KEGG   Phoenix dactylifera (date palm): 103702762
Entry
103702762         CDS       T03274                                 
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pda03036]
    103702762
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103702762
   microRNA pathway
    RISC loading complex
     103702762
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm DND1_DSRM PAZ Helicase_C DEAD ResIII Dicer_dsRBD Dicer_PBD SNF2-rel_dom
Other DBs
NCBI-GeneID: 103702762
NCBI-ProteinID: XP_008783544
UniProt: A0A8B7BR17
Position
5:7541438..7558386
AA seq 1932 aa
MGGEPTLPGPAGAGNAPANGGGDPASYWFDACEDDSLAGIVFSDFDPSMLPSFDQMGGED
GFLGEIDRILESVNGDPSAPLPAETKAGQKEDSVAAAAPEGGGGLPAPVENGSKSSRSEE
RVGVGEEKKGVDGGAPKRDGGVLNGDWRYGKRARFGDRMMERGRYRDPVCRRRPRDWEDG
DRRRREGDWSRKRERDGSERRDSRDRDWRERDSRGYWERDKSGKVVFRVGPWEAELNREA
KKAKQDGLEEARRSPEKRQEENKEKPAEELARQYQLDVLEQAKXKNTIAFLETGAGKTLI
AVLLIKSVYTEMLKENKRMLAIFLVPKVPLVYQQAEVIRERTGYRVGHYCGEMGQDFWDA
RRWQREFESKQVLVMTAQILLNILRHSIIKMEAIHLLILDECHHAVKKHPYSLVMSEFYH
TTPKGKRPAVFGMTASPVNLKGVSSQEDCAIKIRNLESKLDSIVCTVKDRRELEKHVPMP
LEIVVQYDKAATLWSLHEQIKQMEVAVEEAAHSSSRRSKWQFMGARDAGSKEELRLVYGV
SERTESDGAANLIQKLRAINYALGELGQWCAYKVAYSFLTALQNDERANYQLDIKFQESY
LKKVVALLQCQLNEGAATNSDTKSVDVHNNDAQSIDEIEEGELPNSHAVSGGEHVDVIIG
AAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVAALVLPKVFTELPSLGFIKCAS
LIGHNNNQEMRSCQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY
IQSRGRARKPGSDYILMLERGNVSHETFLRNARNSEETLRKEAIERTDLSHLKGTPRLAT
VDTSLGSMYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHERPGGSTEY
SCKLQLPCNAPFEKLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGDEGEK
VEQNDEGDPLPGTARHREFYPEGVSDILRGEWILSGRDGCQNSETFQLYMYAVKCVNVGI
SKDPFLTQVSDFAVLFGNELDAEVLSTTMDLFVARTMITKASLVFQGPIRITETQLVLVK
SFHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVMAEKFPDPVKEIDWDMVENIVGTDAWK
NPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAYGQKAHPTYGIRGAVAQFDVVKAS
GLVPHRDTMVCMEDVYWSQGKLVMADSCIDIKDLVGKIVTAAHSGKRFYVDSVQDDMNAE
NSFPRKEGYLGPLEYSSYADYYRQKYGVELIHKKQPLIRGRGVSYCKNLLSPRFEHSEAR
EGESEENLDKTYYVFLPPELCLLHPLPGTLVRGAQRLPSIMRRVESMLLAVQLKDVINYP
VPAARILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV
SNMVLYQYALNKRLQFYIQADRFAPSRWAAPGVLPVFDEDIKESESSIFGEECPAAETEP
QKDFYDDDYEENIREDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMRW
IGIQVEFDPQELPCPKPHNIPESIMRSVDFDALEAALIIKFKDRGLLVEAITHASRPSSG
VSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVH
LRHGSSALEAQIRDFVKDVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDNGLD
TSIVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRTGNVATVEVFIDGV
QMGVAQNPQKKMAQKLAARNALVILKEKEKENASKKDTEKSGEKKNGVQIFTRQTLNDIC
LRRQWPMPQYRCVYEGGPAHAKRFVYAVRVNTSDRGWTDECIGEPMPNVKKAKDSAAVLL
LELLNRCYPDSK
NT seq 5799 nt   +upstreamnt  +downstreamnt
atggggggcgagcccacattgcccgggccggcgggcgctgggaacgccccggccaacggc
ggcggcgatccggcatcctactggttcgatgcctgcgaggacgacagcctcgccggcatc
gtcttctccgacttcgacccttcgatgctgccatccttcgatcagatggggggcgaggat
