#=GF ID Sigma54_activ_2
#=GF AC PF14532.9
#=GF DE Sigma-54 interaction domain
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF SE Jackhmmer:D1EI59
#=GF GA 25.00 25.00;
#=GF TC 25.00 25.00;
#=GF NC 24.90 24.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF CL CL0023
#=GF DR INTERPRO; IPR002078;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF SQ 1522
#=GS A0A545U1G5_9PROT/134-289 AC A0A545U1G5.1
#=GS A0A1H8MG25_9RHOB/297-456 AC A0A1H8MG25.1
#=GS A0A0P1IVG1_9RHOB/141-283 AC A0A0P1IVG1.1
#=GS A0A3D8YSB1_9BACL/142-286 AC A0A3D8YSB1.1
#=GS A0A384J2Z7_9ENTR/144-284 AC A0A384J2Z7.1
#=GS A0A4V5N0I4_9ACTN/122-255 AC A0A4V5N0I4.1
#=GS V7EPJ0_9RHOB/141-283 AC V7EPJ0.1
#=GS B1ZTM1_OPITP/145-296 AC B1ZTM1.1
#=GS W3ANH6_9FIRM/219-355 AC W3ANH6.1
#=GS A0A6I6IKK4_9RHOB/145-283 AC A0A6I6IKK4.1
#=GS Q6LNI3_PHOPR/144-289 AC Q6LNI3.1
#=GS A0A550KL08_9PROT/139-272 AC A0A550KL08.1
#=GS A0A1G8U4Y5_9RHOB/145-284 AC A0A1G8U4Y5.1
#=GS W1HPT9_KLEPN/143-283 AC W1HPT9.1
#=GS D7UVI1_LISGR/333-476 AC D7UVI1.1
#=GS A0A0D6TAT1_9RHOB/146-292 AC A0A0D6TAT1.1
#=GS A0A1M4UVA9_9CLOT/309-454 AC A0A1M4UVA9.1
#=GS A0A2S5JIL5_9RHOB/145-284 AC A0A2S5JIL5.1
#=GS A0A085TUY3_9RHOB/315-471 AC A0A085TUY3.1
#=GS A0A0P1G5P1_9RHOB/143-285 AC A0A0P1G5P1.1
#=GS A0A0P7EE64_9GAMM/139-307 AC A0A0P7EE64.1
#=GS A0A0C5W5C5_9GAMM/145-290 AC A0A0C5W5C5.1
#=GS A0A2V1IP10_9BACT/148-296 AC A0A2V1IP10.1
#=GS A0A4S3MAB2_9RHOB/145-284 AC A0A4S3MAB2.1
#=GS A0A037ZKZ7_9RHOB/144-284 AC A0A037ZKZ7.1
#=GS A0A095DPR3_9RHOB/142-284 AC A0A095DPR3.1
#=GS A0A0J1IME8_BACCI/248-393 AC A0A0J1IME8.1
#=GS A0A5K7YSW8_9DELT/130-290 AC A0A5K7YSW8.1
#=GS A0A6L9H8X5_9CLOT/344-499 AC A0A6L9H8X5.1
#=GS A0A095DN21_9RHOB/145-284 AC A0A095DN21.1
#=GS A0A251WUQ7_9RHOB/145-284 AC A0A251WUQ7.1
#=GS A0A1A9T194_9PROT/136-273 AC A0A1A9T194.1
#=GS A0A6M8SSS3_9NEIS/136-271 AC A0A6M8SSS3.1
#=GS W4HKN5_9RHOB/146-284 AC W4HKN5.1
#=GS A0A1I6GCQ2_9RHOB/143-285 AC A0A1I6GCQ2.1
