KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102104239
Entry
102104239         CDS       T02921                                 
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:phi04040]
    102104239 (SCN8A)
Ion channels [BR:phi04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102104239 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel ATP-synt_B GPHH IQ
Other DBs
NCBI-GeneID: 102104239
NCBI-ProteinID: XP_005532871
Position
Unknown
AA seq 1977 aa
MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPVSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPTLRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRI
LPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDESSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRVQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPAA
SKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDREHKC
NT seq 5934 nt   +upstreamnt  +downstreamnt
atggcagcgcggctgctggcaccaccgggccccgagagttttaaacccttcactccggag
tctctggccaacatcgagaagcacatcgcggagctgaagaagaagcagcgctccaagcag
gacagcagccaccgcgatgacgacgaggacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctacggggacatccctaaagggctggttgctgtgcca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccaccggaatggtcaaagaat
gtggagtacacattcaccgggatttatacgtttgaatcactcgtgaaaatcatcgccaga
ggtttctgtatagatggcttcaccttcctgcgggatccctggaactggctggatttcagc
gtcatcatgatggcatatgtcacagagtttgtggaccttgggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgtaattccaggcttgaagaccatc
gtgggtgccctgatccagtctgtgaagaagctgtcggacgtgatgatcctgacagttttc
tgtctcagtgtcttcgccctcatcgggctccagctcttcatgggcaatttaaggaacaaa
tgtgtgatttggccaattaatgtcaacgagacctttctggataacggctccaggggcttc
gactgggaggaatacaccaacaatatgtcaaatttttacatcattcctggcgcccctgac
cctttgctctgtggtaacagctcagatgcagggcaatgcccagaggggtacacgtgcatg
aaggcgggacggaaccccaactacggctacacgagcttcgacaccttcagctgggctttt
ctggctttatttcgccttatgactcaggacttctgggaaaacttgtatcaattaacttta
cgagcggcaggaaaaacctacatgatcttctttgtgctggtgatcttcgtgggatccttc
tacctggtgaatctgattctggccgtggtggccatggcctacgaggagcagaaccaggcc
accctggaggaggcagagcagaaggaggcagaattcaaggccatgctggagcagttaaaa
aagcaacaggaagaagcacaggctgctgccatggtcacctcggcagggacggtctctgag
gatgccgtggaagatgacggaggggggaggatgtctcggagctcctcggagatttccaag
ctcagttccaagagtgccaaggagcgccggaacaggaggaagaagcggaaggacaaggag
ctgtcggaaggagacgagaagtgtgacaacgagaaggtgttcaagtcggaatcggaggat
ggcatgaggaggaaagcgttcaggctgccggataacaggctgggaaggaaattctccatc
atgaaccagtctctcctcagcatcccgggctcccctttcctctcccgccacaacagcaag
agcagcatcttcagctacaagggccgcttccgcgacccggtgtcggagaacgagtttgcg
gacgacgagcacagcacggtggaggagagcgagggcaggagggactcgctcttcatcccc
atccgcggccgcgaccggcgcagcagctacagcggctacagcggctacagccagggcagc
cgctcctcgcgcatcttccccacgctgcgccgcagcgtcaagaggaacagcaccgtggac
tgcaacggcgtcgtctcgctcatcggcgggccgccctccagcatgcccgggggtcgcatc
ctgcccgagggcaccaccgaaatcgaaatcaggaagaagcctggcgggtctctcttggtc
tccatggatcaggtgaacgcgtcctacggaaggaaggatcggaccaacagcgtcatgacc
gggctgaccaacaccctcgttgaggagctggaggagtcccagaggaagtgtcccccttgc
tggtacaaattcgccaacaccttcctgatctgggagtgccacccctactggatgaagctg
aaggagattgtgaatttaattgtcatggatccgttcgttgacctggccatcaccatctgc
atcgtgctgaacacgttgttcatggccatggagcaccaccccatgacccccgagttcgag
cacgtgctctccgtgggaaacctggttttcactgggattttcacagcagaaatgttcctc
aagctcattgcaatggatccatactattattttcaagaaggctggaacatctttgatggg
tttattgtctccctcagcttgatggagctgagtctggcggatgtggaagggctctccgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaaatcctggcccactctgaac
atgctgataaaaatcattggtaactcggtgggtgccttggggaatttgaccttggtgctg
