KEGG   Paraburkholderia caledonica: CUJ87_07520
Entry
CUJ87_07520       CDS       T05740                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
pcj  Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:pcj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcj03009]
    CUJ87_07520
Enzymes [BR:pcj01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     CUJ87_07520
Ribosome biogenesis [BR:pcj03009]
 Prokaryotic type
  ribosomal protein modification factors
   CUJ87_07520
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM CLP1_P Methyltransf_2
Other DBs
NCBI-ProteinID: AXF14275
UniProt: A0A2Z5MA62
Position
PHRS4_A:1697203..1698594
AA seq 463 aa
MPQTISSTLPTPSSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGE
VMQHVHTHLPKPHDPFVDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVADVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMAAGPYKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEG
ATANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINADGGIGRTAA
DAPEIDGVVYIAPAVKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgccgcagaccatttcctccaccttgccgacgccttccagtccgaaggtcggcttcgtc
agcctcggctgcccgaaagctctcgtcgactccgagcagatcatcacgcagctgcgcgcc
gaaggctatgagatttccggcacgtatgacggcgcggacctcgtggtcgtcaatacctgc
ggcttcatcgacgaagctgtgcaggaaagcctcgacgcgatcggcgaggcactcaatgaa
aacggcaaggtgatcgtcaccggctgccttggcgcgaagaagagcgcgagcggctcgggg
ctcatcgaagaagtgcatccgaaggtgctggccgtcaccggtccgcacgcgttgggcgaa
gtgatgcagcatgtgcacacgcatctgccgaagccgcacgatccgttcgtcgatctcgtg
ccggccgctggcgtgaagctcacgccgcgtcactacgcgtacctgaaaatttccgaaggc
tgcaatcaccgctgcacgttctgcatcatcccctccatgcgcggcgatctcgtatcgcga
ccggtcgcggacgtgatgctcgaagcggaaaatctgttcaagtccggcgtgaaggaactg
ctcgttatctcgcaggacacgagcgcgtatggcgtcgacgtcaaatatcgcacgggcttc
tggaacggcaagccgatcaagacgcgtatgaccgatctggttggcgcgctcggcgaactg
gccgcccaatacggtgcgtgggtgcgcctgcactacgtatatccgtatccgagcgtggac
gaagtcatcccgatgatggcggcaggtccgtacaaggggcacgtgttgccatatctcgac
gtgccgttccagcacgcgcatcctgaagtgttgaagcgcatgaagcgcccggccaacgcc
gagaaagtaatggagcgcgtgaaggcgtggcgcgaaatgtgcccggatctgacgatccgc
agcacgtttatcgcgggctttccgggcgagaccgaagaacagtttcagacgctgctcgac
tttatccgcgaggccgaactggatcgtgtcggctgcttcgcctactcgccggttgaaggc
gctacggcgaacgaactcgacggcgcgttgcccgatgaagtgcgcgaggagcgccgtgcg
cggttcatggaagtggccgaagaggtgtcggcgaaacgcatcgcgaagaaggtcggcaag
acgctgaaagtgctggtcgacgagatcaatgccgacggcggtattggccgcaccgccgcg
gatgcgccggagatcgacggcgtcgtatatatcgcgcccgccgtgaaggcgtcgaagcgt
tacaaggtcggcgatttcgtgtcggtgaagatcaccggcgcggacggccacgatctgtgg
ggcgaggtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system