#=GS A0A4Q3ZIH3_9RHOB/144-286 AC A0A4Q3ZIH3.1
#=GS A0A2T5BTB4_9RHOB/143-285 AC A0A2T5BTB4.1
#=GS V9XGK7_9NOCA/266-383 AC V9XGK7.1
#=GS A3SPX1_ROSNI/141-276 AC A3SPX1.1
#=GS A0A437KE68_9BACI/254-404 AC A0A437KE68.1
#=GS A0A4R5F0B2_9RHOB/145-284 AC A0A4R5F0B2.1
#=GS A0A4Q9G3Z3_9RHOB/146-292 AC A0A4Q9G3Z3.1
#=GS A0A2K9MF68_9RHOB/21-160 AC A0A2K9MF68.1
#=GS A4F1K0_9RHOB/145-284 AC A4F1K0.1
#=GS A0A6L6J502_9RHOB/146-292 AC A0A6L6J502.1
#=GS A0A6P0C9G8_9RHOB/145-284 AC A0A6P0C9G8.1
#=GS A0A254R4K1_9RHOB/144-286 AC A0A254R4K1.1
#=GS A1B9J9_PARDP/147-293 AC A1B9J9.1
#=GS A0A6J4F3B5_9PROT/143-288 AC A0A6J4F3B5.1
#=GS W4IRQ2_PLAFP/201-336 AC W4IRQ2.1
#=GS A0A2R8AWK7_9RHOB/143-285 AC A0A2R8AWK7.1
#=GS A0A317KY31_9BACI/304-446 AC A0A317KY31.1
#=GS A8LUE9_DINSH/329-462 AC A8LUE9.1
#=GS A0A4R1YV08_9RHOB/143-285 AC A0A4R1YV08.1
#=GS A0A1V4J0E0_9CLOT/231-375 AC A0A1V4J0E0.1
#=GS A0A135W3C1_9BACL/142-286 AC A0A135W3C1.1
#=GS A0A376BV12_9NEIS/136-273 AC A0A376BV12.1
#=GS A0A4Q7V1W1_9PSEU/339-485 AC A0A4Q7V1W1.1
#=GS A0A1P8UY00_9RHOB/146-284 AC A0A1P8UY00.1
#=GS A0A4U1J2C8_9DELT/34-169 AC A0A4U1J2C8.1
#=GS A0A5B8I6I5_9RHOB/145-287 AC A0A5B8I6I5.1
#=GS R8ARJ5_PLESH/146-291 AC R8ARJ5.1
#=GS Q3J2L2_RHOS4/142-284 AC Q3J2L2.1
#=GS A0A2T4V4Z0_9DELT/264-428 AC A0A2T4V4Z0.1
#=GS X7F5A0_9RHOB/331-461 AC X7F5A0.1
#=GS A0A1X6ZID5_9RHOB/147-287 AC A0A1X6ZID5.1
#=GS A0A0J9E3K4_9RHOB/141-283 AC A0A0J9E3K4.1
#=GS A0A0H4KSA1_9RHOB/327-467 AC A0A0H4KSA1.1
#=GS W0E870_9FIRM/167-300 AC W0E870.1
#=GS A0A0F6W595_9DELT/146-289 AC A0A0F6W595.1
#=GS A0A7C9K8F9_9RHOB/249-394 AC A0A7C9K8F9.1
#=GS A0A1B8I0Q8_9GAMM/143-288 AC A0A1B8I0Q8.1
#=GS A0A1Y5SB51_9RHOB/145-284 AC A0A1Y5SB51.1
#=GS A0A1D9BDV8_9NEIS/136-271 AC A0A1D9BDV8.1
#=GS A0A1Y1JI85_PLAGO/198-322 AC A0A1Y1JI85.1
#=GS T0T292_9PROT/328-478 AC T0T292.1
#=GS U5T396_9GAMM/353-485 AC U5T396.1
#=GS A0A640VTE6_9RHOB/141-283 AC A0A640VTE6.1
#=GS A0A255XIT1_9PROT/177-324 AC A0A255XIT1.1