gccatcatcgtgttcatcttcgccgtggtggggatgcagctctttggcaaaagctacaag
gagtgtgtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggagtggattgagaccatgtgg
gattgtatggaagtggcaggccaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctgttcttggccttgctgctgagctccttcagcgcc
gacaacctggcggccacggacgacgacggggagatgaacaacctgcagatctcggtgatc
cgcatcaagaagggcatcgcctggaccaaggccaaggtgcgcgagttcatgcaggctcac
ttcaagcagcgggaggcggacgaggtgaagcccctggacgagctgtacgacaagaaggtg
aactgcatcgccaaccacaccggcgccgacatcaacagggacatcgactaccagaagaac
ggcaacggcaccaccagcggcatcgggagcagcgtggagaagtacatcatcgacgaggac
cacatgtccttcatcaacaaccccaacctcaccgtccgcgtgcccatcgccgtgggcgag
tccgacttcgagaacctcaacacggaggatttcagcagcgacacggatcctgatggcagc
aaggagaaactggacgagagcagctcctctgagggcagcaccatcgatataaagcccgaa
gtggaagaagttcccgtggaggcaccggaggagtacctggaccccgatgcctgcttcact
gaaggttgcatgcagcgctgcaagtgttgtcaggtgaacattgaagaagggctggggaag
tcgtggtggaccttgaggaaaacttgtttcctaatcgtggagcacaactggtttgagact
ttcatcatcttcatgatcctcctgagcagcggggctttggcttttgaggatatttacatc
gagcagaggaaaaccatccggaccatcctggagtacgcagacaaagtcttcacctacatt
ttcatcctggagatgctgctcaagtggtgtgcctacggcttcgtcaagttcttcaccaac
gcctggtgctggctggatttcctcatcgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaaatcccttaggacactaagagccttgagg
cctttaagagcgttatcccgatttgaggggatgagggtggttgtcaacgccttggttggc
gctatcccttccattatgaatgtcttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgccgggaaatatcattactgctttaatgaaacagctgag
catcgctttgagatagatgttgttaacaacaagacagactgcgaagctctgatgcctccc
aactccacggagatccgctggaagaacgtgaaaattaactttgacaacgttggggcagga
tatctggctctgctgcaagtggctaccttcaagggctggatggacatcatgtacgcagcc
gttgattccagaaagcaagaagaacaacccaagtacgaggacaacatttacatgtacatt
tacttcgtcatcttcatcatcttcggttcctttttcaccctcaacttgttcatcggcgtc
atcatcgacaacttcaatcaacaaaagaaaaagtttggaggtcaagacattttcatgaca
gaagaacaaaagaaatactacaatgccatgaaaaaactgggctccaagaagcctcaaaaa
cccattccccgacctctgaaccgcgtccagggcgccgtcttcgacttcgtcacgcagcaa
gccttcgacatcgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acggacacgcagagcaagcagatggaggacatcctctactggatcaacttcgtcttcgtc
atcttcttcacctgcgagtgcgtgctgaagatgttcgccctgcgccactactacttcacc
atcggctggaacatcttcgacttcgtggttgtgattctgtccatcgtggggatgttcctg
gctgagatcatcgagaagtacttcgtgtcccccacgctgttccgagtcatccgcctggct
cgcatcggccgcatcctgcgcttgatcaagggagccaaggggatccgcacgctgcttttt
gccttaatgatgtccctgcccgccttgttcaacatcggcctcctgctcttcctggtcatg
ttcatcttctccatcttcggcatgtccaacttcgcctacgtcaagcacgaggccggcatc
gacgacatgttcaacttcgagaccttcggcaacagcatgatctgcttgttccagatcacc
acgtcggcgggctgggacgggctcctgctgcccatcctcaaccgcccgcccgactgcgac
ctggacaaggagcacccgggcagcggcttcaagggggactgcgggaacccctcggtgggg
atcttcttcttcgtcagttacatcatcatctccttcctcatcgtggtcaacatgtacatc
gccatcatcctggagaacttcagcgtggccacggaggagagcgccgacccgctgagcgag
gacgacttcgagacgttctacgagatctgggagaagttcgaccccgacgccacgcagttc
atcgagtacagcaagctggcggatttcgccgacgccctggagcacccgctgcgcgtcccc
aaacccaacaccatcgaactcatcgccatggacctgccgatggtgagcggggacaggatc
cactgcttggacatcctgtttgccttcaccaaacgcgtgctgggggacagcggggagctg
gatatcctgaggcagcagatggaggagaggttcgtggcttccaacccttccaaagtgtct
tacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtgtcggccgtggtgatc
cagagagcctacagggctcgtttggcgcgacgaggcttcatcagccggcgacctgccgcc
tccaaactggaaaacgggggagcaaacagggagaaaaaggaaggaaccccgtccacggcg
tcgctgccctcctacgacagcgtcaccaaacccgagaaggagaaacagcagcgggcggag
gaggggaggagagaaaaggcaaagagacaaaaagacagggaacacaagtgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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