeneous group of disorders, which affect cellular and humoral immunity or non-specific host defense mechanisms mediated by complement proteins, and cells such as phagocytes and natural killer (NK) cells. These disorders of the immune system cause increased susceptibility to infection, autoimmune disease, and malignancy. Most of PIs are due to genetic defects that affect cell maturation or function at different levels during hematopoiesis. Disruption of the cellular immunity is observed in patients with defects in T cells or both T and B cells. These cellular immunodeficiencies comprise 20% of all PIs. Disorders of humoral immunity affect B-cell differentiation and antibody production. They account for 70% of all PIs.
Class
Human Diseases; Immune disease
Pathway map
ko05340  Primary immunodeficiency
ko05340

Disease
H01725  Primary immunodeficiency disease
Orthology
K01488  adenosine deaminase [EC:3.5.4.4]
K05072  interleukin 7 receptor
K05070  interleukin 2 receptor gamma
K11218  Janus kinase 3 [EC:2.7.10.2]
K10887  DNA cross-link repair 1C protein [EC:3.1.-.-]
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
K10988  recombination-activating protein 2
K06450  T-cell surface glycoprotein CD3 delta chain
K06451  T-cell surface glycoprotein CD3 epsilon chain
K06478  receptor-type tyrosine-protein phosphatase C [EC:3.1.3.48]
K06454  T-cell surface glycoprotein CD4
K06458  T-cell surface glycoprotein CD8 alpha chain
K06459  T-cell surface glycoprotein CD8 beta chain
K10603  autoimmune regulator
K05653  ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:7.4.2.14]
K05654  ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:7.4.2.14]
K05856  lymphocyte cell-specific protein tyrosine kinase [EC:2.7.10.2]
K07360  tyrosine-protein kinase ZAP-70 [EC:2.7.10.2]
K08061  regulatory factor X 5
K08063  regulatory factor X-associated protein
K08062  regulatory factor X-associated ankyrin-containing protein
K08060  MHC class II transactivator [EC:2.7.11.1]
K16056  calcium release-activated calcium channel protein 1
K06856  immunoglobulin heavy chain
K06554  immunoglobulin lambda-like polypeptide 1
K06506  CD79A antigen
K07371  B-cell linker protein
K07370  Bruton agammaglobulinemia tyrosine kinase [EC:2.7.10.2]
K07210  inhibitor of nuclear factor kappa-B kinase subunit gamma
K03160  tumor necrosis factor receptor superfamily member 5
K03161  tumor necrosis factor ligand superfamily member 5
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
K10989  activation-induced cytidine deaminase [EC:3.5.4.38]
K06713  inducible T-cell co-stimulator
K05151  tumor necrosis factor receptor superfamily member 13C
K06465  B-lymphocyte antigen CD19
K05150  tumor necrosis factor receptor superfamily member 13B
Reference
  Authors
Cunningham-Rundles C, Ponda PP.
  Title
Molecular defects in T- and B-cell primary immunodeficiency diseases.
  Journal
Nat Rev Immunol 5:880-92 (2005)
DOI:10.1038/nri1713
Reference
  Authors
Ballow M.
  Title
Primary immunodeficiency disorders: antibody deficiency.
  Journal
J Allergy Clin Immunol 109:581-91 (2002)
DOI:10.1067/mai.2002.122466
Reference
  Authors
Marodi L, Notarangelo LD.
  Title
Immunological and genetic bases of new primary immunodeficiencies.
  Journal
Nat Rev Immunol 7:851-61 (2007)
DOI:10.1038/nri2195
Reference
  Authors
Geha RS, Notarangelo LD, Casanova JL, Chapel H, Conley ME, Fischer A, Hammarstrom L, Nonoyama S, Ochs HD, Puck JM, Roifman C, Seger R, Wedgwood J.
  Title
Primary immunodeficiency diseases: an update from the International Union of Immunological Societies Primary Immunodeficiency Diseases Classification Committee.
  Journal
J Allergy Clin Immunol 120:776-94 (2007)
DOI:10.1016/j.jaci.2007.08.053
Reference
  Authors
Fischer A.
  Title
Human primary immunodeficiency diseases.
  Journal
Immunity 27:835-45 (2007)
DOI:10.1016/j.immuni.2007.11.012
Reference
  Authors
Fischer A.
  Title
Human primary immunodeficiency diseases: a perspective.
  Journal
Nat Immunol 5:23-30 (2004)
DOI:10.1038/ni1023
Reference
  Authors
Buckley RH.
  Title
Primary immunodeficiency diseases due to defects in lymphocytes.
  Journal
N Engl J Med 343:1313-24 (2000)
DOI:10.1056/NEJM200011023431806
Reference
  Authors
Fischer A, Le Deist F, Hacein-Bey-Abina S, Andre-Schmutz I, Basile Gde S, de Villartay JP, Cavazzana-Calvo M.
  Title
Severe combined immunodeficiency. A model disease for molecular immunology and therapy.
  Journal
Immunol Rev 203:98-109 (2005)
DOI:10.1111/j.0105-2896.2005.00223.x
Reference
  Authors
de Villartay JP, Fischer A, Durandy A.
  Title
The mechanisms of immune diversification and their disorders.
  Journal
Nat Rev Immunol 3:962-72 (2003)
DOI:10.1038/nri1247
Related
pathway
ko04640  Hematopoietic cell lineage
ko04660  T cell receptor signaling pathway
ko04662  B cell receptor signaling pathway

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