#=GS K2IM55_9RHOB/239-385 AC K2IM55.1
#=GS A0A1G7W748_9RHOO/134-268 AC A0A1G7W748.1
#=GS A0A1I2X9Z5_9RHOB/147-293 AC A0A1I2X9Z5.1
#=GS A0A3A9C4M8_9BACT/355-505 AC A0A3A9C4M8.1
#=GS A0A1N7LM51_9RHOB/142-284 AC A0A1N7LM51.1
#=GS M9RHH9_9RHOB/140-282 AC M9RHH9.1
#=GS A0A1X6YKK3_9RHOB/144-286 AC A0A1X6YKK3.1
#=GS A0A1X7N7C9_9RHOB/167-311 AC A0A1X7N7C9.1
#=GS A0A1H5SDJ8_9RHOB/145-283 AC A0A1H5SDJ8.1
#=GS A0A238JHF8_9RHOB/305-463 AC A0A238JHF8.1
#=GS A0A6H9XRP6_9PROT/136-273 AC A0A6H9XRP6.1
#=GS A0A1I0EAW4_9RHOB/146-292 AC A0A1I0EAW4.1
#=GS A0A1H9VCN1_9RHOB/325-458 AC A0A1H9VCN1.1
#=GS A0A4U7N5Z8_9RHOB/141-283 AC A0A4U7N5Z8.1
#=GS A0A0B3RIF7_9RHOB/146-284 AC A0A0B3RIF7.1
#=GS A0A3L9Y4W6_9RHOB/143-285 AC A0A3L9Y4W6.1
#=GS A0A080M4X8_9PROT/134-268 AC A0A080M4X8.1
#=GS E1Z3W9_CHLVA/142-268 AC E1Z3W9.1
#=GS A0A142LH27_9PROT/136-273 AC A0A142LH27.1
#=GS A0A0L6TX54_9FIRM/313-461 AC A0A0L6TX54.1
#=GS R5B750_9BACE/136-288 AC R5B750.1
#=GS A0A4R3ME31_9RHIZ/134-274 AC A0A4R3ME31.1
#=GS A0A1V0Q286_9RHOB/248-393 AC A0A1V0Q286.1
#=GS A0A059NYZ6_9BACI/304-448 AC A0A059NYZ6.1
#=GS A0A0F7K445_9GAMM/9-156 AC A0A0F7K445.1
#=GS F0SHR8_RUBBR/381-525 AC F0SHR8.1
#=GS A0A196R2B1_9RHOB/142-284 AC A0A196R2B1.1
#=GS M3UUN4_9ACTN/305-440 AC M3UUN4.1
#=GS A0A1I1SZP3_9GAMM/130-287 AC A0A1I1SZP3.1
#=GS A0A0P1F4A9_THAGE/143-285 AC A0A0P1F4A9.1
#=GS L8J9B5_9GAMM/143-288 AC L8J9B5.1
#=GS A0A412LDU4_9FIRM/312-457 AC A0A412LDU4.1
#=GS A0A2K2TWC7_9CLOT/314-456 AC A0A2K2TWC7.1
#=GS A0A0L1JNS4_9RHOB/142-284 AC A0A0L1JNS4.1
#=GS A0A0F5VHA2_9GAMM/144-289 AC A0A0F5VHA2.1
#=GS A0A1I1X888_9RHOB/327-463 AC A0A1I1X888.1
#=GS K6D8T6_9BACI/310-456 AC K6D8T6.1
#=GS A0A0K0Y521_9RHOB/140-282 AC A0A0K0Y521.1
#=GS W4HFZ2_9RHOB/329-458 AC W4HFZ2.1
#=GS A0A4Y4CS80_ZOORA/135-269 AC A0A4Y4CS80.1
#=GS C6X8G9_METGS/136-273 AC C6X8G9.1
#=GS A0A1I1ZUF8_9RHOB/145-284 AC A0A1I1ZUF8.1
#=GS C3YX59_BRAFL/519-600 AC C3YX59.1
#=GS A0A5C5Z3I8_9BACT/163-310 AC A0A5C5Z3I8.1
