KEGG   Pseudoalteromonas translucida TAC125: PSHAa3021
Entry
PSHAa3021         CDS       T00282                                 
Symbol
mnmE
Name
(GenBank) enzyme adding cmnm(5) to tRNA-s(2)U34, forming (with subsequent MnmG action) cmnm(5)s(2)U34-tRNA, an intermediate in mnm(5)s(2)U34-tRNA synthesis
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
pha  Pseudoalteromonas translucida TAC125
Brite
KEGG Orthology (KO) [BR:pha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pha03016]
    PSHAa3021 (mnmE)
Transfer RNA biogenesis [BR:pha03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PSHAa3021 (mnmE)
 Prokaryotic type
   Methyltransferases
    PSHAa3021 (mnmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N ABC_tran AIG1 AAA_28 Ras NACHT AAA_16 Arf AAA_29
Other DBs
NCBI-ProteinID: CAI88050
UniProt: Q3IK56
Position
I:complement(3210475..3211839)
AA seq 454 aa
MINQDTIAAQATAPGRGGVGIIRVSGSLAKSVAEKVVGKIPKVRYADYVPFKSLAGEQLD
QGIAIYFAGPNSFTGEDVLELQGHGGPVVLDMLLKEISKIEGVRLAKPGEFSERAFMNDK
LDLTQAEAIADLINATSEQAAKSALQSLQGEFSKHIETLVEKVIHLRMYVEAAIDFPDEE
IDFLSDGKVSGDLDAIIAQLNTVTDQAKQGSIMREGMRVVIAGRPNAGKSSLLNALAGRE
AAIVTEIAGTTRDVLREHIHIDGMPLHIIDTAGLRESPDLVEQIGIERAWDEINQADRVL
FMLDGTDTIDTDPHKIWPEFMAKLPVGLGVTVIRNKADLSGDVVGMDQNQQYPVISLSAK
NADGIELVREHLKACIGFDGATEGGFMARRRHLDALEHAAYHLDTGKAQLEMHIAGEILA
EELRLTQQYLNEITGEFTSDDLLGKIFSSFCIGK
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgatcaatcaagacacaattgcagcacaagcaacagcccccggacgtggtggtgttggt
attattcgcgtttcaggcagccttgctaaaagtgttgccgaaaaagtagtaggtaaaata
cctaaagttcgctacgccgattatgtgccatttaaaagccttgctggcgagcaacttgat
caaggtattgccatttactttgccggccctaactcattcactggtgaagatgtacttgaa
ctacaaggccacggcggtcctgtagtactggatatgttacttaaagaaattagtaaaata
gagggcgttcgtttagcaaagcctggggagttttctgaacgtgcatttatgaatgacaag
cttgatttaacacaagcagaagccatcgccgatttaattaatgcaacctcagagcaagcc
gctaaaagtgccctacagtctctccaaggtgaattttctaagcacatagaaacacttgta
gaaaaagtaattcacttgcgtatgtacgtagaagccgcaattgattttcccgatgaagaa
atcgattttttatctgacggtaaagtttctggcgatttagatgccattattgcccagctc
aatacggtaaccgatcaagctaagcaaggcagcataatgcgcgaaggtatgcgggttgtt
attgccggtcgccctaatgcgggtaaatcaagcttattaaatgcccttgctgggcgagaa
gccgctattgtaaccgaaattgccggcactacacgtgacgtactacgtgaacatatacat
atagatggcatgccactgcatattatagacacagcaggtctgcgtgaaagccctgattta
gtagaacaaataggtattgagcgcgcatgggatgaaataaaccaagccgaccgagtgctg
tttatgcttgatggaaccgacactattgatactgatccccataaaatttggccagaattt
atggctaaattacccgttggattaggggttacagtgattagaaataaagccgatttatcg
ggcgatgttgttggtatggatcaaaatcagcaatacccggtcatcagtttaagtgctaaa
aatgccgatggtattgagctggttcgcgagcatttaaaagcctgtattggttttgatggt
gcaacagaaggcggctttatggcacgtcgtcgccaccttgatgcgcttgagcatgcagcg
taccacttagatacaggtaaagctcagttagaaatgcatatagcgggcgaaatactcgcc
gaagaattgcgtttaacccagcaatatctaaacgaaattaccggtgaattcacctcagat
gacctacttggaaaaatatttagctcgttttgtattggtaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (59)   

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