KEGG   Pseudoalteromonas espejiana: PESP_a0691
Entry
PESP_a0691        CDS       T04989                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
pea  Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:pea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pea03009]
    PESP_a0691 (srmB)
Enzymes [BR:pea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PESP_a0691 (srmB)
Ribosome biogenesis [BR:pea03009]
 Prokaryotic type
  rRNA helicases
   PESP_a0691 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase AAA_11 AAA_22 AAA_30 PhoH
Other DBs
NCBI-ProteinID: ASM48912
Position
I:complement(685968..687194)
AA seq 408 aa
MQFSEFDLDTKLLNAIDKMGYETPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAI
QYLMDFPRRDPGFARVLIMTPTRELAYQIHEQCELLAKGTHLKIGVVTGGINYGTHKEIF
ENNNDILIATPGRLMEYLETENFHAENVEMLILDEADRMLDMGFRKEMLRICDEAKNRRQ
CFLFSATLEGDSVELFAERILNDPALLEAESSRKEKAKIHQWVHLADDYHHKLELLVNTL
NGPDVSKAIVFVKTRERLETLIGELTNNGVKAAWLRGEMPQDKRMKAMENFHSGKTRILI
ATDVAARGIDVSDISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLVEAHDIGILYKV
ERYTEQKLKRRIIKGIEPQHKEAKPPAKKRKDPVKMKAKKKAKVKKKK
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgcaattttctgaatttgatcttgatacaaagctactcaacgccattgataaaatgggt
tatgaaacaccaaccagcattcaacaacaagctattcctgaggctttacaaggtcgcgac
attttagcgtcggcacctacaggcacaggtaaaacagcggcatttttaattccggcaatt
caatacttaatggattttccacgccgcgatcctggttttgctcgtgtgttaattatgacc
cctacgcgtgaactggcttatcaaattcatgaacaatgtgaactacttgctaaaggtact
caccttaaaattggtgtagtaaccggggggattaactacggtactcacaaagaaattttt
gaaaacaataatgacattttaatcgccacaccagggcgtttaatggaataccttgaaacc
gaaaatttccacgccgaaaacgtagaaatgctaattcttgatgaagccgaccgcatgtta
gacatgggctttagaaaagaaatgctacgtatatgtgatgaagctaaaaaccgtcgtcag
tgctttttattctcagccactcttgagggcgacagcgtagagttatttgcagagcgcatt
ttaaacgaccctgcattacttgaagcggaatcgtcacgtaaagaaaaagcaaaaattcac
cagtgggttcaccttgctgatgactaccaccacaaattagagcttttagtaaatacctta
aatggccctgacgtaagtaaagctattgtgtttgttaaaacccgtgagcgcctagaaaca
ctcattggtgagcttactaataatggtgtaaaagcagcatggctacgtggtgaaatgcca
caagacaaacgcatgaaagccatggaaaactttcacagtggtaaaactcgcatattaata
gcaaccgacgttgctgcacgtggcattgacgtttcagacattagccacgtaattaacttt
gatatgccacgcactgccgatgtatatgtacaccgcattggccgtactggccgtgctggt
aaaaaagggattgcaatatcgcttgttgaagcacacgacattggtattttatacaaagtt
gaacgctacacagagcaaaagcttaagcgccgtataattaaaggtattgagccacaacac
aaagaagctaagccaccagctaaaaagcgtaaagatccagtaaaaatgaaagccaagaaa
aaagcgaaggttaaaaagaaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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