#=GS D4ZDY2_SHEVD/144-289 AC D4ZDY2.1
#=GS A0A085BUU9_9RHOB/144-286 AC A0A085BUU9.1
#=GS A0A2V2LFQ6_9RHOB/325-464 AC A0A2V2LFQ6.1
#=GS A0A0R1R4C8_9LACO/305-428 AC A0A0R1R4C8.1
#=GS E1X3K6_HALMS/326-482 AC E1X3K6.1
#=GS Q9CKZ0_PASMU/143-283 AC Q9CKZ0.1
#=GS A0A4R5H0A9_9ALTE/15-152 AC A0A4R5H0A9.1
#=GS A0A074JUP2_9RHOB/145-287 AC A0A074JUP2.1
#=GS B4EW93_PROMH/146-291 AC B4EW93.1
#=GS A0A1G5SGL6_9PROT/136-273 AC A0A1G5SGL6.1
#=GS A0A0U5FSF3_9PROT/156-285 AC A0A0U5FSF3.1
#=GS A0A2U8GPG6_9RHOO/328-467 AC A0A2U8GPG6.1
#=GS A0A2A4CLF3_9RHOB/145-287 AC A0A2A4CLF3.1
#=GS A0A0L1I830_PLAFA/201-336 AC A0A0L1I830.1
#=GS A0A373N7I9_9FIRM/428-581 AC A0A373N7I9.1
#=GS A0A2U1JW93_9BACI/373-518 AC A0A2U1JW93.1
#=GS A0A518D8R5_9BACT/238-376 AC A0A518D8R5.1
#=GS A0A4Z0M3J2_9GAMM/477-632 AC A0A4Z0M3J2.1
#=GS A0A0B4BYB8_9RHOB/145-284 AC A0A0B4BYB8.1
#=GS A0A6B9YPE4_9BACT/31-176 AC A0A6B9YPE4.1
#=GS A0A4R2RN99_9FIRM/46-174 AC A0A4R2RN99.1
#=GS A0A0P1H065_9RHOB/142-284 AC A0A0P1H065.1
#=GS A0A1A8VX58_9APIC/282-407 AC A0A1A8VX58.1
#=GS A0A1K1LNI5_9PROT/136-273 AC A0A1K1LNI5.1
#=GS Q5F5Q1_NEIG1/136-271 AC Q5F5Q1.1
#=GS Q5F5Q1_NEIG1/136-271 DR PDB; 3CO5 B; 138-271;
#=GS Q5F5Q1_NEIG1/136-271 DR PDB; 3CO5 A; 137-271;
#=GS A0A2Y9BEG4_9FIRM/311-457 AC A0A2Y9BEG4.1
#=GS A0A149VZY1_9PROT/135-272 AC A0A149VZY1.1
#=GS A0A1M7FYX8_9PROT/136-273 AC A0A1M7FYX8.1
#=GS G8QWU1_SPHPG/324-468 AC G8QWU1.1
#=GS H2CLN4_9LEPT/136-280 AC H2CLN4.1
#=GS A0A0U1NIG4_9RHOB/141-283 AC A0A0U1NIG4.1
#=GS A0A1B0ZWA7_9RHOB/145-284 AC A0A1B0ZWA7.1
#=GS A0A438AMM4_9RHOB/144-286 AC A0A438AMM4.1
#=GS V9XGF8_9NOCA/324-458 AC V9XGF8.1
#=GS B3PEJ1_CELJU/180-305 AC B3PEJ1.1
#=GS A0A1G9E0L0_9RHOB/143-288 AC A0A1G9E0L0.1
#=GS A0A518DZQ5_9BACT/162-313 AC A0A518DZQ5.1
#=GS A0A222E5I0_9RHOB/143-285 AC A0A222E5I0.1
#=GS A0A3A9E579_9FIRM/311-455 AC A0A3A9E579.1
#=GS A0A0D6B3L1_RHOSU/145-287 AC A0A0D6B3L1.1
#=GS A0A1M4MZ71_9RHOB/141-283 AC A0A1M4MZ71.1
