KEGG   Prunus avium (sweet cherry): 110750785
Entry
110750785         CDS       T05161                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110750785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110750785
   03009 Ribosome biogenesis [BR:pavi03009]
    110750785
Enzymes [BR:pavi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110750785
Spliceosome [BR:pavi03041]
 Complex A
  U1 snRNP components
   U1 related factors
    110750785
 Complex B
    110750785
Ribosome biogenesis [BR:pavi03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110750785
SSDB
Motif
Pfam: DEAD Helicase_C ResIII SNF2-rel_dom AAA_22 Terminase_6N
Other DBs
NCBI-GeneID: 110750785
NCBI-ProteinID: XP_021806842
UniProt: A0A6P5RW82
Position
Unknown
AA seq 570 aa
MSYVPPHLRSSSTTTTTTTTTETSSVTLDDQTKLSYPSSNSHFNNDKSSAASFSSFSHSN
ASRWSSGAISTANRALARPDTVVPQWKPSERVLRMKPELIEEVCLRLNLDVSVSPDSAPA
PAPIESFADMCLHPSIMKDIAYHGYTTPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFA
IPMIQHCLAQPPVQRGDGPLALVLAPTRELAQQIEKEVKAFSKSLESFRTAIVVGGTNIA
EQRSELRAGVDVVVATPGRFIDHLQQGNTSVTRISFVVLDEADRMLDMGFEPQIREVMRN
LSEKHQTLLFSATMPEEIEELAQEYLTNPVQVKVGKVSSPTANVTQTLEKVSESEKTDRL
LALLVEEASRVERAGHPFPLTIVFVERKTRCDEVADALVAQGLHAVALHGGRTQGEREAA
LREFRKGTTNILVATDVASRGLDVSGVAHVINLDLPKSMEDYVHRIGRTGRAGSMGQATS
FYTDRDMFLVANIKKAIADVGSGNAVAFATGKTARRKEREAAAAQKQARVALSKCSITGP
TSVNIEDKYRFMIADSNSKREGAADSAWDD
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtcgtatgtgcctccacacctaaggtcaagctcaacgaccaccacaaccaccaccacc
acagaaacctcatctgtaaccctagacgatcagaccaagctctcgtacccctcctccaac
tctcacttcaacaacgacaagtcgtccgctgcttccttctccagcttctcgcactccaat
gcctcccgctggagctccggcgctatctccaccgccaacagagctctcgcacggcccgac
accgtcgtccctcagtggaagccctccgaacgcgtcctccgcatgaagcctgaactgatt
gaagaggtttgtttgcggcttaatttggatgtttctgttagtccggactctgctcctgct
ccagcaccgattgagtcatttgcagatatgtgtttgcaccctagcatcatgaaagatatt
gcataccatggatacaccacgccaacatccattcaggctcaagccatgccagttgccctc
agtgggagggacctattaggttgtgctgaaactggcagcgggaaaacggctgcatttgcc
atcccaatgatacagcattgcttggctcaacctcctgttcaacgtggtgatggaccacta
gctttggtattggccccgactagagagcttgcccaacaaatagaaaaagaggtcaaagct
tttagtaaatctcttgagtccttcagaactgccatagttgtgggtggaaccaacatagct
gagcagaggtctgagctacgagcaggagttgatgtggtggttgctactcctggacgattt
atagatcatttacaacaagggaatacttccgtcactagaatttcatttgttgttctggat
gaggctgacaggatgcttgacatgggttttgaaccacagataagagaggtgatgcggaac
ctttctgaaaagcaccaaactttgctatttagtgcaactatgcctgaagagatcgaagaa
ttagcccaggaatacttaactaacccagtgcaagtgaaggtgggaaaagtgagtagcccc
acagcaaatgtaactcagactttggagaaggtttctgagagtgagaagactgataggctt
ttggctttgctcgtagaggaggcatctcgggttgaaagagctggccatccctttccctta
actatcgtatttgttgaaaggaagacaagatgtgacgaagttgctgatgccttggtagca
caagggttgcatgcagttgctcttcatggtggtcgtactcagggtgaaagagaggctgct
ctacgtgaatttagaaaaggcactaccaatattttggttgccactgatgttgcatctcgt
ggtttggatgtctcaggagttgctcatgttatcaatttggatcttccaaagagcatggaa
gattatgtacaccggattggaaggacgggaagagcaggatcaatgggacaagctacttcc
ttttacactgatcgtgatatgttccttgtggcaaatataaagaaagcaattgcagatgtt
ggatctggaaatgctgtggcttttgcaactgggaagactgcaagaaggaaagagagagaa
gcagcagctgctcaaaagcaagctagggttgctctatcaaagtgctcaataacgggaccc
acatccgtaaacattgaggacaagtataggttcatgattgctgattccaacagtaaaaga
gaaggtgctgcagatagtgcttgggacgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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