KEGG   Pseudoalteromonas carrageenovora: PC2016_3645
Entry
PC2016_3645       CDS       T06565                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
pcar  Pseudoalteromonas carrageenovora
Pathway
pcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PC2016_3645
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcar02044]
    PC2016_3645
Secretion system [BR:pcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC2016_3645
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 nSTAND3 Sigma54_activat AAA_25 SLFN-g3_helicase Zeta_toxin AAA_7 IstB_IS21 AAA_14 TniB TIP49 AAA_30 NACHT ResIII ATPase_2 Clp_N AAA_18 CbiA SRP54 Rad17 AAA_24 DUF815 AAA_6 GAS Hpr_kinase_C YfdX Nuf2_DHR10-like Sec10_N
Other DBs
NCBI-ProteinID: QBJ73816
Position
II:complement(536704..539307)
AA seq 867 aa
MSSMTLNKLVEKLSPDCRKSLEGAVAICNSRSHFTVELEHWLLAMIEQQLDDVRLIFGSF
DIDIDKVQQDLNQSLESFKTGSESSPSLSVHVTSLLKQSWLSTSIEFTDNQIRSAYVIYT
LTKDDTLSSLVTRCSKLFNKIEPGQLLHAWPEIVAQSQERNHSVQNASTQANAGSKTPSL
DQFTVDLTAQALAGKIDPILGRDFEIRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLAL
RIAQKDVPAVLQNVKIHSLDLALLQAGAGMKGEFENRLKSLINEVKNAVNPVVLFIDEAH
TMIGSGGAAGQNDAANLLKPALARGELRTIAATTWAEYKKFFEKDAALTRRFQVVKVEEP
TPEKAVAMLRGLVPVMEKHHKVFISEQALEGAVHLSHRYITARQLPDKAVALLDTACARV
AMSQASTPNTIEQLVNRLSEIETQVKMLNREQKTGLDHSQQLDTLKAELITIEEQLAPLN
EQFSTEKEIVTELNQALELINSQDDESSQEILDKLRLSKEKLASFEHNMVHWQVNEELIA
QVISDWTGIPVGKMHEDEIHGILNLAQQMKQRVVGQDHALDLIAKVVQTSRAQLADESRP
NGIFMLAGPSGVGKTETALSLAQEVYGSEENVTVINMSEFKEEHKVSLLLGSPPGYVGYG
EGGILTEAVRRKPYSVVLLDEMEKAHPGVQDIFYQVFDKGTIKDGEGRDIDFKNTIIIMT
SNVGTDTTMSLFEDEESKPSIKGLLKALQDDLLASFKPAFLGRINVIPYIPLSDDILTEI
AAIQINKIIKRVKKHYNAELIYNKDVIEYIIANCQNAGSGARNIHTILQNRVLPLLSEVL
LSSMIDDKEINSISLLIKDNEFELELN
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgtcttcgatgacactgaataaactagttgaaaaactgagtcccgattgcagaaaaagc
ctagaaggtgctgttgctatatgtaatagccgcagtcattttacggttgaacttgaacat
tggctactagctatgattgagcagcaattagatgacgttagactaatttttggctcgttc
gatatagatattgataaagttcagcaggatttaaatcaatcactagagtcgtttaaaacg
ggtagtgagtcatcacctagtttgtcagtgcatgtaacgagtctgcttaagcagtcttgg
ttaagtaccagcattgagtttacagataatcaaattcgtagtgcatacgttatttatacc
cttactaaagacgatactttatcaagtttagttacacgttgtagtaagttatttaataaa
atagaacctggtcaattgcttcatgcatggcctgaaatagttgcgcaatctcaagagcgt
aaccattcagtacaaaatgcatcaactcaggcaaatgctggctctaaaaccccaagctta
gatcaattcactgttgatttaacagcccaggcactcgctggaaaaatagaccctattctt
ggtcgtgatttcgaaatacgtcaaatggtagatattttgacaaggcgtcgtcaaaacaac
ccaattttaacgggtgaagccggtgtaggcaaaacagcagtcgttgaagggcttgcgtta
agaatcgctcaaaaagacgtaccggctgtattacaaaatgtaaaaattcacagcttagat
ttagctctactacaagctggtgcgggtatgaaaggtgaatttgaaaatcgccttaaatca
cttatcaatgaagtaaagaatgcggtaaatccggtagttttatttattgatgaagcacat
accatgattggtagcggtggtgctgctggtcaaaatgacgcggccaacctattaaagccc
gctttagcgcgtggtgaattacgtacaatagcggcaactacttgggctgaatacaaaaag
ttttttgaaaaagacgctgcattaacacgccgattccaagttgtaaaagttgaagagcca
acccctgaaaaagcggtagcaatgttacgcggcttagtgccggtaatggaaaagcatcac
aaggtatttatatctgaacaagcacttgaaggcgcggtgcatttatcacatcgttatatt
actgcaaggcagctaccagacaaagccgtagcattactagatacagcgtgtgcacgtgta
gcaatgagccaagcatcaactccaaatactattgagcagcttgtaaatcgcttaagcgaa
atagaaacacaagtaaaaatgcttaacagagagcaaaaaacgggtttagatcattcacag
cagctagacacattaaaagcagagctaattacaattgaagagcaattagcccctttaaat
gaacaatttagtactgaaaaagaaattgtaactgagcttaatcaagctctagagcttatt
aactctcaagacgatgagtcatcacaagagatactcgataagctaagacttagcaaagag
aagctagcctcttttgaacataatatggttcattggcaggttaacgaagagcttatagcg
caagttatttcagattggacaggcatacctgttggtaaaatgcacgaagatgaaattcat
ggcattttaaatttagcacaacaaatgaagcaacgagttgtaggacaagaccatgctctt
gatttaatagctaaagttgttcaaacatcgcgtgctcaactcgctgatgaaagccgccct
aacggtatatttatgttagcagggccaagcggtgtaggtaaaacagaaacagcgctttct
ttagcccaagaagtatatggtagtgaagaaaacgtcactgtaattaatatgtctgagttt
aaagaagagcataaagtatctttactgcttggctcacctccagggtatgtaggttacggc
gagggaggcatactaaccgaagccgtaagaagaaagccatacagtgttgtacttttagat
gagatggaaaaagcacatcctggcgtgcaagatattttttatcaagtgtttgataaaggt
acaataaaagacggtgaaggccgcgatatcgactttaaaaacactattataattatgacc
tcaaacgtgggcacagacaccacaatgagcttatttgaagacgaagaaagtaaaccaagt
atcaaaggtttattaaaggcactacaagatgatttacttgcttcatttaaacccgcattt
ttaggtcgtattaatgtaataccttacatcccactaagtgacgatattcttacagaaatt
gccgctattcaaataaataaaataattaaacgtgttaaaaaacattacaatgccgagtta
atttataataaagatgtaattgaatatattattgctaattgccagaacgcaggctcaggt
gcacgtaatattcacactatactgcaaaacagagtgctgccattattgtctgaagtttta
ctttctagcatgattgatgacaaagaaattaatagtatatcgctattaataaaagataat
gaatttgaactggagctgaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (34)   
   Pfam (34)   
All databases (40)   

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