KEGG   PATHWAY: bmy04144
Entry
bmy04144                    Pathway                                
Name
Endocytosis - Brugia malayi (filaria)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
Pathway map
bmy04144  Endocytosis
bmy04144

Other DBs
GO: 0006897
Organism
Brugia malayi (filaria) [GN:bmy]
Gene
BM_BM7308  Bma-arf-6; ADP-ribosylation factor 6, putative [KO:K07941]
BM_BM12216  Bma-pld-1; Phospholipase d protein 1, putative [KO:K01115] [EC:3.1.4.4]
BM_BM9362  Bma-dyn-1.2; Uncharacterized protein [KO:K01528] [EC:3.6.5.5]
BM_BM1908  Bma-dyn-1.1; Dynamin, putative [KO:K01528] [EC:3.6.5.5]
BM_BM13797  Bma-chc-1; putative clathrin heavy chain, putative [KO:K04646]
BM_BM13806  Bma-apa-2; Alpha-adaptin homolog, putative [KO:K11824]
BM_BM13790  Bma-dpy-23; Uncharacterized protein [KO:K11826]
BM_BM13788  Bma-aps-2; clathrin adaptor complex small chain, putative [KO:K11827]
BM_BM12004  Bma-daf-1; Uncharacterized protein [KO:K04674] [EC:2.7.11.30]
BM_BM9173  Bma-daf-8; Uncharacterized protein [KO:K23605]
BM_BM7615  Bma-let-23; Uncharacterized protein [KO:K04361] [EC:2.7.10.1]
BM_BM5061  Bma-sli-1; signal transduction protein CBL-B, putative [KO:K04707] [EC:2.3.2.27]
BM_BM5545  Bma-unc-57; BAR domain containing protein, putative [KO:K11247]
BM_BM4561  Bma-amph-1; Variant SH3 domain containing protein [KO:K12562]
BM_BM5543  Bma-epn-1; Uncharacterized protein [KO:K12471]
BM_BM7644  Bma-ehs-1; EF hand family protein [KO:K12472]
BM_BM4521  Bma-spg-20; Uncharacterized protein [KO:K19366]
BM_BM7183  Bm7183; Uncharacterized protein [KO:K10591] [EC:2.3.2.26]
BM_BM6975  Bma-wwp-1; Uncharacterized protein [KO:K05633] [EC:2.3.2.26]
BM_BM7964  Bma-grk-2; Uncharacterized protein [KO:K00910] [EC:2.7.11.15]
BM_BM4328  Bma-arr-1; Uncharacterized protein [KO:K04439]
BM_BM2051  Bm2051; WH1 domain containing protein [KO:K23612]
BM_BM4867  Bma-arx-2; actin-like protein C, putative,actin-like protein 2, putative [KO:K17260]
BM_BM7036  Bma-arx-1; Arp2/3 complex component protein 1, putative [KO:K18584]
BM_BM13858  Bma-arx-3; Uncharacterized protein [KO:K05757]
BM_BM6289  Bma-arx-4; ARP2/3 complex 34 kDa subunit, putative [KO:K05758]
BM_BM6378  Bma-arx-5; ARP2/3 complex 21 kDa subunit, putative [KO:K05756]
BM_BM2620  Bma-arx-6; ARP2/3 complex 20 kDa subunit, putative [KO:K05755]
BM_BM5034  Bm5034; ARP2/3 complex 16 kDa subunit, putative [KO:K05754]
BM_BM3611  Bma-hsp-1; Uncharacterized protein [KO:K03283]
BM_BM9435  Bm9435; KIAA1033 protein, putative [KO:K18465]
BM_BM5581  Bm5581; Protein KIAA0196, putative [KO:K18464]
BM_BM3041  Bma-cap-1; Uncharacterized protein [KO:K10364]
BM_BM14023  Bma-cap-2; F-actin capping protein beta subunit, putative [KO:K10365]
BM_BM7638  Bma-vps-29; vacuolar protein sorting 29, putative [KO:K18467]
BM_BM5862  Bma-vps-26; vacuolar protein sorting 26 homolog, putative [KO:K18466]
BM_BM4608  Bma-vps-35; Uncharacterized protein [KO:K18468]
BM_BM6210  Bma-snx-3; Sorting nexin 12, putative [KO:K17918]
BM_BM9636  Bm9636; Uncharacterized protein [KO:K11866] [EC:3.4.19.12]
BM_BM13717  Bma-rab-7; ras-related protein Rab-7, putative [KO:K07897]
BM_BM2052  Bma-hgrs-1; VHS domain containing protein [KO:K12182]
BM_BM2596  Bma-stam-1; Uncharacterized protein [KO:K04705]
BM_BM2116  Bma-tsg-101; conserved hypothetical protein,hypothetical protein [KO:K12183]
BM_BM1998  Bma-mvb-12; CG7192-PB, putative [KO:K12186]
BM_BM14040  Bma-vps-28; VPS28 protein homolog, putative [KO:K12184]
BM_BM2435  Bma-vps-22; EAP30 subunit of ELL complex, putative [KO:K12188]
BM_BM3420  Bma-vps-36; Uncharacterized protein [KO:K12190]
BM_BM6114  Bma-vps-25; GCD14 protein, putative [KO:K12189]
BM_BM6971  Bma-vps-20; FLJ11749-like, putative [KO:K12195]
BM_BM2970  Bma-vps-32.1; Uncharacterized protein [KO:K12194]
BM_BM14032  Bma-vps-24; SNF7 family protein [KO:K12193]
BM_BM6583  Bma-vps-2; SNF7 family protein [KO:K12191]
BM_BM5977  Bm5977; Uncharacterized protein [KO:K15053]
BM_BM14033  Bma-did-2; RIKEN cDNA 2610002M06, putative [KO:K12197]
BM_BM3997  Bma-vps-60; Uncharacterized protein [KO:K12198]
BM_BM4982  Bma-istr-1; Uncharacterized protein [KO:K19476]
BM_BM5333  Bm5333; Uncharacterized protein [KO:K12200]
BM_BM1971  Bma-snx-1; PX domain containing protein [KO:K17917]