#=GS H6L571_SAPGL/12-157 AC H6L571.1
#=GS A0A2S9YG79_9DELT/38-139 AC A0A2S9YG79.1
#=GS A0A4R6XR86_9GAMM/139-269 AC A0A4R6XR86.1
#=GS F5S8E9_9NEIS/136-272 AC F5S8E9.1
#=GS S9R2H8_9RHOB/147-289 AC S9R2H8.1
#=GS A0A396PZY3_9CLOT/356-477 AC A0A396PZY3.1
#=GS A0A1I0P2X3_9RHOB/142-284 AC A0A1I0P2X3.1
#=GS D7DKZ3_METV0/136-275 AC D7DKZ3.1
#=GS A0A5S3PJG6_9RHOB/141-283 AC A0A5S3PJG6.1
#=GS A0A1N6HLP1_9RHOB/143-285 AC A0A1N6HLP1.1
#=GS A0A0A5GIN1_9BACI/309-456 AC A0A0A5GIN1.1
#=GS A0A2N5Y7P0_9GAMM/5-154 AC A0A2N5Y7P0.1
#=GS A0A1I1YMD5_9RHOB/145-283 AC A0A1I1YMD5.1
#=GS A0A0J0YPB4_9NEIS/136-273 AC A0A0J0YPB4.1
#=GS A0A163W0M0_9RHOB/329-461 AC A0A163W0M0.1
#=GS A0A1A8XTV6_9PROT/134-268 AC A0A1A8XTV6.1
#=GS A0A6M0QP90_9RHOB/140-282 AC A0A6M0QP90.1
#=GS A0A6B2XH20_9ACTN/314-442 AC A0A6B2XH20.1
#=GS Q12JE8_SHEDO/19-161 AC Q12JE8.1
#=GS A0A1Y5T7N5_9RHOB/147-286 AC A0A1Y5T7N5.1
#=GS A0A3Q9QQ06_9BACI/308-454 AC A0A3Q9QQ06.1
#=GS A0A178K190_9GAMM/144-289 AC A0A178K190.1
#=GS A0A511D7D5_9PSEU/332-475 AC A0A511D7D5.1
#=GS A0A1H9P7E5_9RHOB/144-286 AC A0A1H9P7E5.1
#=GS A0A1X4IXS6_9RHOB/141-283 AC A0A1X4IXS6.1
#=GS A0A378UL64_BERDE/136-272 AC A0A378UL64.1
#=GS S6AHB4_SULDS/136-273 AC S6AHB4.1
#=GS X7F2R4_9RHOB/134-274 AC X7F2R4.1
#=GS A0A1I0PQU0_9RHOB/145-284 AC A0A1I0PQU0.1
#=GS A0A290ZSD5_9RHOO/135-269 AC A0A290ZSD5.1
#=GS A0A385NJG1_9BACI/307-454 AC A0A385NJG1.1
#=GS N1ZIT3_9CLOT/311-458 AC N1ZIT3.1
#=GS A0A0D6T8I9_9RHOB/322-457 AC A0A0D6T8I9.1
#=GS A0A0B6SDH6_BURPL/152-301 AC A0A0B6SDH6.1
#=GS A0A0D0Q562_9RHOB/141-283 AC A0A0D0Q562.1
#=GS A0A1U7DF17_9RHOB/144-286 AC A0A1U7DF17.1
#=GS A0A1I5APH4_9PROT/136-273 AC A0A1I5APH4.1
#=GS A0A119CVR2_THIDE/137-274 AC A0A119CVR2.1
#=GS Q24WB5_DESHY/21-170 AC Q24WB5.1
#=GS A0A4Q5V7P2_9GAMM/182-316 AC A0A4Q5V7P2.1
#=GS A0A4Q3Z2I9_9RHOB/145-284 AC A0A4Q3Z2I9.1
#=GS A0A5C1E3M5_9RHOO/134-268 AC A0A5C1E3M5.1
#=GS A0A127VVJ8_SPOPS/142-286 AC A0A127VVJ8.1
