KEGG   Pomacea canaliculata (golden apple snail): 112570799
Entry
112570799         CDS       T05881                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
  KO
K20096  ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
Organism
pcan  Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcan03009]
    112570799
Enzymes [BR:pcan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     112570799
Ribosome biogenesis [BR:pcan03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   112570799
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_22 LpxB SecA_DEAD
Other DBs
NCBI-GeneID: 112570799
NCBI-ProteinID: XP_025105207
Position
LG8:complement(5144734..5151725)
AA seq 556 aa
MFRAFASQRICQWCCSFHQHLIRMHFTNGVATELPRITIPVKMQKQLIKLRERKQHKQHQ
SKKPSFKSPLVISCKRSNYNHHRGQTYSDFGPSTLASYGWKNRKAAGDYMTIMCHDKNPA
LLSEESEITFTDLKLDDDIKKAVLALGYQKPTAIQQAALSSILSGTHTLCAAETGSGKTL
AYLLPALDMLLRRKRCDIMTQTENSPSVIILAPSRELADQITGVARSLQEHLDFVPYSVC
GGRGTKGRLAWPVRKPMDILISTPGVLRKFLIAGHIKRSALQQIILDEADTLLDDSFIGT
LDSILQRLRVQAQTGIDPVTTDNKEKSSPFVSGVQFVLVSATMPRDLQNSIGTYLPVDSI
KKVTTAGLNRLMPHVPQKFLRVLPSRKPEIILKLAKQQIERSMPSMIFCNDSPTSFFLKH
LLEENGITSAIINGKMQEKYRRGVFDKFKDGHFNIMVATDVASRGXDTLHVQHVINYDFP
LFVSDYIHRAGRVGRVGAKHNGQVTSLVSHSWEVDVLWQIEIAARKVSEIHNVNANIKRK
VEADFSRRHGKPSDII
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtttcgagcgttcgccagtcagcgaatctgtcagtggtgctgtagttttcatcagcat
ctaatccgaatgcacttcacgaatggtgtggctactgaacttccaagaatcaccattcca
gttaaaatgcagaaacagctgataaaactgcgtgaacggaagcagcacaaacagcaccag
tcaaagaaaccatcattcaagtcacctcttgttatatcttgcaagcgcagtaattacaac
caccacagaggacagacttacagtgattttgggccatcaacattggcatcatatggctgg
aaaaatcgcaaagcagctggggattatatgacaatcatgtgtcatgacaagaatccagca
ctgctgtcagaagagtcagaaataacatttactgatttaaaacttgatgatgacataaag
aaggcagtacttgcacttggctaccaaaaacctaccgctatacagcaagctgctttgtca
tctattctgagtggaacacacacactgtgtgctgctgaaactggctcaggaaagactctg
gcatacttgctgccagcccttgacatgctgctgagacgaaagagatgcgacataatgaca
cagacagagaactctccttcagtcataattttagccccatccagagaactagcagatcag
attacaggagtagcaaggagtctacaagagcatcttgattttgttccttactcagtttgt
ggaggaagagggacaaagggtcgattggcatggccagtgaggaagcctatggacattctt
atttctacacctggtgtattacgaaaatttcttattgcaggacacattaaacggtcagcc
ctgcagcagattattctggatgaagcagacactctgcttgatgacagcttcattggcact
ttggacagtattctgcaaagactgagggtccaggcacagacaggaatcgaccctgttaca
actgacaacaaagagaaatcttctccattcgtgtctggtgttcagtttgtgttggtcagt
gccacaatgccacgagatttgcaaaacagcattggcacctacctaccagtggactctatt
aagaaagtgaccactgctggtttaaatcgactgatgcctcacgttccccagaaattttta
agagtgctgccatcacggaaaccagaaataattctaaagctagcaaagcagcaaattgaa
agaagtatgccatccatgatattctgtaatgacagccccacaagtttcttcttaaagcat
cttttggaggaaaatggtatcacttctgcaattataaatgggaagatgcaggaaaagtac
cgccgtggtgtgtttgacaagttcaaagatgggcatttcaacatcatggtagccacagat
gtggcatctcgcggcntagacacccttcatgtacaacatgtcataaactacgattttccc
ttgtttgtgtctgattacattcatcgagcaggccgtgttggtcgtgtaggggccaagcac
aatggtcaagtgaccagccttgtatcacacagttgggaggtggatgttttatggcagata
gagattgctgccagaaaagtatccgaaatacacaatgtcaatgccaacatcaaacgaaag
gtggaggccgatttttccaggagacatggcaaaccctccgacattatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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