KEGG   PATHWAY: smm04120
Entry
smm04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Schistosoma mansoni
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
smm04120  Ubiquitin mediated proteolysis
smm04120

Other DBs
GO: 0016567
Organism
Schistosoma mansoni [GN:smm]
Gene
Smp_089430  ubiquitin (ribosomal protein L40), putative [KO:K02927]
Smp_017280  putative ubiquitin [KO:K02977]
Smp_026540  putative clathrin coat associated protein ap-50 [KO:K03178] [EC:6.2.1.45]
Smp_162630.1  putative ubiquitin-activating enzyme e1 [KO:K03178] [EC:6.2.1.45]
Smp_048760.1  putative sumo-1-activating enzyme E1a [KO:K10684] [EC:6.2.1.45]
Smp_166220  ubiquitin-activating enzyme E1b, putative [KO:K10685] [EC:6.2.1.45]
Smp_211070  ubiquitin-activating enzyme E1C, putative [KO:K10686] [EC:6.2.1.64]
Smp_118220  putative ubiquitin-conjugating enzyme rad6 [KO:K10573] [EC:2.3.2.23]
Smp_169440  ubiquitin-conjugating enzyme rad6, putative [KO:K10573] [EC:2.3.2.23]
Smp_051010  putative ubiquitin-conjugating enzyme E2 C [KO:K06688] [EC:2.3.2.23]
Smp_067980.1  ubiquitin conjugating enzyme E2, putative [KO:K06689] [EC:2.3.2.23]
Smp_067990.1  ubiquitin conjugating enzyme E2, putative [KO:K06689] [EC:2.3.2.23]
Smp_068000  ubiquitin conjugating enzyme E2, putative [KO:K06689] [EC:2.3.2.23]
Smp_055920  putative ubiquitin conjugating enzyme E2 [KO:K20217] [EC:2.3.2.23]
Smp_027370  putative nedd8-conjugating enzyme nce2 [KO:K10687] [EC:2.3.2.34]
Smp_028100.1  putative ubiquitin-conjugating enzyme E2 G [KO:K10575] [EC:2.3.2.23]
Smp_041390  ubiquitin-conjugating enzyme E2 G, putative [KO:K04555] [EC:2.3.2.23]
Smp_145350  putative ubiquitin-conjugating enzyme h [KO:K10576] [EC:2.3.2.23]
Smp_103710  putative ubiquitin-conjugating enzyme E2 I [KO:K10577]
Smp_174670  putative non-canonical ubiquitin conjugating enzyme [KO:K10578] [EC:2.3.2.23]
Smp_059750.1  ubiquitin-conjugating enzyme E2 j2, putative [KO:K04554] [EC:2.3.2.23]
Smp_082050  putative ubiquitin-conjugating enzyme E2-25kD [KO:K04649] [EC:2.3.2.23]
Smp_004350  ubiquitin-conjugating enzyme E2 l, putative [KO:K04552] [EC:2.3.2.23]
Smp_083400  ubiquitin conjugating enzyme 13, putative [KO:K10580] [EC:2.3.2.23]
Smp_007770  ubiquitin-conjugating enzyme-related [KO:K10581] [EC:2.3.2.24]
Smp_029940.1  putative ubiquitin conjugating enzyme [KO:K10582] [EC:2.3.2.23]
Smp_055960  putative ubiquitin-conjugating enzyme E2r [KO:K02207] [EC:2.3.2.23]
Smp_180170  ubiquitin-conjugating enzyme e2S, putative [KO:K10583] [EC:2.3.2.23]
Smp_083030  putative inhibitor of apoptosis (iap) domain family member [KO:K10585] [EC:2.3.2.23]
Smp_159540  putative inhibitor of apoptosis (iap) domain family member [KO:K10586] [EC:2.3.2.23]
Smp_137040  putative ubiquitin-protein ligase [KO:K10588] [EC:2.3.2.26]
Smp_123180  nedd-4-like E3 ubiquitin-protein ligase [KO:K05633] [EC:2.3.2.26]
Smp_165260  nedd-4-like E3 ubiquitin-protein ligase [KO:K05633] [EC:2.3.2.26]
Smp_172420  putative ubiquitin protein ligase E3a [KO:K10590] [EC:2.3.2.26]
Smp_207020  putative e3 ubiquitin-protein ligase nedd-4 [KO:K10591] [EC:2.3.2.26]
Smp_150360  putative ubiquitin--protein ligase edd [KO:K10593] [EC:2.3.2.26]
Smp_142890  putative hect E3 ubiquitin ligase [KO:K10615] [EC:2.3.2.26]
Smp_030780  putative ubiquitination factor E4a [KO:K10596] [EC:2.3.2.27]
Smp_021160.1  putative peptidyl-prolyl cis-trans isomerase [KO:K10598] [EC:5.2.1.8]
Smp_167150  putative wd-repeat protein [KO:K10599] [EC:2.3.2.27]
Smp_005020  putative cbl [KO:K04707] [EC:2.3.2.27]
Smp_000650  ubiquitin ligase sina (ec 6.3.2.-) (seven in absentia homolog)(smsina) [KO:K04506] [EC:2.3.2.27]
Smp_050380  protein kinase [KO:K04416] [EC:2.7.11.25]
Smp_172130  putative sumo ligase [KO:K04706] [EC:2.3.2.-]
Smp_157360  putative synoviolin [KO:K10601] [EC:2.3.2.27]
Smp_132510  putative breast cancer type 1 susceptibility protein brca1 [KO:K10605] [EC:2.3.2.27]
Smp_147520  putative tripartite motif protein [KO:K10608] [EC:2.3.2.27]
Smp_052910  skp1-related [KO:K03094]
Smp_099930  putative f-box and wd40 domain protein [KO:K03362]
Smp_030320  putative f-box protein FBW7 (fragment) [KO:K10260]
Smp_079740  putative cullin-2 (cul-2) [KO:K03870]
Smp_009320.1  hypothetical protein [KO:K03872]
Smp_072380  putative elongin B [KO:K03873]
Smp_031000.1  putative cullin [KO:K03869]
Smp_085380  kelch-like ech-associated protein [KO:K10456]
Smp_082850.1  putative cullin [KO:K10609]
Smp_175430  putative dna repair protein xp-E [KO:K10610]
Smp_143030  putative cullin [KO:K10612]
Smp_028430  Anaphase promoting complex subunit 11 homolog [KO:K03358]
Smp_152400  putative anaphase-promoting complex subunit [KO:K03349]
Smp_004060  putative cell division cycle 20 (cdc20) (fizzy) [KO:K03363]
Smp_132020  cell division cycle 20 (fizzy)-related [KO:K03364]
Smp_151380  meiotic checkpoint regulator cut4, putative [KO:K03348]
Smp_134020  putative cell division cycle [KO:K03350]
Smp_036930  hypothetical protein [KO:K03352]
Smp_070690  putative cell division cycle [KO:K03353]
Smp_037400  putative cell division cycle [KO:K03355]
Smp_210460  putative tbc1 domain family member [KO:K03357]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
smm03050  Proteasome
KO pathway
ko04120   

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