KEGG   Pogonomyrmex barbatus (red harvester ant): 105432231
Entry
105432231         CDS       T04903                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein PF11_0213-like
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
Organism
pbar  Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:pbar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbar03041]
    105432231
Enzymes [BR:pbar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105432231
Spliceosome [BR:pbar03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    105432231
SSDB
Motif
Pfam: DEAD Helicase_C AAA_19 Helicase_RecD
Other DBs
NCBI-GeneID: 105432231
NCBI-ProteinID: XP_011645243
Position
Unknown
AA seq 1273 aa
MAQYIAHDINTKQRTNDIKIEEDVTFVQMRLLQEILDGLMFAGFQKPSPIQLKAIPLGRC
GFDLIIRAKSGTGKTVVFGVIALETIDVSQQLPQVLIVAPTREIAIQITNVLKTIGSKIE
GLKTEHFVGGISLEEDKKXLSKCHIAVGAPGRLKHLIEKGFLQVSKYSYIFSKLPSSKQV
IASSATYPGDLETFLQTYMSSPILTSPNIDGPILIGIKQFVTVVPVHPNAMKQVQIKVDE
LVKIFTKIPFKQSLVFSNYQSRAQSISNKINSLGFSSTYIVGNQDMTKRLGAIEKLRNLE
CRIMLTTDLTARGIDIENINMVINLDIPTDPATYLHRIGRAGRYGSHGISITIVSESEFS
SFRELLTLIGGPNFYLFKLSSDYAEDVWAGDTATFEKIYSGPDKNVTKVPVIDKEILNSE
NGIPITISISEHISSVNSDASLKNVKNTSTIKHEQGNNISPKSTASNDILSSEDVTITRY
DKSESVSPKYTASNDILLSKKNIANTVKMKHKKCNSTSPKNKKCHKSIDNICAKSNEKIS
ISSLCQRYDWDKYNFIINTSKEHNKEVINSTMESIANISEESKVSIIDAPDDFDDVSFIE
KLNKDITFAINLSNVNDYKLSDADVEDVIQYMKNSLIEKEENDEIKQEENILSKYDKEDD
NEKISTQISQDTNDSDLSTKNSNLLYYSLPISKSDNKEDKQIWEVLNNFLLIYAKRINES
DNNICNDEESLLRIASKWKEILNFEINLLDKRYKGMTDPIHKLVYEEHFLAFKTFFNVQK
RALLCIFPQIRNDEEVQDTYTYSGSNSNNNLLDMYKEIEDFKSHYYILGTKFNAFFPYPI
NIDDYMPNLMMSDTEIEEYRKALQYLRTYQDPNEKLLEIIDYTASLNKIEKYDLFQKIKE
QNLSFTDMKILLKETAEKNVKAEKLTKDLQLFENLVSLENNELTEQTEVFEEPISLENQD
DDAVQFQKNAKVDIPIINVSGKDSTKEVQEIQFNKVTVIDQNKHAQNTKCNVSINASTDQ
KTKKXVEQTDEEGNEKICNVSSKLSSEKDLAQHTDTVAVNNRQKVSPDSSNIQKSNRKNI
NHSKVQNLQTKYAPIQTNNIVYNNIDMFAKTDKYVNSHKYDPKDNADTSNSMAFAQDSRI
LNSRANVNARKTPRSSLNSAQNFRSRNVNSNLSNKPLEASLNQIHHDQWSGHAAAYPYSS
YTYTQSSLFNPQYLEHEIENYSTNLTHGLGNDLANDSYKTDIDRFLSSLRMQTNRVHLEL
YKSQMFENWSAYD
NT seq 3822 nt   +upstreamnt  +downstreamnt
atggctcaatatattgcgcatgatataaatacaaaacagcggacgaatgatattaaaata
gaagaagatgttacatttgttcaaatgcgacttttacaagaaattttggatgggttaatg
tttgctggatttcaaaaaccatctcccatccaattgaaagccattccattaggccgttgc
ggatttgatttgataatacgtgcaaaatcaggtactggaaaaactgtagtatttggtgta
atagctcttgaaactatagatgtttcgcaacaattgccacaagttttaatagtagcacct
acaagagagattgctattcaaataaccaatgttcttaaaacaataggttcaaaaatagaa
ggattaaaaacggaacattttgttggaggaatatcattagaagaagataaaaaanagttg
agcaaatgtcacatagctgttggtgcaccaggtagacttaaacacttaattgaaaaggga
tttcttcaagtatccaaatatagctacatattttctaaattaccatctagtaagcaagtt
atagcctcaagtgctacttatcctggagatttagaaacatttctacaaacttatatgtct
tctccaatattgacatcgccaaatattgatgggccaattttgattggaatcaaacaattt
gtgactgtggttccagtacatcccaatgcgatgaaacaggtacaaataaaagttgatgag
ctagtaaaaatctttaccaagattccatttaaacaaagcctagtcttttcaaattatcaa
tcacgagctcaatcgattagcaataaaattaattctttgggtttctcatcgacatatatt
gttggaaatcaagatatgactaaaagattaggagcaattgaaaagttaagaaatttggaa
tgtagaattatgttgaccacagatttaactgcaagaggtatagatattgaaaatattaat