ggtttccttggagagatagatcggattctcgagagcgttaatggcgatccgagtgctccg
ttgcctgccgagacgaaagcgggccagaaggaggactcagttgccgccgccgcccccgaa
ggcggcgggggactgccggcgccggtggagaacgggtccaagagcagtaggagtgaggag
cgagtcggagtgggggaggagaagaagggtgtggatggcggggcgccgaagagagatggt
ggtgtgctgaatggcgattggaggtacggcaagagagcccgtttcggcgatcggatgatg
gagaggggacggtacagggatcccgtgtgtcggcggcggcctcgtgattgggaggatggt
gatcggaggaggagagagggggactggagtaggaagagggagcgggacggctcggaaagg
agggatagcagagatagggattggagggagagggacagcagagggtattgggagagggat
aaatcggggaaggtggtgttccgggtggggccatgggaggcggagctgaaccgagaggcg
aagaaggccaagcaggatggattggaggaggcgaggcggagccctgagaagagacaggaa
gagaacaaggagaagcccgcggaggagctggcaaggcagtaccagcttgatgtcctggag
caagccaaanagaagaacacgatagcttttttggaaaccggggctgggaagacactgatc
gcagtactcctcatcaagagcgtctacaccgaaatgctcaaagagaacaaaagaatgctg
gcaattttcttggtgccaaaggttccccttgtttaccagcaagcagaagttattcgagag
aggaccgggtatagagttgggcattattgtggtgagatgggccaagatttctgggatgcc
cggaggtggcagcgtgaatttgaatccaaacaggtgctggttatgacagctcaaattttg
ttgaacattctcaggcacagcataattaagatggaagctattcatcttctaattttggat
gagtgccatcatgctgtaaagaaacacccatattctttagtcatgtcagaattttatcat
actactccgaagggtaaaaggccggctgtctttggtatgacagcttctcctgtcaactta
aagggtgtttctagtcaggaggactgtgctatcaagattcggaatcttgaaagcaaatta
gattccatcgtctgtacggtaaaagatcgaagggagctggagaagcatgtcccaatgccc
ttggaaatagttgtgcagtatgataaagcagctaccttgtggtcccttcatgagcaaata
aaacaaatggaagtagcagttgaagaagctgcacattccagttctcggagaagcaagtgg
caatttatgggagccagagatgctggatcaaaagaagaattgcgcctggtttatggtgtt
tcggaaagaacagagagtgatggtgctgccaatttaattcagaagttgagggctataaat
tatgctttaggtgaactgggacaatggtgcgcatataaggttgcatattcctttttgaca
gccttgcagaatgatgaaagggcgaactaccagcttgatatcaagtttcaagaatcatat
cttaagaaggttgttgctttattgcaatgccagttaaatgagggagctgccaccaacagc
gatacaaaaagtgtagatgtacataataatgatgctcaaagcatagatgagattgaggag
ggagagttgccaaacagtcatgctgtctctggtggtgagcatgtagatgttataatagga
gctgctgtcgcagatgggaaagttactcctaaagtgcaggcattgattaaaatacttctg
aagtaccaacacacagaggatttccgtgcaatcatttttgtggagcgagttgttgctgca
ttggttcttcccaaggtcttcacggagcttccatctctcggttttatcaagtgtgcgagc
ttgattggacacaacaataaccaggaaatgcgttcatgccaaatgcaggacacaattgca
aaatttcgtgatggccgagtcactttattagtagctacaagtgttgctgaggaaggactt
gatattcgacagtgcaatgttgtcattcgctttgaccttgcaaaaactgttttagcctat
atccagtctagaggtcgtgcaaggaagcctggatctgactacatattgatgcttgagagg
gggaatgtgtcacatgaaacatttttgaggaatgctcgcaatagtgaagaaacgttgaga
aaagaagctatagaacgaactgatcttagtcatcttaagggtactccaaggctagctaca
gtcgatacatcactgggttccatgtaccaggtggaatcaactggtgctgttgtcagctta
aattctgctgttggactcatccatttttactgttcccaactaccaagcgacagatattca
atacttcgtccggagtttatcatggaacgacatgagaggccaggtggctcgactgagtat
tcctgcaagcttcagcttccttgcaatgctccatttgaaaagcttgaaggtcccatatgc
agttcaatgcgccttgcacaacaggctgtttgtttggctgcgtgtaagaaattacatgag
atgggggccttcactgacatgcttttgccagacaagggaagcggggatgaaggtgaaaaa
gttgaacagaatgacgagggagatcctcttcctggaacagcacgacatagagagttctat
cctgaaggtgtatcagacattctcaggggggaatggattttgtctgggagagatggttgc
cagaactccgaaacgtttcagttgtatatgtatgctgttaaatgtgttaatgttgggatt