BM_BM7182  Bma-src-1; SRC-1, putative [KO:K05704] [EC:2.7.10.2]
BM_BM6727  Bm6727; RAS-like GTP-binding protein RhoA, putative [KO:K04513]
BM_BM10155  Bma-rho-1.1; RAS-like GTP-binding protein RhoA, putative [KO:K04513]
BM_BM9534  Bma-rho-1.2; Uncharacterized protein [KO:K04513]
BM_BM5771  Bma-cav-1; Uncharacterized protein [KO:K06278]
BM_BM13659  Bma-rab-5.1; Ras-related protein Rab-5B, putative [KO:K07888]
BM_BM3130  Bma-rabn-5; FYVE zinc finger family protein [KO:K12480]
BM_BM6531  Bma-rabs-5; Uncharacterized protein [KO:K12481]
BM_BM10133  Bm10133; FYVE zinc finger family protein [KO:K12482]
BM_BM13828  Bma-vps-45; Uncharacterized protein [KO:K12479]
BM_BM5972  Bma-rab-10; Uncharacterized protein [KO:K07903]
BM_BM3010  Bma-rab-8; Uncharacterized protein [KO:K07901]
BM_BM4761  Bm4761; Uncharacterized protein [KO:K07901]
BM_BM6601  Bma-rab-35; Uncharacterized protein [KO:K07876]
BM_BM4321  Bm4321; Ras-related protein Rab-11B, putative [KO:K07905]
BM_BM16923  Bma-unc-116; Uncharacterized protein [KO:K10396]
BM_BM4422  Bma-rfip-1; Uncharacterized protein [KO:K12485]
BM_BM6028  Bma-par-6; Uncharacterized protein [KO:K06093]
BM_BM3221  Bma-pkc-3; protein kinase C3,putative [KO:K06069] [EC:2.7.11.13]
BM_BM5286  Bma-cdc-42; GTP-binding protein, putative [KO:K04393]
BM_BM3370  Bma-git-1; Uncharacterized protein [KO:K12487]
BM_BM8154  Bm8154; GTP-ase activating protein for Arf containing protein [KO:K12488]
BM_BM6306  Bma-cnt-1; GTP-ase activating protein for Arf containing protein [KO:K12489]
BM_BM4753  Bm4753; GTP-ase activating protein for Arf containing protein [KO:K12492]
BM_BM3172  Bm3172; Uncharacterized protein [KO:K12493]
BM_BM5066  Bma-bris-1; loner ISO1, putative [KO:K12495]
BM_BM4843  Bma-grp-1; Uncharacterized protein [KO:K18441]
BM_BM12093  Bma-agef-1; symbol, putative [KO:K18442]
BM_BM2350  Bma-gbf-1; Sec7 domain containing protein [KO:K18443]
BM_BM4102  Bma-arf-1.2; ADP-ribosylation factor 1, putative [KO:K07937]
BM_BM4531  Bma-arf-3; Uncharacterized protein [KO:K07939]
Compound
C00035  GDP
C00044  GTP
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637  1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981  Phosphatidylinositol-3,4,5-trisphosphate
C11556  1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
  Authors
Acconcia F, Sigismund S, Polo S
  Title
Ubiquitin in trafficking: the network at work.
  Journal
Exp Cell Res 315:1610-8 (2009)
DOI:10.1016/j.yexcr.2008.10.014
Reference
  Authors
Donaldson JG, Porat-Shliom N, Cohen LA
  Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
  Journal
Cell Signal 21:1-6 (2009)
DOI:10.1016/j.cellsig.2008.06.020
Reference
  Authors
Sorkin A
  Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
  Journal
Curr Opin Cell Biol 16:392-9 (2004)
DOI:10.1016/j.ceb.2004.06.001
Reference
  Authors
Raiborg C, Stenmark H
  Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
  Journal
Nature 458:445-52 (2009)
DOI:10.1038/nature07961
Reference
  Authors
Scita G, Di Fiore PP
  Title
The endocytic matrix.
  Journal
Nature 463:464-73 (2010)
DOI:10.1038/nature08910
Reference
  Authors
Le Roy C, Wrana JL
  Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
  Journal
Nat Rev Mol Cell Biol 6:112-26 (2005)
DOI:10.1038/nrm1571
Reference
  Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
  Title
The early endosome: a busy sorting station for proteins at the crossroads.
  Journal
Histol Histopathol 25:99-112 (2010)
DOI:10.14670/HH-25.99
Reference
  Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
  Title
Viral entry, lipid rafts and caveosomes.
  Journal
Ann Med 37:394-403 (2005)
DOI:10.1080/07853890510011976
Reference
  Authors
Grant BD, Donaldson JG
  Title
Pathways and mechanisms of endocytic recycling.
  Journal
Nat Rev Mol Cell Biol 10:597-608 (2009)
DOI:10.1038/nrm2755
Reference
  Authors
Cullen PJ, Korswagen HC
  Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
  Journal
Nat Cell Biol 14:29-37 (2012)
DOI:10.1038/ncb2374
Related
pathway
bmy04070  Phosphatidylinositol signaling system
bmy04130  SNARE interactions in vesicular transport
bmy04142  Lysosome
bmy04350  TGF-beta signaling pathway
KO pathway
ko04144   

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