KEGG   Phascolarctos cinereus (koala): 110203640
Entry
110203640         CDS       T05867                                 
Symbol
ERCC2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit isoform X1
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03022  Basal transcription factors
pcw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110203640 (ERCC2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110203640 (ERCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcw03021]
    110203640 (ERCC2)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110203640 (ERCC2)
Enzymes [BR:pcw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     110203640 (ERCC2)
Transcription machinery [BR:pcw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110203640 (ERCC2)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110203640 (ERCC2)
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 ResIII DEAD SesA
Other DBs
NCBI-GeneID: 110203640
NCBI-ProteinID: XP_020835793
UniProt: A0A6P5JR16
Position
Unknown
AA seq 760 aa
MKLNVDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQ
RVHPLEVTKLIYCSRTVPEIEKVIEELRKLMDSYEKQEGEKVPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQHQQDASTPHCRFYEEFDAQGRQVPIPWGIYNLDDL
KAFGLQKGWCPYFLARYSILHANVIVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQNNLETLQRTVHKIKETDEKRLREEYRRLVEGLREASLARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRTQHVVQESPPAFLGG
LAHRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLSNFATLVSTYSRGFTIIIEP
FDERTPTISNPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVAAWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEDTLRRIEQIAQQL
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgaagctgaatgtcgatgggctcctggtccacttcccctatgactacatctaccccgaa
caattctcttacatgttggagctcaagcggaccctggatgccaagggtcacggggtcctc
gagatgccctcgggcactggcaagaccatctccctcctggccttgattgttgcataccag
cgggttcaccccctggaagtaaccaagctcatctactgctcaaggactgtccctgagatt
gagaaggtgattgaggagctcaggaagctgatggactcctatgagaagcaggagggagag
aaggtgccattcctgggcctggccttgagctctcggaagaatctgtgcattcacccggag
gtgacccccttgcggtttggaaaggacgtggatgggaagtgtcacagcctgacggcctct
tatgtgcgggcccagcaccagcaggacgccagcacccctcactgccgcttctatgaggag
tttgatgcccaaggccgccaagtgcccatcccctggggcatctacaacctggacgacctg
aaggcctttggactacagaaaggctggtgcccgtacttccttgcccggtactcgatcctt
catgccaacgtgatcgtctacagctaccactaccttctggacccgaagatcgctgacctc
gtttccaaagagctggctcggaaggctgttgtggtctttgatgaggcccacaacattgac
aacgtgtgcatcgactctatgagtgtgaacctgacccgccggaccctggaccgctgtcag
aacaacttggagacgttgcagcgcacggttcacaagatcaaggagacagatgaaaaacgt
ctgcgggaggaataccgccgcctggtggaggggcttcgagaggccagcttagcccgtgag
actgacgcccacctggccaacccggtccttcccgacgaggtgttgcaggaggcagtgcct
ggctccatccggacggcggagcacttcctgggcttcctgcggcgcctgctggaatatgtc
aagtggcgcctccggacgcagcacgtggtccaggagagcccgccagccttcctggggggc
ctggcccaccgtgtctgtatccagcgcaagcccttgcggttctgtgcagagcgactgagg
tctctgctccacacgctcgagatcgcggatctggccgacttctcccccctcaccctcctc
tccaactttgccacgctggtcagcacctactcccgaggcttcaccattatcattgagccc
tttgatgagaggaccccaaccatctccaacccggtgctgcatttcagctgcatggatgcc
tccctggccatcaagccggtgtttgagcgctttcagtctgtgatcatcacctcagggacc
ctgtcccctttggatatctaccccaaaatattggacttccaccctgtgaccatggcaacc
ttcaccatgaccctagcccgggtctgcctctgccccatgatcgttggccgaggcaatgat
caagtggccatcagctccaagtttgagacccgagaggatatcgctgtaatccggaattac
gggaacttgctcctggagatgtccgctgtggtccctgacggcattgttgcctttttcacc
agctatcagtacatggagagtaccgtggctgcctggtatgagcagggcatcctggagaac
attcagcggaacaagcttcttttcattgagacccaggatggagcagagacgagtgtggcc
ttggagaagtaccaggaggcgtgtgagaatggccgaggggccatcctgctgtccgtggcc
agaggcaaggtgtccgagggcatcgactttgtccaccactatggccgggccgtcatcatg
tttggtgtcccctatgtctacacccaaagccgaattctcaaggcccgcctggagttcctg
cgtgatcagttccagatccgagagaatgacttcctgacctttgatgccatgcgacacgca
gcccagtgtgtgggccgcgccatccggggcaagactgactatgggctcatgatctttgct
gacaagcgcttcgcccgggccgataagcgcgggaagctccctcgctggattcaggagcac
ctgacagacgccaacctcaacctgacggtggacgagggcgtgcaggtggccaagtacttc
ctgaggcagatggcccagcccttccacagggaggaccagctgggactgtctttgctgagc
ctggagcagcttcagtccgaggacactctccgccggatagagcagatcgcccagcagctg
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system