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Database: Pfam
Entry: End_N_terminal
LinkDB: End_N_terminal
Original site: End_N_terminal 
#=GF ID   End_N_terminal
#=GF AC   PF12218.14
#=GF DE   N terminal extension of bacteriophage endosialidase
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Gavin OL;
#=GF SE   pdb_1v0e
#=GF GA   26.30 26.30;
#=GF TC   26.30 26.30;
#=GF NC   26.20 26.00;
#=GF BM   hmmbuild  HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 81514348 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF CL   CL0268
#=GF RN   [1]
#=GF RM   15608653
#=GF RT   Crystal structure of the polysialic acid-degrading endosialidase
#=GF RT   of bacteriophage K1F.
#=GF RA   Stummeyer K, Dickmanns A, Muhlenhoff M, Gerardy-Schahn R, Ficner
#=GF RA   R;
#=GF RL   Nat Struct Mol Biol. 2005;12:90-96.
#=GF DR   INTERPRO; IPR024429;
#=GF DR   SO; 0001068; polypeptide_repeat;
#=GF CC   This domain family is found in bacteria and viruses, and is
#=GF CC   approximately 70 amino acids in length. This domain is found in
#=GF CC   the bacteriophage protein endosialidase. The two N-terminal
#=GF CC   domains (this domain and the beta propeller) assemble in the
#=GF CC   compact 'cap' whereas the C-terminal domain forms an extended
#=GF CC   tail-like structure. The very N-terminal part of the 'cap'
#=GF CC   region (residues 246 to 312) holds the only alpha-helix of the
#=GF CC   protein and is presumably the residual part of the deleted
#=GF CC   N-terminal head-binding domain. The endosialidase protein
#=GF CC   complexes to form homotrimeric molecules.
#=GF SQ   32
#=GS A0A157STN0_9BORD/194-249  AC A0A157STN0.1
#=GS A0A385ISS1_9CAUD/176-242  AC A0A385ISS1.1
#=GS A0A1Q1PV35_9CAUD/167-233  AC A0A1Q1PV35.1
#=GS A0A1Q1PV10_9CAUD/167-233  AC A0A1Q1PV10.1
#=GS A0A7G9VZS9_9CAUD/167-233  AC A0A7G9VZS9.1
#=GS A5VW57_9CAUD/146-212      AC A5VW57.1
#=GS A0A0H2Z1F7_ECOK1/205-271  AC A0A0H2Z1F7.1
#=GS A0A485ATF1_KLUCR/205-263  AC A0A485ATF1.1
#=GS A0A7H0XC55_9CAUD/39-102   AC A0A7H0XC55.1
#=GS K7QLS1_9CAUD/76-142       AC K7QLS1.1
#=GS A0A7G9VZD1_9CAUD/167-233  AC A0A7G9VZD1.1
#=GS A0A5C4SWI5_9BACL/124-174  AC A0A5C4SWI5.1
#=GS A0A0A0RVE3_9CAUD/129-179  AC A0A0A0RVE3.1
#=GS D2XJ95_9CAUD/167-233      AC D2XJ95.1
#=GS A0A1Q1PUL8_9CAUD/167-233  AC A0A1Q1PUL8.1
#=GS A0A7W7YQ99_9BACT/12-52    AC A0A7W7YQ99.1
#=GS A0A0A0RUQ7_9CAUD/376-426  AC A0A0A0RUQ7.1
#=GS A0A5Q2EZV9_9CAUD/82-148   AC A0A5Q2EZV9.1
#=GS A0A0H2Z0X6_ECOK1/146-212  AC A0A0H2Z0X6.1
#=GS A0A1B1W279_9CAUD/158-224  AC A0A1B1W279.1
#=GS A0A8A6C6K0_9CAUD/205-271  AC A0A8A6C6K0.1
#=GS A0A1Q1PUD3_9CAUD/39-102   AC A0A1Q1PUD3.1
#=GS D2XJE4_9CAUD/167-233      AC D2XJE4.1
#=GS B7MGW6_ECO45/146-212      AC B7MGW6.1
#=GS FIBER_BPK1F/246-312       AC Q04830.4
#=GS FIBER_BPK1F/246-312       DR PDB; 3GVK A; 267-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E E; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F D; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E F; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E A; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F C; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 3GVL A; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F F; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E C; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 3GVJ A; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F E; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 3GVK B; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 3JU4 A; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E D; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F A; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0E B; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 3GVK C; 246-312;
#=GS FIBER_BPK1F/246-312       DR PDB; 1V0F B; 246-312;
#=GS K4FBR8_9CAUD/39-102       AC K4FBR8.1
#=GS A0A6G6XMC1_9CAUD/73-139   AC A0A6G6XMC1.1
#=GS I7HXG2_9CAUD/76-142       AC I7HXG2.1
#=GS I7HXG2_9CAUD/76-142       DR PDB; 4HIZ A; 99-142;
#=GS I7HXG2_9CAUD/76-142       DR PDB; 4HIZ C; 102-142;
#=GS I7HXG2_9CAUD/76-142       DR PDB; 4HIZ B; 105-142;
#=GS A0A5P8D2P2_9CAUD/246-312  AC A0A5P8D2P2.1
#=GS FIBER_BPK1E/39-102        AC P49714.1
#=GS Q9AZ46_9CAUD/39-102       AC Q9AZ46.1
#=GS A0A7G9W003_9CAUD/167-233  AC A0A7G9W003.1
A0A157STN0_9BORD/194-249             .AAGDGVSDDTV-FFAALEAGTSGQP.INL.LGRTFAVSALPNGNDYFNGAFV---VAGQ----------ymp...........
