#=GF ID End_N_terminal
#=GF AC PF12218.9
#=GF DE N terminal extension of bacteriophage endosialidase
#=GF AU Mistry J;0000-0003-2479-5322
#=GF AU Gavin OL;
#=GF SE pdb_1v0e
#=GF GA 26.30 26.30;
#=GF TC 26.30 26.30;
#=GF NC 26.20 26.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 15608653
#=GF RT Crystal structure of the polysialic acid-degrading endosialidase
#=GF RT of bacteriophage K1F.
#=GF RA Stummeyer K, Dickmanns A, Muhlenhoff M, Gerardy-Schahn R, Ficner
#=GF RA R;
#=GF RL Nat Struct Mol Biol. 2005;12:90-96.
#=GF DR INTERPRO; IPR024429;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This domain family is found in bacteria and viruses, and is
#=GF CC approximately 70 amino acids in length. This domain is found in
#=GF CC the bacteriophage protein endosialidase. The two N-terminal
#=GF CC domains (this domain and the beta propeller) assemble in the
#=GF CC compact 'cap' whereas the C-terminal domain forms an extended
#=GF CC tail-like structure. The very N-terminal part of the 'cap'
#=GF CC region (residues 246 to 312) holds the only alpha-helix of the
#=GF CC protein and is presumably the residual part of the deleted
#=GF CC N-terminal head-binding domain. The endosialidase protein
#=GF CC complexes to form homotrimeric molecules.
#=GF SQ 17
#=GS K7QLS1_9CAUD/76-142 AC K7QLS1.1
#=GS Q2WC58_BPK1E/39-102 AC Q2WC58.1
#=GS A0A1B1W279_9CAUD/158-224 AC A0A1B1W279.1
#=GS A0A1Q1PUL8_9CAUD/167-233 AC A0A1Q1PUL8.1
#=GS A0A0A0RVE3_9CAUD/129-179 AC A0A0A0RVE3.1
#=GS A0A1Q1PV10_9CAUD/167-233 AC A0A1Q1PV10.1
#=GS A0A385ISS1_9CAUD/176-242 AC A0A385ISS1.1
#=GS A0A1S6KVE9_9CAUD/246-312 AC A0A1S6KVE9.1
#=GS D2XJ95_9CAUD/167-233 AC D2XJ95.1
#=GS A5VW57_9CAUD/146-212 AC A5VW57.1
#=GS A0A1S1TL96_9RHIZ/131-182 AC A0A1S1TL96.1
#=GS A0A157STN0_9BORD/194-249 AC A0A157STN0.1
#=GS A0A1Q1PV35_9CAUD/167-233 AC A0A1Q1PV35.1
#=GS FIBER_BPK1F/246-312 AC Q04830.4
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E B; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3JU4 A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F E; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F B; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK B; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E E; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVK A; 267-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F F; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVL A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E F; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 3GVJ A; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F C; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E D; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0F D; 246-312;
#=GS FIBER_BPK1F/246-312 DR PDB; 1V0E A; 246-312;
#=GS A0A0A0RUQ7_9CAUD/376-426 AC A0A0A0RUQ7.1
#=GS A0A1T4XS31_9BACT/29-73 AC A0A1T4XS31.1
#=GS I7HXG2_9CAUD/76-142 AC I7HXG2.1
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ C; 102-142;
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ B; 105-142;
#=GS I7HXG2_9CAUD/76-142 DR PDB; 4HIZ A; 99-142;
K7QLS1_9CAUD/76-142 AVGDGATDDTNAITQLLAAMPD.GWI.VDG.RNLTFKVTTLP.DISKFKNAAFVYERIVGQPLTYVSEGFF..............
Q2WC58_BPK1E/39-102 AKGDGKTNDQDAVNAAMAS---.GKR.IDG.AGATYKVSSLP.DMERFYNTRFVWERLAGQPLYYVSKGFI..............
