KEGG   Pedobacter ginsengisoli: CPT03_14915
Entry
CPT03_14915       CDS       T05145                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CPT03_14915 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgs03400]
    CPT03_14915 (nth)
Enzymes [BR:pgs01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CPT03_14915 (nth)
DNA repair and recombination proteins [BR:pgs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CPT03_14915 (nth)
 Prokaryotic type
     CPT03_14915 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 DUF763 HHH_8 IMS_HHH
Other DBs
NCBI-ProteinID: ATP57671
UniProt: A0A2D1U7U8
Position
3623579..3624259
AA seq 226 aa
MLKKERYKLFVAHFSAKQPDAETELHYNNPFQLLIAVILSAQCTDKRINQVTPALFKRFP
DARSLADVTPDIVFDYIRSVSYPNNKAKHLVGMAKMLLNDFNNEVPSDVNDLQKMPGVGR
KTANVIASVIYNAPAMAVDTHVFRVANRIGLTTGKTPLTVEKDLVKNLPEETIHVAHHWL
ILHGRYICVARSPKCSICEITSFCKYYQNTNKITKIFSDSEPSIKK
NT seq 681 nt   +upstreamnt  +downstreamnt
atgctcaaaaaagaaagatataagctttttgtggcccatttttctgcaaagcaaccagat
gccgaaacagaattgcactacaacaatccatttcaattactgatagcagtaatcttatct
gctcagtgtactgataaaagaataaatcaggtaacacctgcattgtttaagcgctttccg
gatgccagatctttggctgatgttacacccgatattgttttcgattatatcagaagtgtt
agctacccgaataacaaggctaaacatttggttggtatggctaaaatgctgcttaacgac
tttaataacgaagtcccatctgatgtgaatgatttacagaaaatgcctggtgttggaaga
aaaacagcaaatgttatagcttctgttatctataatgcacccgctatggcggttgataca
cacgttttcagggttgcaaacaggattggattaactaccggaaaaactccactaactgta
gaaaaagacttagttaagaatttgcctgaagaaacaatacatgttgcacaccattggctg
atattgcatggcaggtatatatgtgtggcaagatctccaaagtgtagtatctgcgaaatc
acaagtttttgcaaatattatcaaaacacgaataaaataactaaaatatttagtgattca
gaaccctcaataaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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