KEGG   Physeter catodon (sperm whale): 102977906
Entry
102977906         CDS       T06011                                 
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    102977906 (DICER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102977906 (DICER1)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    102977906 (DICER1)
   microRNA pathway
    RISC loading complex
     102977906 (DICER1)
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_PBD Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C ResIII DEAD
Other DBs
NCBI-GeneID: 102977906
NCBI-ProteinID: XP_023986905
Ensembl: ENSPCTG00005020342
UniProt: A0A2Y9T7K5
Position
11:complement(173090664..173154273)
AA seq 1922 aa
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISVANSSSAENENYCKHSTIVVPENAAHQGANR
TSCLENHDQMSVNCRTLFESPGKLQIEVSTDLTAINGLSYNKNLANGSYDLANRDFCQGN
HLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPAMAA
LPGTTETGKALTDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEITKDCMLANGKLDDDFEEEEEEEEDLMWRAPKEDAEDEE
DFLEYDQEHIKFIDNMLMGSGAFVKKISLSAFSTTDSAYEWKMPKKSSLGSIPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPLIKRTDREKAVCPTRENFTSQQKNLSGS
RAAASGAGSRSSVLKDLEYGCLEIPPRCMFDHPDADRTLSHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq 5769 nt   +upstreamnt  +downstreamnt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaag
gttggggaatactcaaacctggaagtaagtgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactatcagacatcaaccttttggtgttcgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttcccagccatgtgagattgtggtagactgtggaccattt
actgacagaagtggcctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaggaaagagattctactttaatttctaaa
cagatactctcagactgtcgtgcggtattggtagttctgggaccctggtgtgcagataaa
gtagctggaatgatggtaagagaactacagaaatatatcaaacacgaacaagaggagctg
cacaggaaatttctattgtttacagacactttcctaaggaaaatccatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactg
cttgaaatcttacgcaaatataaaccttatgagcgacagcagtttgaaagcgttgagtgg
tataataataggaatcaggataattacgtgtcttggagtgattctgaggatgatgaggag
gatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaat
attttgtgtggaattatttttgtggaaagaagatatacggcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcagaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagt
attgtggaggagggtgttgacataccgaaatgcaacttggtggttcgttttgatctgccc
acagagtatcgatcctatgttcaatctaagggaagagcgagggcaccgatctctaattat
gtaatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgagaaacaaatgttccaagtcagttgataccggtgagactgac
attgagcctgttgtggatgacgatgatgttttcccaccatatgtgttgaggcccgatgat
ggtggtccacgagtcacagtcaacacggccatcggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcacctggctcctaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccattgtt
ggtcccccaatgagctgtatacgattggctgaaagagtcgtagctctcatttgctgtgaa
aaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagactgtt
aaatacgaagaagagcttgatttacatgatgaagaagagaccagtgttccaggaagacca
ggctccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttgagggatagc
taccccaagcccgatcagccttgttacctgtatgtgataggaatggttctaacgacacct
ttacctgatgagctcaactttagaaggcggaagctttatccccctgaggataccacaaga
tgctttggaatactgacagccaaacccatacctcagattccgcactttcctgtgtacaca
cgctctggagaggttaccatatctattgagttgaagaagtctggtttcacgttatctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacccacagacgctgactcagcatactgtgttctacct
cttaatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatt
gagaagtctgaagctcgcataggcattcccagtacaaagtattcaaaagaaactcccttt
gtttttaaactagaagattaccaagatgcagttatcattccaagatatcgcaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttacccccctgagtaaattt
ccttcccctgaatatgaaacttttgcagaatattataaaacaaagtataaccttgacctg
accaatctcaaccagccgctgctggatgtggaccacacatcttcaagactgaatcttttg
acacctcgccatttgaatcagaaggggaaagctcttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgctata
catccaattccagcatcactgtggagaaaagcggtttgtctccccagcatactttatcgc
cttcactgccttttgaccgcagaggagctaagagcgcagacagccggcgacgctggtgtg
ggagtgaggtcactgcccgcggattttagataccccaacttagactttgggtggaaaaaa
tctattgacagcaaatctttcatctcagttgctaactcctcttcagctgaaaatgagaat
tactgtaagcacagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaataga
acctcctgtctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcgagtca
cctggtaagctccaaattgaagtttcaacagatcttacagcaattaatggtctttcttac
aataaaaatcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgaattactacaaacaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattatgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacaaatctacctcagatggaagtcccgcgatggccgcc
ctgcctggtactacagagactggtaaggcgctcacggacaggacggcttctgagcagagc
ccttctcccgggtactcctcgagaacgcttggcccaaaccctggacttattcttcaggct
ttgaccctttcaaatgctagtgatggatttaacctggagcggctcgaaatgcttggcgac
tcctttctaaagcatgccatcaccacgtatctcttttgcacctatcccgatgctcacgag
ggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtcgatatttgatccccctgtgaattgg
cttcctcctggttatgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaataacaaaagactgcatgttggctaatggcaagctggacgatgacttcgaggaggag
gaagaggaggaggaggacctgatgtggagggctccgaaggaggacgccgaggacgaagag
gacttcctggagtacgatcaggagcatatcaagttcatagataacatgttgatgggatcc
ggagcttttgtaaagaaaatctcgctttctgctttttcaaccactgattctgcctatgaa
tggaaaatgcccaaaaaatcctccttaggtagtataccattttcatcagattttgaggat
tttgactatagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagag
gatgactttgtggtggggttctggaacccatcagaagaaaactgtggtgttgacacaggg
aaacagtccatttcttacgacctgcacaccgagcagtgcattgctgacaaaagcatagcc
gactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcag
cttttcctctgttcgctgggcctgaaggtgctcccgctaattaagaggactgatcgggaa
aaggccgtgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagc
cgcgctgccgcctctggagctggctcccgctcctctgtgttgaaagacttggagtatggg
tgtttggagatcccaccgagatgtatgtttgatcacccagatgcagataggacactgagt
cacctcatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaagaataag
gcttacctactacaggcttttacacacgcctcctaccactacaacactatcactgattgt
taccagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctt
tatgaagacccgcggcagcactccccaggggtcctgactgacctgcgctcggctctggtc
aacaacaccatctttgcatcgctggctgtgaagtatgactaccacaagtacttcaaagca
gtttctcccgagctcttccacgtcatcgatgattttgtgcagtttcagctcgagaagaat
gaaatgcaagggatggattctgagcttaggagatctgaggaggatgaagagaaggaagag
gatattgaagttccaaaggccatgggggatattttcgagtcgcttgctggtgccatttac
atggatagcgggatgtcgctggagatggtttggcaggtgtactatcctatgatgcggccg
ctgatagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatg
gaaccagaaaccgccaaatttagcccggctgagagaacttatgatggcaaggtcagagtc
accgtggaagtagtaggaaaggggaaattcaaaggtgttggccgaagttacaggatcgcc
aagtctgcggcagcaagaagagccctacgaagcctcaaagctaatcaacctcaggttccc
aacagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (27)   

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