tccaaggacccattcctaacacaagtttcagactttgcagtactttttggcaatgagctg
gatgcagaggttttatcgacgacgatggatctctttgttgctagaacaatgataacaaag
gcatctctcgttttccagggacccataaggattacagaaactcagctggttttagtgaag
agctttcatgtcagacttatgagtattgtgcttgatgttgatgttgatccctcaactact
ccatgggatcctgcaaaagcatatctctttgtccctgtgatggctgagaagtttcctgat
cctgtcaaagagattgactgggatatggttgagaacatagtaggtactgatgcgtggaaa
aatcctcttcagagggcaaggccagacgtatatcttggtactaatgagcgaacactcggc
ggggaccgaagggagtatggatttggaaaattacgtcatggcatggcttatggtcagaaa
gcccaccctacatatggaatcagaggggctgtggcgcaatttgatgttgtgaaagcctct
ggattggttcctcatcgagatactatggtgtgcatggaggatgtttattggagccaaggg
aaattggttatggcagattcttgtattgacattaaggatcttgttgggaagatcgtaact
gctgcacactcaggaaaaaggttctatgtggattctgtgcaggatgatatgaatgcagag
aattcattcccaaggaaggagggctatctaggacctttagagtacagctcatatgctgat
tactacaggcaaaagtatggagttgagttgattcataagaaacaacctcttatacgtgga
cgtggtgtttcatattgcaagaatctcctttcccctagatttgaacattctgaagcacgg
gaaggtgaatctgaagagaatctagacaaaacatactatgtatttttgcctcctgaactc
tgcctccttcatccacttcctggaaccctcgttcgtggtgctcagaggttgccttcaata
atgagaagggtggagagcatgctgcttgctgttcagctcaaggatgtgatcaattatcct
gttcctgctgccaggattttggaagccttgactgctgcttcatgtcaggagaccttctgc
tatgaaagagcggagctgttgggtgatgcatacctgaaatgggttgttagtagatttctt
ttccttaaatatcctcaaaagcatgagggtcagcttaccaggatgaggcaacagatggtg
agtaacatggtgctataccaatatgcactaaataaacgacttcagttctatatccaagcc
gatcgctttgctccgtccagatgggctgctcctggagttcttcctgtctttgatgaagat
ataaaggaatcagaatcctccatatttggtgaggaatgtcctgctgcagagactgagccg
caaaaggatttctatgatgatgattatgaagagaacatacgggaagatggtgagattgag
ggtgattccagctgctatagggttctctctagcaaaaccctagcagatgttgttgaagcg
ctgattggggtgtattatgttgaaggtgggaagaatgctgcaaaccacctaatgagatgg
attgggattcaggtggagttcgaccctcaagagcttccatgtccaaagccgcacaacata
ccagaaagcataatgaggagtgttgactttgatgcattagaagctgcactaattatcaag
tttaaagatagaggcctgttggtggaagccattacacatgcttcgaggccttcatctggt
gtttcttgttatcagcgacttgaatttgttggagatgctgtattggatcatctgatcaca
aggcacctgttcttcacatacaccgacttgcctcctggacgcctgaccgacttgcgagct
gctgctgtgaataatgagaactttgctcgtgttgcagtcaagcacaagttgcatgtgcac
cttcgtcatggatcaagtgccctagaggcacagatacgggactttgtgaaggatgttcaa
gatgaactgtcaaaaccaggcttcaactcatttggccttggagactgcaaggctcccaaa
gttcttggagacattgttgaatccattgcaggtgctatttttcttgacaacggactagac
acttcaatagtctggagggtcttccaaccactgctacatccaatggtcaccccggaaact
ctaccaatgcatccagtgagggaactccaagagcgttgtcagcaacaggcagagggctta
gaatacaaagcaacacgtacaggcaatgtagctacagtcgaagtcttcatcgatggggtt
cagatgggagtagctcagaacccacaaaagaagatggcacaaaaattggctgcaagaaat
gcacttgtgatcttgaaggaaaaggaaaaggagaatgcatcaaagaaggatacagagaaa
agtggagaaaagaagaatggtgttcagatcttcacaaggcaaacacttaatgacatctgc
ttaagaaggcagtggccaatgccccaatatcgatgtgtttatgaaggtggccctgcccat
gctaaaaggtttgtctatgcagtccgtgtaaatacatccgatcgtggctggactgatgag
tgcattggggagcctatgccaaatgtgaagaaggcaaaggactctgctgctgttctcctc
cttgagcttctcaaccgatgttatcctgatagtaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (51)   

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