KEGG   Pseudomyrmex gracilis (graceful twig ant): 109859377
Entry
109859377         CDS       T05003                                 
Name
(RefSeq) DEAD-box helicase Dbp80-like
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013  Nucleocytoplasmic transport
pgc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109859377
   03015 mRNA surveillance pathway
    109859377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109859377
Enzymes [BR:pgc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109859377
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109859377
SSDB
Motif
Pfam: DEAD Helicase_C AAA_30
Other DBs
NCBI-GeneID: 109859377
NCBI-ProteinID: XP_020293190
Position
Unknown
AA seq 476 aa
MASTKVDWGQYADEQDKLVSKVGNITLDKPNSTNVPSPPTSDTKSDEEDQISLAEKSLLQ
KIIRKGLVETTKNIEVQRKDPNSPLYSVKTFDALHLKPELLKGVYAMGFNAPSRIQETAL
PTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDTTKDYPQVLCLSPTYELAIQTGEVAA
KMSRFCPEIKIKYAVRGEEMTRGSKITEHIIIGTPGKVLDWGQKFRFFDLSKISLFVLDE
ADVMISTQGHQDQCIRIHKLLPRTCQMLLFSATYTSEVMNFAEIIVTNPLIIRLLKEEES
LDNIRQYYIKCKNIDDKYTAITNIYGVITIGQAIIFCHTKKTASWLAEKMSKDGHAVAIL
SGDLTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQNRQADCETY
LHRIGRTGRFGKSGIAINLIDSPHAMQLCKDIEKHFGKKIHYLDAEDADEIEKIGA
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggcttcgactaaagttgactggggtcaatatgccgacgagcaggacaaactggtgtca
aaggtgggaaatataaccttggacaaaccaaattcaacaaatgttccttctccccccaca
agcgatactaagagcgacgaggaagaccaaatctcgctggcggaaaagtcgctgttacaa
aaaatcataaggaaaggattggtggagacaacaaaaaatatagaagttcaaagaaaagac
cccaattcccccttatacagcgtcaaaacattcgacgcgcttcatttgaaacctgaacta
cttaaaggagtctatgcaatggggtttaacgcaccttcaaggattcaagagactgctttg
cccactttactggccgatccaccacagaatatgattgcacagtctcagtctggtaccgga
aagacagctgcattcgtattagctatgctaagtcgggtagatacgacaaaggattatccg
caagtactttgtctgtctccgacttacgaattggccattcaaactggcgaagtagccgca
aaaatgtcacgcttctgtcccgaaataaaaataaaatatgccgtgaggggagaagaaatg
actcgtgggtcaaaaatcactgagcacattatcataggaacaccggggaaggtgttggat
tggggacaaaaatttaggtttttcgacttgagtaaaatatctctgtttgtgctcgatgaa
gctgacgtaatgatctccacccaaggtcatcaagatcaatgtattcgcattcacaagtta
cttccccgtacgtgtcaaatgttattgtttagtgcgacgtacacgtcagaagtgatgaac
ttcgcggaaattatagttactaatccactcataatacgactactaaaagaggaagaatca
ttggataacattcgacagtattatatcaaatgcaaaaatatagatgacaaatacaccgct
atcactaacatatacggtgtaatcacaattgggcaagcgataattttctgtcatacgaaa
aaaacagccagttggctggcggaaaaaatgtcgaaagacggccacgcagtggcgatactg
tccggtgacttgacggtagaacaaagaatttccgtattagatagattcagggcaggcctt
gaaaaagttctcatcactactaacgttttggcgagaggtattgacgtcgaacaagtgacg
atagtggttaacttcgatctgccgatggatcagaatcgacaagccgattgcgaaacatat
ttacacagaatcggaagaacaggtcgttttggcaaatcgggtattgctattaatttaatc
gactcgccgcacgcgatgcaattgtgcaaggacatagagaaacacttcggcaagaagata
cattacctcgacgcggaggacgcggacgagattgagaaaatcggcgcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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