KEGG   Physeter catodon (sperm whale): 102974251
Entry
102974251         CDS       T06011                                 
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
  KO
K04841  voltage-gated sodium channel type IX alpha
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    102974251 (SCN9A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pcad04040]
    102974251 (SCN9A)
Ion channels [BR:pcad04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102974251 (SCN9A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein Toxin_22 DUF6739
Other DBs
NCBI-GeneID: 102974251
NCBI-ProteinID: XP_023977976
Ensembl: ENSPCTG00005002310
UniProt: A0A2Y9SH10
Position
2:complement(72043997..72201900)
AA seq 1987 aa
MAMLPPPGPQSFVYFTKQSLALIEQRIAEGKTKEPKEEKKDDDDEGPKPSSDLEAGKQLP
FIYGDIPQGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCMRTPLENNETIESILNTLDEEDYGK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGRNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIALAAAEYTSIERSRIMGLSESSSETSKLSSKSAKERRNRRR
KKNQKKLSIGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRALEKRLSTPNQSPLSIHG
SSFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNRKMHCAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTN
NQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKQLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKYVLTVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYMKQTLREFILKAFSTKPKIS
KEIRRTEDLNFKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESECQSFIH
NPSLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNGSSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRLPCCQVNTESGKGRIWWNIRKTCYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYQCVNTTDGSPFPTSEVENRSECFALMNVSQNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYEYSLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTEVLYWINVVFVILFTGE
CVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPRKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEDRFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSPEKTDGTPSTISPPSYDSVTKPDKEKYEKDKTEKEDKGK
DGKEGKK
NT seq 5964 nt   +upstreamnt  +downstreamnt
atggcaatgttgcctcccccaggacctcagagctttgtctacttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaaacaaaggaacccaaagaagaaaagaaa
gacgatgacgacgaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacatccctcagggcatggtttcggagcccctggaggacctggaccct
tactatgcagacaaaaaaactttcatagttttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatgctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacactccgcattcagcatgcttatcatgtgcactattctgacgaattgc
atatttatgaccatgagtaaccctccagattggaccaagaatgtagagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtaggagaa
ttcactttccttcgtgacccttggaactggcttgattttgttgtcattgtttttgcgtat
ttaacagaatttgtaaatctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaattccaggcctgaagaccatcgtaggggccctgatccag
tctgtgaagaagctttctgacgtcatgatcctgactgtgttctgtctgagcgtgtttgca
ctgattggactgcagctctttatgggcaacctgaagcaaaaatgtatgcggactccactt
gaaaataatgaaacaatagaaagcatattgaatactcttgacgaagaagactatggaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcaccgattca
ggtcagtgtccagaagggtacacctgtgtgaaggttggcaggaaccctgattatggctat
acgagcttcgatactttcagttgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggctgtggtt
gccatggcctatgaagaacagaaccaggcaaacatcgaagaagctaggcagaaagagtta
gaatttcaacagatgttagatcgacttaaaaaagagcaagaggaagctgaggcaatagca
ttggcagcagctgaatatacaagcattgagagaagccggataatgggcctctccgagagt
tcttccgaaacatccaaactgagctctaaaagtgctaaagaaagaagaaacagaagaagg
aaaaagaatcaaaagaaactctccattggggaagaaaagggagatgatgagaaattgtcc
aaatcggaatccgaggagagcatcaggagaaaaagcttccaccttggtgttgaaggtcat
aggcgagcacttgaaaagagattgtctacccctaaccagtcaccactcagcattcatggc
tcctcgttttctgcaaggcgaagcagcagaacaagtctttttagtttcaaaggtcgagga
aaagatattggatctgagactgaatttgctgacgatgagcatagcatcttcggagacaat
gagagcaggaggggctcgctgttcgtgccccacagacctcgggagcggcgcagcagtaat
atcagccaagccagtaggtcccccccagtgctgccggtgaacaggaagatgcactgcgcc
