KEGG   Phoenix dactylifera (date palm): 103720779Help
Entry
103720779         CDS       T03274                                 

Definition
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103720779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103720779
Enzymes [BR:pda01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     103720779
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Step II factors
    103720779
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HA2 OB_NTP_bind Helicase_C S1 DEAD AAA_22 AAA_19 T2SSE AAA_30 ABC_tran DUF2075 Sigma54_activ_2 Flavi_DEAD AAA_16 PhoH AAA_14
Motif
Other DBs
NCBI-GeneID: 103720779
NCBI-ProteinID: XP_008808919
UniProt: A0A2H3Z626
Position
Unknown
AA seq 1184 aa AA seqDB search
MAPAADDGLKKLEYLSLVSKICTELESHVGCGDKVLAEFITDLGRSSETVEEFDAKLKEN
GAEMPDYFVRTLLTIIHAIVPPKPKSAKPSSDQNQAKKRSSAFPALSCRDDPERAKELRR
EMERDAEMKAASEVRSRDDHRDRDRGQDRDRDRDRDRRRDRDRDREYRRERDRDGDRDRD
WDRHNRDRSHRRDRDRDRYDNSRAYDEEEEDGRDGRNPNLSSRRYADEPELYKVYKGRVS
RVMDTGCFVQLNDFRGKEGLVHVSQIANKRVANAKDAVKRDQEAFVKVISVSGQKLSLSM
RDVDQKTGKDLLPMRKNSEDEALRANPSSGNHGPVTRTGLSGITIVEEDENGPSRRPLKR
MSSPEKWEAKQLIASGVLDVREHPMFDDDADGLLYEEEGAEEELEIELNEDEPAFLQGQS
RFSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPM
PDTGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSIQEQRQSLPIYKLKKEL
IQAVHENQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEF
GCRLGEEVGYAIRFEDCTSPETVIKYMTDGMLLREILVDENLSQYSVVMLDEAHERTIHT
DVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPET
DYLDAALITVLQIHLTEPEGDILVFLTGQEEIDHACQCLYERMKGLGKNVPELIILPVYS
ALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGIDSL
IITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTVPEIQRINLGMTTLNMKA
MGINDLLSFDFMDPPSPQALISSMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLL
ASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA
KNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFH
SARKDPQEGYRTIVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLV
ELAPRFFKSADPTKLSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq 3555 nt NT seq  +upstreamnt  +downstreamnt
atggcgccggcggctgacgacggcctgaagaaactcgagtacctctctctcgtctccaaa
atctgcacggagctcgagtcccacgtcgggtgcggcgacaaggtcctcgccgagttcatc
accgatctcggccgcagttccgagacggtggaggagttcgacgccaagctcaaggagaac
ggcgccgagatgcccgactacttcgtccgcaccctcctcaccatcatccacgccatcgta
cccccaaagcccaagtccgccaagccctcctccgaccagaatcaagccaagaagaggtcc
tccgccttccccgccctctcctgccgcgacgaccccgaacgcgccaaggagctccgccgc
gagatggagcgtgacgccgagatgaaggccgcatctgaggtccgcagccgcgacgatcac
cgcgatcgtgatcgcggccaagatcgggatcgggaccgagaccgagaccggcgacgtgat
cgagatcgagatcgagagtataggcgagagagggatagagatggagatagagacagagac
tgggacagacataatagagataggagtcacagaagggatagagatagagataggtatgat
aattctagggcatatgacgaggaggaagaagatggcagggatgggagaaaccctaacctt
agtagtcggaggtatgcggacgagccggagctctataaggtgtataagggtagggtttcg
cgagtgatggatacggggtgctttgtccagttgaatgatttcagggggaaggagggtctg
gtccatgtttcccagattgcaaataaaagggtcgccaatgcaaaggatgcagtgaagcgc
