#=GF ID End_N_terminal
#=GF AC PF12218.14
#=GF DE N terminal extension of bacteriophage endosialidase
#=GF AU Mistry J;0000-0003-2479-5322
#=GF AU Gavin OL;
#=GF SE pdb_1v0e
#=GF GA 26.30 26.30;
#=GF TC 26.30 26.30;
#=GF NC 26.20 26.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 81514348 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Repeat
#=GF CL CL0268
#=GF RN [1]
#=GF RM 15608653
#=GF RT Crystal structure of the polysialic acid-degrading endosialidase
#=GF RT of bacteriophage K1F.
#=GF RA Stummeyer K, Dickmanns A, Muhlenhoff M, Gerardy-Schahn R, Ficner
#=GF RA R;
#=GF RL Nat Struct Mol Biol. 2005;12:90-96.
#=GF DR INTERPRO; IPR024429;
#=GF DR SO; 0001068; polypeptide_repeat;
#=GF CC This domain family is found in bacteria and viruses, and is
#=GF CC approximately 70 amino acids in length. This domain is found in
#=GF CC the bacteriophage protein endosialidase. The two N-terminal
#=GF CC domains (this domain and the beta propeller) assemble in the
#=GF CC compact 'cap' whereas the C-terminal domain forms an extended
#=GF CC tail-like structure. The very N-terminal part of the 'cap'
#=GF CC region (residues 246 to 312) holds the only alpha-helix of the
#=GF CC protein and is presumably the residual part of the deleted
#=GF CC N-terminal head-binding domain. The endosialidase protein
#=GF CC complexes to form homotrimeric molecules.
#=GF SQ 32
#=GS A0A157STN0_9BORD/194-249 AC A0A157STN0.1
#=GS A0A385ISS1_9CAUD/176-242 AC A0A385ISS1.1
#=GS A0A1Q1PV35_9CAUD/167-233 AC A0A1Q1PV35.1
#=GS A0A1Q1PV10_9CAUD/167-233 AC A0A1Q1PV10.1
#=GS A0A7G9VZS9_9CAUD/167-233 AC A0A7G9VZS9.1
#=GS A5VW57_9CAUD/146-212 AC A5VW57.1
#=GS A0A0H2Z1F7_ECOK1/205-271 AC A0A0H2Z1F7.1
#=GS A0A485ATF1_KLUCR/205-263 AC A0A485ATF1.1
#=GS A0A7H0XC55_9CAUD/39-102 AC A0A7H0XC55.1
#=GS K7QLS1_9CAUD/76-142 AC K7QLS1.1
#=GS A0A7G9VZD1_9CAUD/167-233 AC A0A7G9VZD1.1
#=GS A0A5C4SWI5_9BACL/124-174 AC A0A5C4SWI5.1
#=GS A0A0A0RVE3_9CAUD/129-179 AC A0A0A0RVE3.1
#=GS D2XJ95_9CAUD/167-233 AC D2XJ95.1
#=GS A0A1Q1PUL8_9CAUD/167-233 AC A0A1Q1PUL8.1
#=GS A0A7W7YQ99_9BACT/12-52 AC A0A7W7YQ99.1
#=GS A0A0A0RUQ7_9CAUD/376-426 AC A0A0A0RUQ7.1
#=GS A0A5Q2EZV9_9CAUD/82-148 AC A0A5Q2EZV9.1
#=GS A0A0H2Z0X6_ECOK1/146-212 AC A0A0H2Z0X6.1
#=GS A0A1B1W279_9CAUD/158-224 AC A0A1B1W279.1
#=GS A0A8A6C6K0_9CAUD/205-271 AC A0A8A6C6K0.1
#=GS A0A1Q1PUD3_9CAUD/39-102 AC A0A1Q1PUD3.1
#=GS D2XJE4_9CAUD/167-233 AC D2XJE4.1
#=GS B7MGW6_ECO45/146-212 AC B7MGW6.1
#=GS FIBER_BPK1F/246-312 AC Q04830.4
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK A; 267-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E E; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F D; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E F; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVL A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F F; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVJ A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F E; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK B; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3JU4 A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E D; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E B; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F B; 246-312;
#=GS K4FBR8_9CAUD/39-102 AC K4FBR8.1
#=GS A0A6G6XMC1_9CAUD/73-139 AC A0A6G6XMC1.1
#=GS I7HXG2_9CAUD/76-142 AC I7HXG2.1
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ A; 99-142;
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ C; 102-142;
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ B; 105-142;
#=GS A0A5P8D2P2_9CAUD/246-312 AC A0A5P8D2P2.1
#=GS FIBER_BPK1E/39-102 AC P49714.1
#=GS Q9AZ46_9CAUD/39-102 AC Q9AZ46.1
#=GS A0A7G9W003_9CAUD/167-233 AC A0A7G9W003.1
A0A157STN0_9BORD/194-249 .AAGDGVSDDTV-FFAALEAGTSGQP.INL.LGRTFAVSALPNGNDYFNGAFV---VAGQ----------ymp...........
