KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851624
Entry
109851624         CDS       T05003                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013  Nucleocytoplasmic transport
pgc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109851624
  09122 Translation
   03013 Nucleocytoplasmic transport
    109851624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109851624
   03041 Spliceosome [BR:pgc03041]
    109851624
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109851624
Spliceosome [BR:pgc03041]
 Complex C
  Other components
   EJC/TREX
    109851624
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109851624
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 IKI3 PROPPIN Cytochrom_D1 vWF_A
Other DBs
NCBI-GeneID: 109851624
NCBI-ProteinID: XP_020277463
Position
Unknown
AA seq 322 aa
MAVAASRVDELINYFKSHNKIREQQSHSAKVHSVGWSCDGKYLASGSFDKSVCIFSLCPD
RLKQETTFRGHGGSVDQLCWHAFSPELLSTASGDKTVRIWDTRVQKCTANISTKGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEIAWNKDSDTFYLTNGQGCVH
ILSYPELDLLHVIKAHPGTCICIEFDPTGKYFATGSADALVSLWDADELCCLRTFSRLEW
PVRTISFSFDGQLLAAASEDLVIDIGEVQTGEKITDISVEAATFTVAWHPKQYLLAYACD
DKDTYDRKRDAGSLKVFGFAND
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggttgccgcttcgcgggtagacgagttgataaattatttcaagtcgcacaacaag
atccgcgaacaacagagtcactcggcgaaggtgcacagtgtgggatggagctgcgacggc
aaatacctggcttccggatcattcgacaagtccgtttgcatattctctctatgtcccgat
cgcttgaaacaagaaacaacattcagaggtcacggaggtagtgtggatcaactgtgctgg
cacgctttctctccggagttgctgtccacagcaagcggcgacaagacagtcaggatctgg
gacacgagggtgcagaagtgcacggcgaacatcagcaccaaaggcgagaatatcaatata
tcgtggtctccggatggtaacacaatcgcagttgggaacaaagaggatcttgttaccttt
attgacgctcgtgtgatgaagatacgcgcggaagagcagttcaactttgaggtgaatgag
atagcgtggaacaaggattccgacacgttctatctgacaaacggtcagggttgtgtgcac
atactcagttacccggagctggacttgctgcatgtgatcaaagcgcatccgggaacgtgt
atatgcatagaattcgatccaactgggaaatatttcgcaaccggatcagcggacgcgtta
gtctctttgtgggacgcggacgagttgtgttgtctgaggacgttctcgcgactcgaatgg
ccagtgaggaccatttccttctcgtttgacggtcagttgttggcggccgcctccgaggac
ttggtcattgatatcggtgaggtgcagactggtgaaaaaatcaccgatatttccgtggaa
gcggcaacgttcactgttgcctggcatccgaaacaatatcttcttgcctacgcgtgcgac
gacaaagatacttacgatcgaaaacgagatgcgggtagtctaaaggtgttcggttttgcg
aacgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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