KEGG   Rubinisphaera brasiliensis: Plabr_1141
Entry
Plabr_1141        CDS       T01431                                 
Name
(GenBank) Exodeoxyribonuclease V
Organism
pbs  Rubinisphaera brasiliensis
Pathway
pbs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Plabr_1141
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 AAA_11 AAA_22 PIF1 SH3_13 Helicase_RecD HHH_4 AAA_16 AAA_5 nSTAND3
Other DBs
NCBI-ProteinID: ADY58757
UniProt: F0SKT7
Position
complement(1327774..1331334)
AA seq 1186 aa
MTTHLSARLVWHDRGWDGRICDCPSKNSSCMVHRHIREAPRDDEREDCAAGELLNSLDGW
QPPCSRDPIAFAPDGYTITHYDPIDGRNLPAVQEEIPPYSFCPSPYRWMREENFRQLCED
ENLNIRGPEDIKKTKGWVYEPERQIALLNAFWGKLERESSLVFFYCNHGNPIDDQIGRLL
VGVGRISDIHPQMYFGEVDVVRPEEQPVWSRCITHDFENQGFRLPYQEYLNGGHDPSGIL
CPVPEGAKSSFSFVSEHVTDDVAVGVLERLLQSLQAVKDEGKVAGDWENHLTWLNDVLGE
VWTNRGPFPGIGSVLEFLGCTSGTAFHRQVLAPRFRAGENAWEYVHSVLNGETKCEEPRY
ENGLTQAAGRWSSYQPVRRELLEFLTRFELTPQQVKRVANTNLRAKAGIDATDEQIIANP
YLLSEMDQGGADSEAITLEAIDRGMRPEGEAAHFIKADAICAQDDPRRVRATAASVLNLA
AVQGDTLLPFNETLNRIEERFPERRTCTPDPDLVAGQAAFYQELLDYQVEDEHPTFAIKN
LADVEAEVRSRLKRLVKRTNDPPRKGWDWKSLLQQEFGEGGTDLPAEVEERAQAEKALAL
ATLYERRFSILTGRAGTGKTSVLKVFLKGLEELHGKRPLLLLAPTGKARVRLMDRTKRED
GSVRDAYTIHQFLMRHDWLNPETFSLRFQGGNQRGTPTVIIDEASMIPMDLFGVLFRALD
LNKVSRLILVGDPNQLPPIGPGRPFVDIIAWLEQSEDRQQCLAKLTERARHEDHNSLALQ
LADGYLREDPSPDDDALLSRAARQDVGGDLEVHFWNDNRQMEQILGARMKVLLGVDDTSD
AYASLNKSLGVADTNRPEPTHAEHWQILSPVRNHEFGTIELNRKVQQKFRGGLLARKGYA
KPFGEERIVWTDKVMQTFNRGMKGWPHNTGIDYVANGEIGLVTYTHQKYLDVKYSTQPDV
SYRYFRSDVDANLELAYALTVHKSQGSDFDIVFFILPATAATLSRELLYTGLTRFRKKIV
LLIERDTKVLETLRNPQASDTLLRNTNLFVKAVRPEGVESYLPSHLIHRTSSGILVRSKS
EVIVADTLTRLGISYEYEQKLTSKDDPNDFRLPDFTVSFEGDTFYWEHLGMLSVPSYREQ
WDRKRQWYEDNRYLDRLITSEDGSDGSINAAEIEQTARKQILLEDE
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgacgactcacttgtctgctcgactcgtctggcacgaccgaggatgggatggtcgcatc
tgcgactgtccgagtaagaactcgtcgtgcatggttcaccgtcacattcgagaagcaccg
agagatgatgagcgagaggattgcgctgctggcgaactgctgaactcactcgatggttgg
cagccgccctgttctcgtgacccaatcgcctttgcgccagatggctacacgatcactcat
tacgatccgattgacggtcgtaaccttcctgccgttcaagaggaaatcccaccgtactcg
ttttgtccctcgccctatcgctggatgagggaagagaattttcggcagctttgcgaagac
gagaatctcaacattcgtggccccgaagacattaagaagacgaaggggtgggtctacgaa
ccagaacggcaaatcgctttgctcaacgcattctggggcaaactagaacgagagtcgtct
ctcgtcttcttctactgcaaccacggcaacccaatcgacgatcaaattggtcggctgctg
gtcggagttggacggatttccgacattcacccgcagatgtacttcggagaagtagacgtt
gtgcgccccgaggagcagcccgtctggtcccgttgcattacacatgatttcgagaatcag
gggtttcgtcttccgtaccaagagtatctgaatggtgggcatgacccatcaggcattctc
tgccctgtcccggaaggagcgaagtcgagcttttcattcgtttctgagcatgtgacagac
gacgtggcggtcggagtccttgagcgtctgctgcaatctctccaagcagtgaaggatgaa
gggaaagttgcaggcgattgggagaatcatctgacatggctcaatgatgtgctgggtgag
gtctggacaaacagaggtccatttcccggcattggcagtgtccttgagtttctgggttgt