A0A1B1W279_9CAUD/158-224 AKGDGVTDDTSALNGVLNAAPV.GQK.ING.NGKTYKVTSLP.DISRFINTRFVYERIPGQPLYYVSEEFV..............
A0A1Q1PUL8_9CAUD/167-233 AVGDGVTDDTQSIFNVLAASPN.NWI.IDG.RGLTYKVSQLP.DISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A0A0RVE3_9CAUD/129-179 AKGDGITDDSSAFA-LVESKYT.NKI.IDL.QGFTYKVNALP.FKNKYTNGKF------------------nvg...........
A0A1Q1PV10_9CAUD/167-233 AVGDGVTDDTQSIFNVLAASPN.NWI.IDG.RGLTYKVSQLP.DISKFKNAAFVYERVAGQPLTYVADGFF..............
A0A385ISS1_9CAUD/176-242 AKGDGLVDDTVALNNLLSAAPV.GQK.ING.NGRTYKVSALP.DISRFVNTRFVYERIPGQPLYYVSDEFV..............
A0A1S6KVE9_9CAUD/246-312 AKGDGVTDDTAALTSALNDTPV.GQK.ING.NGKTYKVTSLP.DISRFINTRFVYERIPGQPLYYASEEFV..............
D2XJ95_9CAUD/167-233 AVGDGVTDDTQSIFNVLAASPN.NWI.IDG.RGLTYKVSQLP.DISKFKNAAFVYERVAGQPLTYVADGFF..............
A5VW57_9CAUD/146-212 AIGDGVHDDTSALSELLSVATG.GEK.IDG.RGLTFKVSTLP.DVSRFKNARFLFERIPGQPLFYVSEDFI..............
A0A1S1TL96_9RHIZ/131-182 AVGDGATDDSAAVTAALAS---.GYY.LEG.LGRTYNVSAAPtDFTKIRRAAF------------------kvgav.........
A0A157STN0_9BORD/194-249 AAGDGVSDDTV-FFAALEAGTS.GQP.INL.LGRTFAVSALP.NGNDYFNGAFV---VAGQ----------ymp...........
A0A1Q1PV35_9CAUD/167-233 AVGDGVTDDTQSIFNVLAASLN.NWI.IDG.RGLTYKVSQLP.DISKFKNAAFVYERVAGQPLTYVADGFF..............
FIBER_BPK1F/246-312 AKGDGVTDDTAALTSALNDTPV.GQK.ING.NGKTYKVTSLP.DISRFINTRFVYERIPGQPLYYASEEFV..............
#=GR FIBER_BPK1F/246-312 SS ---EEEEE-HHHHHHHHHHS-T.TS-.EE-.TT-EEEESS--.-GGGEES-EEEE-SSTT--EEEE-BTSS..............
A0A0A0RUQ7_9CAUD/376-426 AKGDGATNDTS-VFTTLENSFT.DKI.IEL.NGKTYLVDSLP.TKNKYVNGRFL-----------------vg............
A0A1T4XS31_9BACT/29-73 AVGDGVTDDRAAIEKALKD-AA.GTP.LDG.EGLTYAVQ---.----------------------------gtvsvsvdvd....
I7HXG2_9CAUD/76-142 AVGDGATDDTNAITQLLAAMPD.GWI.IDG.RNLTFKVTTLP.DISKFKNAAFVYERIVGQPLTYVSEGFF..............
#=GR I7HXG2_9CAUD/76-142 SS XXXXXXXXXXXXXXXXXXXXXX.X--.EEE.CCEEEE-SS--.-GGGEBSEEEEEESSTTEEEEEE-BTSS..............
#=GC SS_cons XXXEEEEEXHHHHHHHHHHSXT.TS-.EEE.CCEEEEESS--.-GGGEESEEEEEESSTTEEEEEE-BTSS..............
#=GC seq_cons AhGDGlTDDTsAltssLsusss.Ghh.I-G.pGhTYKVosLP.DlS+FhNutFVaERlsGQPLhYsu-tFh..............
//