#=GS A0A345RCJ0_9RHOB/146-285 AC A0A345RCJ0.1
#=GS F7NFB3_9FIRM/312-456 AC F7NFB3.1
#=GS A0A1G6NPX1_9BACL/305-426 AC A0A1G6NPX1.1
#=GS A0A3R9PGB1_9BACI/321-467 AC A0A3R9PGB1.1
#=GS A0A150KMH6_9BACI/149-288 AC A0A150KMH6.1
#=GS A0A7G3D3H6_9RHOB/141-283 AC A0A7G3D3H6.1
#=GS A0A4Y1YKW9_9PROT/137-274 AC A0A4Y1YKW9.1
#=GS A0A1G8HGY5_9RHOB/145-287 AC A0A1G8HGY5.1
#=GS A0A011NX29_9PROT/134-268 AC A0A011NX29.1
#=GS A0A1W6D117_9RHOB/143-285 AC A0A1W6D117.1
#=GS A0A1I0DHJ3_9RHOB/324-461 AC A0A1I0DHJ3.1
#=GS A0A0W7WP35_9RHOB/143-285 AC A0A0W7WP35.1
#=GS A0A239PNX8_9RHOB/147-293 AC A0A239PNX8.1
#=GS A0A4V1LSM8_9GAMM/11-164 AC A0A4V1LSM8.1
#=GS A0A0P7IHA7_9RHOB/145-284 AC A0A0P7IHA7.1
#=GS Q165P9_ROSDO/141-283 AC Q165P9.1
#=GS A0A1H3HDG2_9PROT/136-273 AC A0A1H3HDG2.1
#=GS A1SAN9_SHEAM/146-291 AC A1SAN9.1
#=GS A0A6N7ICA0_9ACTN/266-412 AC A0A6N7ICA0.1
#=GS C0ATG5_9GAMM/141-248 AC C0ATG5.1
#=GS A0A1H3K8S8_9PSEU/296-405 AC A0A1H3K8S8.1
#=GS A0A421BUF4_9RHOB/323-456 AC A0A421BUF4.1
#=GS A0A6C2YKV8_9BACT/161-309 AC A0A6C2YKV8.1
#=GS A0A2V4AR65_9PSEU/256-401 AC A0A2V4AR65.1
#=GS A0A377R2K4_9NEIS/136-273 AC A0A377R2K4.1
#=GS K2HAC1_9RHOB/139-281 AC K2HAC1.1
#=GS A0A2S0MU75_9RHOB/143-285 AC A0A2S0MU75.1
#=GS A0A1I4R3J5_9BACI/304-446 AC A0A1I4R3J5.1
#=GS A0A090R202_9GAMM/144-289 AC A0A090R202.1
#=GS A0A517SDG7_9PLAN/135-289 AC A0A517SDG7.1
#=GS F9UAZ3_9GAMM/5-158 AC F9UAZ3.1
#=GS A0A0M6YNE9_9RHOB/145-277 AC A0A0M6YNE9.1
#=GS A0A1M4N0X3_9RHOB/145-283 AC A0A1M4N0X3.1
#=GS A0A2T4JMD8_9RHOB/142-284 AC A0A2T4JMD8.1
#=GS A0A7G3D4A3_9RHOB/145-284 AC A0A7G3D4A3.1
#=GS A0A3A3DLQ5_9RHOB/146-292 AC A0A3A3DLQ5.1
#=GS A0A511W037_9BACI/304-430 AC A0A511W037.1
#=GS A0A2G8RB69_9RHOB/143-285 AC A0A2G8RB69.1
#=GS A0A166R8R0_9RHOB/143-285 AC A0A166R8R0.1
#=GS A0A3N4UL76_9RHOB/144-286 AC A0A3N4UL76.1
#=GS A0A1B0ZLL9_9RHOB/143-285 AC A0A1B0ZLL9.1
#=GS A0A6M1MQD2_9RHOB/141-283 AC A0A6M1MQD2.1
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