A0A385ISS1_9CAUD/176-242 .AKGDGLVDDTVALNNLLSAAPVGQK.ING.NGRTYKVSALPDISRFVNTRFVYERIPGQPLYYVSDEFV..............
A0A1Q1PV35_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASLNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A1Q1PV10_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A7G9VZS9_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A5VW57_9CAUD/146-212 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
A0A0H2Z1F7_ECOK1/205-271 .AVGDGINDDSTAISACLEASSPGYK.IDG.LGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A485ATF1_KLUCR/205-263 i-KGDGSTNDTAA-FSVLETTFSNLD.IDL.QGKTYFVDAIPSGNRYYNGQWL-----------------lpvrsctwpl....
A0A7H0XC55_9CAUD/39-102 .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
K7QLS1_9CAUD/76-142 .AVGDGATDDTNAITQLLAAMPDGWI.VDG.RNLTFKVTTLPDISKFKNAAFVYERIVGQPLTYVSEGFF..............
A0A7G9VZD1_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A5C4SWI5_9BACL/124-174 .AKGDGATDDTAAF-AALEALYQGQY.VDL.LGKTYNVDSIPGTNTYYNGKFI-----------------av............
A0A0A0RVE3_9CAUD/129-179 .AKGDGITDDSSAFA-LVESKYTNKI.IDL.QGFTYKVNALPFKNKYTNGKF------------------nvg...........
D2XJ95_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A1Q1PUL8_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A7W7YQ99_9BACT/12-52 v-KGDGVTDDRAALEAALRQ-SAGQP.VDG.EGLTYAV--------------------------------hgsvhvr.......
A0A0A0RUQ7_9CAUD/376-426 .AKGDGATNDTS-VFTTLENSFTDKI.IEL.NGKTYLVDSLPTKNKYVNGRFL-----------------vg............
A0A5Q2EZV9_9CAUD/82-148 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A0H2Z0X6_ECOK1/146-212 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
A0A1B1W279_9CAUD/158-224 .AKGDGVTDDTSALNGVLNAAPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYVSEEFV..............
A0A8A6C6K0_9CAUD/205-271 .AVGDGINDDSTAISACLEASSPGYK.IDG.LGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A1Q1PUD3_9CAUD/39-102 .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
D2XJE4_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
B7MGW6_ECO45/146-212 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
FIBER_BPK1F/246-312 .AKGDGVTDDTAALTSALNDTPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYASEEFV..............
#=GR FIBER_BPK1F/246-312 SS .---EEEEE-HHHHHHHHHHS-TTS-.EE-.TT-EEEESS---GGGEES-EEEE-SSTT--EEEE-BTSS..............
K4FBR8_9CAUD/39-102 .AKGDGVTNDNAAVVAAMAT---GKR.IDG.AGATYKVDALPDMERFYNTRFVWERVAGQPLYYVSQGFI..............
A0A6G6XMC1_9CAUD/73-139 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
I7HXG2_9CAUD/76-142 .AVGDGATDDTNAITQLLAAMPDGWI.IDG.RNLTFKVTTLPDISKFKNAAFVYERIVGQPLTYVSEGFF..............
#=GR I7HXG2_9CAUD/76-142 SS .XXXXXXXXXXXXXXXXXXXXXXXXX.EEE.CCEEEE-SS---GGGEBSEEEEEESSTTEEEEEE-BTSS..............
A0A5P8D2P2_9CAUD/246-312 .AKGDGITDDTAALTSALNDIPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYASEEFV..............
FIBER_BPK1E/39-102 .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
Q9AZ46_9CAUD/39-102 .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
A0A7G9W003_9CAUD/167-233 .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
#=GC SS_cons .XXXEEEEEXHHHHHHHHHHSXTTSX.EEE.CCEEEEESS---GGGEESEEEEEESSTTEEEEEE-BTSS..............
#=GC seq_cons .AhGDGlTDDTsAl.ssLuus.sGhh.IDG.pGhTYKVSsLPDlS+FhNutFVaERlsGQPLhYVu-sFh..............
//