acctcgggaacggcctttcaccgtcaagtcctagcgcctcgctttcgagccggggagaac
gcatgggaatatgtgcattcagttctcaacggtgaaacgaagtgtgaagagccacgttac
gaaaatggtctgactcaagctgcgggacggtggagttcctaccagccggttcgccgggaa
ctcttggagtttctgactcgtttcgagcttacgccgcagcaagtgaaacgtgttgccaac
acgaacctccgtgcaaaagctgggattgatgcaaccgacgagcagatcattgcgaacccc
tacctactctccgagatggatcagggtggagcagactccgaggccattactcttgaggcg
attgatcgtggaatgcggcccgagggggaggcggcgcactttatcaaagccgatgccatc
tgcgctcaagatgaccctcgccgagttcgagcaaccgctgcttccgtattgaatttggcg
gcggttcagggcgacacattgttgcctttcaacgaaacgctgaatcgaatcgaggagcga
ttccccgagcgtcgaacttgcacgcccgatccagaccttgttgcaggtcaagctgccttt
tatcaggagcttctggattatcaggtggaagatgaacacccgacgtttgcgatcaagaac
ttggccgatgtggaagccgaagtccgcagccgactcaaacgtctggtgaaacgaaccaat
gaccctccacgcaaggggtgggactggaagtcgttacttcaacaagaatttggggaaggc
ggcactgacctaccagcagaagtggaggaacgtgcgcaggcagagaaggctctggcgctc
gctacgctgtatgagcgacgtttcagcatccttacgggacgtgctggtacgggaaaaacc
agtgtcctcaaagtctttctgaaaggactggaagaactgcacggcaagcggccactcctc
ctacttgctccgaccggcaaagcccgtgtgcgattgatggatcgcaccaagcgggaagac
gggtcagtccgagatgcgtacacaattcaccagttcttgatgcgccacgactggttgaat
cccgagacattctcactgcgttttcagggcggtaaccagcgtggaactcctaccgttatc
atcgacgaggcatcgatgatcccgatggacctgttcggcgtgctgttccgagcgctggac
ctcaacaaagtctctcgcttgattcttgttggcgatccaaatcagttgcccccgattggc
cccggtcggcccttcgtggacatcatagcttggctcgaacagagtgaagacaggcaacaa
tgtctggcgaagctgacagaacgagcgaggcacgaggaccacaacagtctagcgctgcaa
ctcgcagacggttatttgcgtgaagacccgtcgccagatgacgacgctcttctatcgaga
gcggcaagacaagatgtcggtggcgacctagaggttcacttctggaacgacaaccggcag
atggagcagattctcggcgcacgcatgaaagtgcttcttggcgtcgatgatacgtccgac
gcttacgcatcgttgaacaagagtctgggcgttgccgacacgaatcgcccggagccgaca
cacgctgagcattggcaaattctcagtccagtgcgtaatcacgagtttggaacaatcgag
ttgaatcggaaggttcaacagaagtttcgaggcggactgctcgccagaaagggatatgcc
aagccctttggcgaagaacggatcgtctggactgacaaggtgatgcaaacattcaatcgg
ggaatgaagggttggccgcacaatacgggcattgactacgttgccaacggcgagattgga
ctggtgacgtacacgcaccagaagtacctcgacgtgaaatactcgactcaaccggacgtt
tcgtatcgatactttcgcagcgacgtggatgcgaaccttgaactcgcctatgccttgacc
gttcacaagtcgcaaggcagcgatttcgacatcgtattcttcatcctccccgccaccgca
gccacgttgtcacgggaattgctctacacgggactgacacgctttcgcaagaagatcgtt
cttctcattgaacgagacacgaaggtgctggagacgctccgcaatccacaggcatccgac
acgctcctccgaaataccaacctctttgtgaaagctgttcgcccggaaggtgttgagagt
taccttccgagccatctcatccatcgaacctcatccgggattctggtgcggtcgaagtcg
gaagtgatcgtggccgacacgctgacccgactggggatcagctatgagtacgagcagaag
ctcacgtcgaaggacgatcccaacgacttccgcctgcctgacttcaccgtcagcttcgag
ggcgacacgttctattgggaacacttgggaatgttgtcggtgccgtcgtatcgtgagcaa
tgggatcgcaaacggcagtggtacgaagacaatcgctatctggatcggctgattacgtcg
gaggacggatcagacggcagcatcaacgccgccgagatcgagcagacagcacgcaaacaa
attcttctggaagatgagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (40)   

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