gtggactgcaatggtgtggtctccttggtggatggaccctcagccctcatgctccccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagtggtacaaac
aatcaaatacacaagaaaagacgttccagttcttacctcctttctgaggatatgttgaat
gatcccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaactcgaggagtccagacaaaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaacaacttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaacacactgttcatg
gctatggaacatcacccaatgactgatgaattcaaatatgtgctcactgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtacttccaagtaggatggaatatttttgacagtcttattgtgactttaagcttagtg
gagctttttctagcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttggcaaaatcttggccaacactgaacatgctgatcaagatcattggtaac
tcagtgggggctctaggtaacctcaccttggtgttggccatcatcgtcttcatttttgcc
gtggtcggcatgcagctctttggtaagagctacaaagaatgtgtctgtaagatcaatgaa
gactgcacactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ttatttcttgctttattattgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagactgcagtggctagaattaagaagggaataaattat
atgaaacaaaccttacgtgaatttattctaaaagcattttccacaaagccaaagatttcc
aaagagataagacgaacagaagatctaaattttaagaaggaaaactacatctctaaccac
acacttgctgaaatgagcaaggatcacaattttcacaaagaaaaagataaaaccagtggt
tttggaaacagcatggacaaatacttggtggaagaaagtgaatgtcaatcatttattcat
aatcccagcctcacagtgacagtgccaattgcacctggggaatctgatttggaaattatg
aatactgaggaacttagcagtgattcagatagtgaatacagcaaagggaggctgaatgga
tcgagttcctctgagtgcagcacagttgataaccctgtgccaggagaaggagaggaagca
gaggctgagcctgtaaattcagatgagccagaggcctgttttacagatggttgtgtgcag
aggctcccatgctgccaagttaacacagaatcagggaaaggaagaatctggtggaacatc
aggaagacctgctataggatagttgagcacagttggtttgaaagcttcattgttctcatg
atcctgctcagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtatgctgacaagatattcacttacatctttattctggaaatg
cttctaaaatggatagcatatggttataaaacctatttcaccaatgcctggtgttggctg
gatttcttaattgtcgatgtttctttggttactttggttgcaaacactcttggctactca
gaccttggccccattaaatcccttcggacacttagagctttaagacctctgagagcttta
tctagatttgaaggaatgagggtggtcgtgaatgcactcataggtgcaatcccttccatc
atgaatgtgctacttgtgtgtcttatattctggctaatatttagcatcatgggagtaaat
ttgtttgctggcaagttctatcagtgtgttaacaccacagatgggtcaccgtttcctaca
agtgaagttgaaaatcgttctgagtgttttgctcttatgaatgttagtcaaaatgtgcga
tggaagaacctgaaagtgaactttgataatgttggacttggttacctgtctctgcttcaa
gttgcaacatttaaaggatggatggatattatgtatgcagcagttgattctgttaacgta
gacaagcagcccatatatgaatacagcctctatatgtatatttattttgtcatcttcatc
atctttgggtcattcttcaccttgaacttgttcattggggtcatcatagataacttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcaatgaaaaagctggggtccaagaaaccacaaaagccaatacctcgtccgggg
aacaaattccaaggatgtatatttgacctagtaacaaaccaagcttttgatatcgccatc
atggttcttatctgcctcaacatggtaaccatgatggtagaaaaagagggacaaagtgca
tacatgactgaagttttatattggatcaatgtggtttttgttatccttttcactggagaa
tgtgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaacattttt
gattttgtggttgtgattctctccattgtaggtatgtttctagcagatttgatagaaagg
tattttgtgtcccctaccctgtttcgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctt
cctgcgttgtttaacatcggccttctgctctttctggtcatgttcatctacgccatcttc
ggaatgtccaactttgcctatgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctagcacctattctcaacagtgcaccacctgattgtgaccccagaaaagttcat
cctggaagctcagttgaaggagactgtgggaacccatctgtggggatattctattttgtc
agttacatcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctggag
aacttcagtgttgccactgaagaaagtacggagccgctgagtgaggatgactttgagatg
ttctatgaggtttgggagaagtttgaccctgatgccacccaatttatagagtatagcaaa
ctctctgattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtc
cagctcattgccatggatctgcccatggtcagtggggaccggatccattgtctcgacatc
ttatttgcttttacaaagcgtgttttgggtgaaagtggagagatggactctcttcgttca
cagatggaagacaggttcatgtctgcaaatccttctaaagtgtcctatgaacccatcaca
actacactaaaacgaaaacaggaagatgtgtctgctactgtcattcagcgtgcttacaga
cgttatcgcttacggcaaaatgtcaaaaacatatcaagtatatacataaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataacgttaatgagaactca
agtccagaaaaaacagatggaactccatccaccatctctccaccttcatatgatagtgta
acaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaagacaaaggaaaa
gatggcaaggaaggcaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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