A0A385ISS1_9CAUD/176-242             .AKGDGLVDDTVALNNLLSAAPVGQK.ING.NGRTYKVSALPDISRFVNTRFVYERIPGQPLYYVSDEFV..............
A0A1Q1PV35_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASLNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A1Q1PV10_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A7G9VZS9_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A5VW57_9CAUD/146-212                 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
A0A0H2Z1F7_ECOK1/205-271             .AVGDGINDDSTAISACLEASSPGYK.IDG.LGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A485ATF1_KLUCR/205-263             i-KGDGSTNDTAA-FSVLETTFSNLD.IDL.QGKTYFVDAIPSGNRYYNGQWL-----------------lpvrsctwpl....
A0A7H0XC55_9CAUD/39-102              .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
K7QLS1_9CAUD/76-142                  .AVGDGATDDTNAITQLLAAMPDGWI.VDG.RNLTFKVTTLPDISKFKNAAFVYERIVGQPLTYVSEGFF..............
A0A7G9VZD1_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A5C4SWI5_9BACL/124-174             .AKGDGATDDTAAF-AALEALYQGQY.VDL.LGKTYNVDSIPGTNTYYNGKFI-----------------av............
A0A0A0RVE3_9CAUD/129-179             .AKGDGITDDSSAFA-LVESKYTNKI.IDL.QGFTYKVNALPFKNKYTNGKF------------------nvg...........
D2XJ95_9CAUD/167-233                 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A1Q1PUL8_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A7W7YQ99_9BACT/12-52               v-KGDGVTDDRAALEAALRQ-SAGQP.VDG.EGLTYAV--------------------------------hgsvhvr.......
A0A0A0RUQ7_9CAUD/376-426             .AKGDGATNDTS-VFTTLENSFTDKI.IEL.NGKTYLVDSLPTKNKYVNGRFL-----------------vg............
A0A5Q2EZV9_9CAUD/82-148              .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A0H2Z0X6_ECOK1/146-212             .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
A0A1B1W279_9CAUD/158-224             .AKGDGVTDDTSALNGVLNAAPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYVSEEFV..............
A0A8A6C6K0_9CAUD/205-271             .AVGDGINDDSTAISACLEASSPGYK.IDG.LGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYASEDFI..............
A0A1Q1PUD3_9CAUD/39-102              .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
D2XJE4_9CAUD/167-233                 .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
B7MGW6_ECO45/146-212                 .AIGDGVHDDTSALSELLSVATGGEK.IDG.RGLTFKVSTLPDVSRFKNARFLFERIPGQPLFYVSEDFI..............
FIBER_BPK1F/246-312                  .AKGDGVTDDTAALTSALNDTPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYASEEFV..............
#=GR FIBER_BPK1F/246-312       SS    .---EEEEE-HHHHHHHHHHS-TTS-.EE-.TT-EEEESS---GGGEES-EEEE-SSTT--EEEE-BTSS..............
K4FBR8_9CAUD/39-102                  .AKGDGVTNDNAAVVAAMAT---GKR.IDG.AGATYKVDALPDMERFYNTRFVWERVAGQPLYYVSQGFI..............
A0A6G6XMC1_9CAUD/73-139              .AVGDGVTDDTQSIFNVLAASPNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
I7HXG2_9CAUD/76-142                  .AVGDGATDDTNAITQLLAAMPDGWI.IDG.RNLTFKVTTLPDISKFKNAAFVYERIVGQPLTYVSEGFF..............
#=GR I7HXG2_9CAUD/76-142       SS    .XXXXXXXXXXXXXXXXXXXXXXXXX.EEE.CCEEEE-SS---GGGEBSEEEEEESSTTEEEEEE-BTSS..............
A0A5P8D2P2_9CAUD/246-312             .AKGDGITDDTAALTSALNDIPVGQK.ING.NGKTYKVTSLPDISRFINTRFVYERIPGQPLYYASEEFV..............
FIBER_BPK1E/39-102                   .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
Q9AZ46_9CAUD/39-102                  .AKGDGKTNDQDAVNAAMAS---GKR.IDG.AGATYKVSSLPDMERFYNTRFVWERLAGQPLYYVSKGFI..............
A0A7G9W003_9CAUD/167-233             .AVGDGVTDDTQSIFNVLAASHNNWI.IDG.RGLTYKVSQLPDISKFKNAAFVYERVAGQPLTYVADGFF..............
#=GC SS_cons                         .XXXEEEEEXHHHHHHHHHHSXTTSX.EEE.CCEEEEESS---GGGEESEEEEEESSTTEEEEEE-BTSS..............
#=GC seq_cons                        .AhGDGlTDDTsAl.ssLuus.sGhh.IDG.pGhTYKVSsLPDlS+FhNutFVaERlsGQPLhYVu-sFh..............
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