KEGG   Phascolarctos cinereus (koala): 110210405
Entry
110210405         CDS       T05867                                 
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
  KO
K23195  transcriptional repressor CTCF
Organism
pcw  Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcw03000]
    110210405 (CTCF)
   03036 Chromosome and associated proteins [BR:pcw03036]
    110210405 (CTCF)
Transcription factors [BR:pcw03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    110210405 (CTCF)
Chromosome and associated proteins [BR:pcw03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    110210405 (CTCF)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_jaz zf-met zf-C2HE zf-C2H2_6 A24_N_bact
Other DBs
NCBI-GeneID: 110210405
NCBI-ProteinID: XP_020844998
UniProt: A0A6P5KHA2
Position
Unknown
AA seq 728 aa
MEGEAVEAIMEESETFIKGKERKTYQRRREGGQDEDTCHISQTQADGNEVVQEVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVPQEADATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGLDGIDGENGGETKKGKRGRKR
KMRSKKEESSDSEENAEPDLDDNEDEEETAVEIEAEPEVQPVTPAPPPAKKRRGRPPGKA
SQPKQAQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVEGEEEEPQSAVVEAPNGDLTPE
MILSMMDR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggaaggtgaggcggttgaagcaatcatggaggagtctgaaaccttcatcaaaggaaaa
gagagaaaaacgtatcagagacgccgggaagggggccaggatgaggatacttgccatata
tcacagacccaggcggatgggaatgaagtggttcaggaggtaaacagcagtgtccagatg
gtcatgatggagcagctggatcctaccctacttcagatgaagactgaagtcatggagggt
accgtacctcaggaagctgatgccactgtggatgacacgcaaataataacacttcaagtt
gttaatatggaagaacaacctataaaccttggggaacttcagcttgttcaggtccctgta
ccagtaacggtgcctgtggccaccacttctgtagaagaactgcagggggcttatgaaaat
gaggtctctaaagaaggcctgcctgaaggcgagcccatgatttgtcacacgttacctttg
cctgaaggtttccaggtggtaaaagtaggtgccaatggtgaggttgaaacattagagcaa
ggggagctgcagccccaggaagatcccaattggcagaaagacccagactatcagccacct
gccaaaaagacaaaaaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagat
gtggatgtttctgtgtatgactttgaggaagagcaacaagagggtttattatcagaggtc
aacgcagagaaggttgttggtaacatgaagcctccaaagccaacaaaaataaaaaagaaa
ggtgtgaaaaagacattccagtgtgagctttgcagttatacgtgtccacgacgttcaaat
ttggatcgacacatgaaaagtcatacggatgaaagaccacataagtgccatctctgtggc
agagctttccgcacagtcaccttgctgaggaaccacctaaatactcacacaggtactcgt
cctcataagtgccccgactgcgacatggcctttgtaaccagtggagaattagtgcggcat
cgacgctataaacatacccatgagaaacccttcaagtgttccatgtgtgattatgctagt
gttgaggtcagcaagttgaaacgtcacattcgctctcacactggagagcgtccattccag
tgtagcttgtgcagttacgccagcagggacacatacaagctgaaaagacacatgagaacc
cattccggtgaaaagccgtatgaatgttatatttgtcatgctcgctttacccagagtggc
acaatgaaaatgcacatcttacagaagcacacagagaatgtggccaaatttcactgtcca
cattgtgacactgtcatagccagaaaaagtgatttgggtgtccatttgcgaaagcagcat
tcctacatcgagcagggcaagaaatgtcgttattgtgatgctgtgtttcatgagcggtat
gccctaattcagcatcaaaaatcccacaaaaatgagaagcgtttcaagtgtgaccagtgc
gactatgcatgcagacaggagcggcacatgataatgcacaaacgaacgcacactggagag
aagccctatgcctgtagtcactgcgacaagacctttcgccagaaacagcttctggacatg
catttcaaacgctatcatgaccccaactttgtccctgctgcttttgtctgttccaagtgc
ggtaaaacatttacacgccggaacacgatggcgaggcacgctgacaattgtactggtcta
gatggcatcgacggagaaaatggaggtgaaaccaagaagggcaagcgtgggaggaaaaga
aagatgcgctccaaaaaagaggagtcctccgatagtgaagaaaatgctgaaccagatctg
gatgacaatgaggatgaggaagaaactgctgttgaaattgaagccgaaccagaagttcag
cctgtgactccagccccaccgccggccaaaaagcgaagagggaggccaccgggcaaggcc
agccagcccaagcaagcccagcctacagcaatcattcaggttgaagaccagaacactggt
gcaattgaaaacattatagtggaagtcaaaaaagagcctgatgcagaaacagtagaaggt
gaagaagaagagccccagtcagctgtggtggaagctcccaatggagatctcactccagag
atgattctgagcatgatggaccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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