gatcaagaagcattcgtgaaggtgatctcagtgtctgggcagaaacttagcctttccatg
agggatgtggaccagaaaaccggaaaagatctgcttccaatgaggaagaactcggaggat
gaggcattgagggcgaacccttcaagtggcaaccatgggccggtgacaaggactggcctt
tcgggcatcacgattgtggaggaggatgagaatggaccgtctcggcggccgttgaagagg
atgagctcaccagagaagtgggaggcgaagcagctgattgcttctggggttttggatgtc
agggagcatccaatgttcgatgacgatgccgatgggctgctgtatgaggaagagggagct
gaagaagagctggaaattgagcttaatgaggatgagcctgcattcttgcaagggcagagc
cggttctcaattgacatgtcccctgtcaagattttcaagaatcctgaaggttctttgagc
agggcggcagcactccagtcagctctcattaaggagaggagggaggtccgagagcagcag
cagaggacaatgcttgattccatcccgaaggatcttaaccgcccatgggaagaccctatg
ccagatacaggtgagaggcaccttgctcaggagctgaggggtgttggattgtcggcctat
gacatgcctgaatggaagaaagatgcatatggaaaggctttaactttcgggcagaggtca
aagctttcaatacaggagcaaaggcagagtcttccgatctataaactgaagaaagagctg
attcaagctgtgcatgaaaaccaggttctggtcgtcattggtgagaccggttcagggaag
acaacacaagtcactcaatatctggcggaggcaggttacacaacaaggggaaaaattggg
tgcacacagcctcgtagggtggcagcaatgtcggttgctaagagggtggcagaagaattc
gggtgccgtttgggagaagaagttggttatgctattaggtttgaggactgcactagtcca
gagacagtgatcaagtatatgacagatggtatgcttcttagggagatcttggtcgatgaa
aacctttcacagtactctgttgtcatgcttgatgaagctcatgagagaacaatccacact
gacgttctttttggtttgctaaaacagctagtgaagcgcaggcctgaccttcggttgata
gtcacttctgccacacttgatgcagaaaagttctctggttatttctttaactgcaatatt
ttcaccattccagggagaacatttccagtggagatactctacacgaagcagccagagact
gattacttagatgcagctctaatcactgttttgcagatccacttgacggaacccgagggt
gatattcttgtcttcttgactggccaagaggaaattgatcatgcttgtcagtgtctttat
gagagaatgaaaggtttaggaaagaatgttccagagttgattatcttgccagtatacagt
gctcttcctagtgaaatgcaatccaggatttttgaacctgcacctcctggaaagaggaaa
gtggttgtggctactaatattgccgaggcttctttgacaattgatgggatatattatgtt
gttgatcctggttttgcaaagcaaaatgtgtacaacccaaaacaaggcattgattcactg
atcatcactcccatctcgcaagcatcagccaagcagcgagctgggcgtgctgggcgtact
ggcccagggaagtgttaccgtctctacacagagagtgcctaccgcaatgaaatgtcaccc
accacagttcctgaaatccaaagaattaacctcgggatgacaacactaaatatgaaggcc
atggggattaatgacctcttgtcatttgattttatggacccgccatcacctcaagcactc
atatcttccatggaacaactatacagtcttggagcattggatgaagaggggcttctgacc
aaattgggtagaaaaatggctgaatttccactggaaccaccattatcaaaaatgcttctg
gccagtgtcgacctagggtgcagcgatgagattttgaccattatagcaatgattcagact
gggaatatcttctacaggccaagggagaagcaagcccaagcagatcagaaaagagccaag
ttctttcagccagaaggtgaccacttaacattacttgctgtatatgaggcttggaaggcc
aaaaatttttctgggccatggtgctttgagaacttcgtgcagtcacgttcccttcggagg
gcacaggatgtcagaaagcagcttcttactatcatggacaggtataaactggatgtcgtc
agtgccggtaaaaactttacaaagatacggaaggcaattactgcaggattcttcttccat
tctgctaggaaggacccccaggagggatatagaaccatagttgagaaccagccggtgtac
atccatccaagcagcgctttatttcagaggcagccagattgggtcatatatcatgagctg
gttatgacgacaaaagaatacatgagggaggtcacggtcatcgatcccaaatggttagta
gaattggcaccaagattttttaagtctgcagatcctacaaagttgagcaaaaggaagagg
caagagcgtatcgaaccactttatgacagataccatgaaccgaactcatggcgtttgagc
aaacgccgtgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (73)   

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