atggtcatcaatttagacatacctacggatccagcaacatatttacacagaattggcaga
gctggtcgctatggatctcatggaatttctattacaattgtttctgaaagtgaattttcg
tcgtttagggaattattgactttgatcggtggaccgaatttttatttgtttaagctcagt
tctgattatgcagaagatgtttgggctggtgatactgcaacatttgaaaagatttattca
ggacctgataaaaatgtcacaaaggttccagtcattgataaagaaattcttaattctgaa
aatggtatacctataacaatatctatatcagaacatatatcttcagtaaatagtgatgca
tcattaaaaaatgttaaaaatacttctactataaaacatgaacaaggtaacaatatttca
cccaagagtacagcaagcaatgatattttatcatcagaagatgttactattacgagatat
gacaaatctgaaagtgtttcaccgaaatatacagcatctaatgatatattattatcaaag
aaaaatattgcaaatactgttaaaatgaaacataaaaaatgcaatagtacttcaccaaaa
aacaaaaaatgtcataaaagcattgataatatatgtgcaaaatctaatgagaaaataagt
attagttctttatgtcaacgttatgattgggacaaatataattttataattaatacttcg
aaagaacataataaagaagttattaactcaactatggaatctatagctaacatttcagaa
gagagtaaagtatcaattatagatgcgcctgatgattttgatgatgtttctttcatagaa
aaattgaataaagatattacttttgcaataaatctgtcaaatgtaaatgattataaatta
tcagatgctgatgttgaagatgttattcagtacatgaagaattcattaattgaaaaagaa
gagaatgacgaaatcaaacaagaagaaaatatactctctaagtatgataaagaggatgac
aacgaaaaaatttccacacaaatttctcaggatacaaatgattctgatctttctacaaaa
aattctaatttgctatattatagtttacctataagtaaatcggataataaagaagataag
caaatatgggaagtgttaaacaatttcttattaatatatgctaaaagaattaacgaaagt
gataataatatttgtaatgatgaagaatctctcttgagaatagcttccaaatggaaagaa
atacttaattttgaaataaatttattagataagaggtacaaaggcatgactgatcctatt
cataaattagtatatgaagaacattttctagctttcaaaactttttttaatgtgcaaaaa
cgggctttattatgtatttttccacaaattcgtaatgacgaagaagtacaggatacttat
acatattcaggatctaattcaaataataatttattagatatgtacaaagaaatagaagat
ttcaaaagtcattattatattttaggaactaaatttaatgcattttttccatatcctata
aatattgatgattatatgccaaatttaatgatgtcagacaccgagattgaagaatatcgc
aaagctttgcaatatcttagaacttatcaagatcccaatgagaaattattggaaataata
gattatacggcatctctgaataaaattgaaaaatatgatttattccaaaaaataaaagaa
caaaatttgtcattcacggatatgaaaatactccttaaagaaacagcagaaaaaaatgta
aaagctgaaaaattaacaaaggatttacaattgttcgaaaatctagtctctttggaaaat
aacgaactgactgagcaaacagaagtgttcgaggagccgatatctttggaaaatcaagat
gatgacgcagttcaattccagaaaaatgcaaaagtggatattccaatcataaatgtaagc
ggaaaagattcaacaaaggaagtgcaggaaattcagtttaataaagttacagttatcgat
caaaataagcatgcacaaaatacgaaatgtaatgtttctattaatgcaagcactgatcaa
aaaacaaaaaaanaagttgaacaaacggatgaagaaggtaatgaaaaaatatgtaatgtt
tcaagcaaattgtcatctgagaaagatcttgcacaacatactgatacagttgcagtgaat
aatcgacagaaagtctcgcccgatagtagcaatatccaaaagtctaacagaaagaacatt
aatcatagtaaagttcaaaatttgcaaactaaatatgcacctatacaaacgaataatatt
gtttacaataatatcgatatgtttgccaaaaccgataaatatgtaaattctcataaatat
gatccaaaggacaatgcagatacaagtaactcaatggcctttgcacaagattcacgaata
ttaaattcacgtgcaaatgtaaatgcaaggaaaactcctcgatcttcactgaattcagcg
caaaactttcggtcacgaaacgtaaattctaatttatcaaataaaccattggaagcgtcg
ttaaatcaaatccatcatgatcaatggagcggacatgcagcagcgtatccctactcttca
tatacatacacccaatcatcactatttaatccacaatacttggaacatgaaatcgaaaat
tattctacaaatttgactcacggattaggtaatgatttagcaaatgactcgtataaaacg
gatattgatagattcttatcatcgttgagaatgcagacgaatcgggtgcatctcgagctt
tataaatcacaaatgttcgaaaattggagtgcgtatgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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