KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_24260
Entry
JM49_24260        CDS       T03338                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    JM49_24260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcp03400]
    JM49_24260
DNA repair and recombination proteins [BR:pcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     JM49_24260
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-ProteinID: AIS14660
Position
5298133..5300712
AA seq 859 aa
MNKALTDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERINPVELL
IPDDWPQGLPAEKRRGVRRRAPWDFERDSAHKSLCQQFSTQDLKGFGCENLTLAIGAAGC
LLSYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLKVLQARQTSIGCLLDGYLFERLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALAALPELQVAMTELEAEHLSQLAVTTSTYPELAALLEKAIIDNPPA
VIRDGGVLKTGYDAELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL
PSKQAEQAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLETLIG
HLPPLQDTAAALAELDVLSNLAERALNLDLNCPRFVSEPCMRITQGRHPVVEQVLTTPFV
ANDLSLDDQTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAQ
LRAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPSDVIVRAREHLSRLETTSLPHEAPSPVPGKPSVPQQSDMFASLPHPVLDDLAKLDL
DDMTPRKALEMLYTLKTRI
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgaataaagcgctcaccgatctgtcctcccacacgccgatgatgcagcagtactggcgc
ctcaagaaccagcaccccgaccagctgatgttctatcgcatgggcgacttctacgaaatc
ttctatgaagacgcaaagaaggccgccaagctgctggacatcaccctgaccgcgcgcggg
cagtcggctggccaggcgattccgatgtgcgggattccttatcacgccgccgaaggttac
ctggccaagctggtgaagcttggcgagtcggtggtgatctgtgaacaggtcggcgacccg
gccaccagcaagggcccggtggagcgccaggtggtgcggatcatcaccccggggaccgtc
agcgacgaggccctgctcgacgagcgccgggacaacctgatcgcagcggtgctgggcgac
gagcgcctgttcggcctcgcggtgctagatatcaccagcggcaatttcacggtcctggaa
atcaagggctgggaaaacctgctggccgagctggaacgcatcaacccggtggaactgttg
attccggacgactggccgcagggcctgccggcggaaaaacgccgtggcgtgcgccgtcgc
gcgccctgggacttcgaacgcgactccgcccacaagagcctgtgccagcagttctccacc
caggacctcaagggcttcggctgcgagaacctgaccctggccatcggcgccgcgggctgc
ctgctgagctatgccaaggaaacccagcgcactgccctgccccacctgcgcagcctgcgt
cacgaacgcctggacgacaccgtggtactcgacggcgccagccggcgcaacctggagctg
gacaccaacctcgccggcggtcgcgataacaccctgcaatcggtggtcgaccgttgccag
accgcgatgggcagccgcttgctgacccgctggctgaaccgcccgctgcgcgacttgaaa
gtcctgcaggcgcggcagacctcgatcggctgcctgctggacggttacctcttcgaaagg
ctgcaaccgcagctcaaggaaatcggcgacatcgagcggatcctcgcccgtatcggcctg
cgcaatgcccgtccccgcgacctggcgcgcctgcgcgatgccctggcggcgctgccggaa
ctgcaagtggcaatgaccgagctcgaagccgagcacctgagccaactggccgtgaccacc
agcacctacccggaactggcggcgctgctggaaaaagccatcatcgacaacccgccagcg
gtgatccgcgatggcggcgtgctgaagaccggctacgacgccgagctggacgagctgcaa
tcgctgagcgaaaacgccggccagttcctcatcgacctggaagcccgggaaaaggcccgc
accggtctggccaaccttaaagtcggttacaaccggattcacggctacttcatcgaactg
ccgagcaaacaggcggaacaggccccggcggactacatccggcgccagaccctcaaaggc
gcagaacgcttcatcacccctgagctcaaggctttcgaagataaggcgctgtccgccaag
agccgcgcgctggctcgcgagaagatgctctacgaagccctgctggaaaccctgatcggt
cacctgccgccgctgcaggacaccgccgcggcgctggccgagctggacgtgctgagcaac
ctggccgagcgagcgctgaacctcgacctcaattgcccgcgcttcgtcagcgagccgtgc
atgcgcatcacccagggtcgtcacccggtggtcgagcaggtcctgaccacgccgttcgtg
gccaacgacctgagcctcgacgatcaaacccggatgttggtaatcaccggcccgaacatg
ggtggtaaatccacttatatgcggcaaaccgcgctgatcgtgctgctggcccatatcggc
agcttcgtgccggcggcgagctgcgagctgtcgctggtggaccgcatctttacccggatc
ggctccagcgatgacctggccggcggtcgttccaccttcatggtggaaatgagcgaaacc
gccaacatcctgcataacgccaccgagcgcagcctggtgctgatggacgaagtgggtcgc
ggcaccagtaccttcgatggtctgtccctggcctgggctgcggcagaacgtctcgcccaa
ctgcgggcgtacaccctgttcgccacccactacttcgagctcaccgtcctgccggaaagc
gaacctctggtcgccaacgtgcacctcaacgccaccgagcacaacgaacgcatcgtgttc
ctgcaccacgtgctgccaggccctgccagccagagctatggcctggccgtggcccagttg
gcgggggttccgagcgatgtgatcgtccgcgcccgcgagcacctgagtcgcctggagacc
accagcctgccccatgaagcgccgtctccggtaccgggcaagccttcggtcccgcagcaa
agcgacatgttcgccagcctgccgcacccggtcctcgatgacctggccaagctcgatctg
gacgacatgaccccgcgcaaggcactggaaatgctctatacattgaagacacgcatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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