KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102104961
Entry
102104961         CDS       T02921                                 
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
  KO
K05717  fibronectin 1
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510  Focal adhesion
phi04512  ECM-receptor interaction
phi04810  Regulation of actin cytoskeleton
phi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102104961 (FN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102104961 (FN1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102104961 (FN1)
   04810 Regulation of actin cytoskeleton
    102104961 (FN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phi04131]
    102104961 (FN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phi04147]
    102104961 (FN1)
   00536 Glycosaminoglycan binding proteins [BR:phi00536]
    102104961 (FN1)
   04990 Domain-containing proteins not elsewhere classified [BR:phi04990]
    102104961 (FN1)
Membrane trafficking [BR:phi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    102104961 (FN1)
Exosome [BR:phi04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   102104961 (FN1)
Glycosaminoglycan binding proteins [BR:phi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102104961 (FN1)
Domain-containing proteins not elsewhere classified [BR:phi04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   102104961 (FN1)
SSDB
Motif
Pfam: fn3 fn1 Pur_ac_phosph_N fn2 NDNF Interfer-bind fn3_2
Other DBs
NCBI-GeneID: 102104961
NCBI-ProteinID: XP_014113230
Position
Unknown
AA seq 2392 aa
MPGRTVWRLALLALCLGAAAAGGHRRGAGGKSRRQAQTQTTSLPQGTAAQGKQTCYDNGR
YYQINQQWERTYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKD
SMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEW
TCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTK
TSYRIGDNWSKKDNRGNLLQCVCTGNGRGEWKCERHTSLHTTSTGSGSPSITNVQTALYQ
PQPQQPQPQPYGQCITDNGVIYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGN
SDGEPCVLPFTYDGRTFYSCTTEGRTDGHFWCSTTSNFEQDRRYSFCTEQNVLVQTRGGN
SNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTND
GVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKR
HDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRGI
GEWHCQPLQTYPGSTGPVQVIITESTNQPNSHPIQWNAPERSHITQYILRWRPKNSGRQW
KEATIPGHRNSYTISGLKPGVIYEGQLISVQQYGHKEVTRFDFTTTSTTAVTSNTVSGET
TLLPPVVATSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSV
NIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIVISWSRPQ
APITGYRIVYVPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQ
QETTGVPRTDEVPSPRDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHGQRLP
ITRSAFAEVIDLIPGTTYLFKIFAVNQGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLV
LWTRPRAVITGYKLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKGDLQS
NRETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDS
GSIVISGLTPGVEYTYSLTVLMDGQERETPIIRRVTTPLAPPTSLRLKSNPDTGILIVSW
ERSTSPGISGYRVTTAPTDGQQGSTLEEVVGADQTTCTFENLSPGVEYNVSVYSVKDDQE
SVPISETITPAVPPPTDLRFTNVGPDTMRVTWTAPTSIVLSGFLVRYSPAKKEEDVAEVT
VSPSDNMVILTNLLPGTEYLVKVYSVSEQHESAPLYGIQKTGLDSPTGLDFSDITANSFT
VHWIAPRATITGYRIRYQPEQGGGRPKEDRVPPSRNSITLTNLLPGTEYVVSIIAVNGRE
ESLPLVGQQTTVSDVPRDLEVTPTSPTSLKISWDAPAVTVRYYRITYGETGGSSPVQEFT
VPGTVSTATITGIKPGVEYTITVYAVTGRGDSPASSKPVTVTYRTEIDTPSQMQVTDVQD
NSISIRWLPSASPVTGYRVTAVPKKGHGPTKTKNVPADQTQVTIEGLQPTVEYMVSVYAQ
NQNGESLPLVETAVTNIDRPKGLTFTEVDVDSIKIAWESPQGQVTRYRVTYSSPEDGIHE
LLPAPGGEEDTAELHGLRPGSEYTINIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQVTP
TSLTINWNAPNVRLTGYRVRVNPKEKTGPMKEINLSPDSTSAVVSGLMVATKYEVSVYAL
KDSLTSRPAQGVVTTLENVSPPRRPRVTDVTETTITITWRTKTETITGFLVEAVPAGGQN
PIQRTISPELRSYTITGLQPGTDYKIYLYTLNENARSSPVVLDASTAIDAPSNLRFLTTT
SNSLLATWQPPRAKITGYIIRYEKPGSPVKEVVPRPRPGTTEATITGLEPGTEYIIYIIA
VKNSQKSEPLVGRKRTDELPTLISRPHPNQPDILDVPSIDEGTPYLTNNRYDNGNGIQLP
GSSGHPQTVGHQGQQVFFEEHGYRRPGPTTATPLRPGSRQPLPSVDEAIEIPGYQVPIVV
EPSYPHSRGPPRNDSVGQEALSHTTISWRPLLESSEYIISCQPVSQDEDTLQFRVPGTSS
SATLKGLTRGATYNIIVEALKDHRRQKVLEEVVTVGNTVSEGLNQPADDTCFDTYTGSFY
SIGEEWERLSETGFKLWCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMS
CTCLGNGKGEFKCEPHETTCYDDGKMYHVGEQWQKEYFGAICSCTCYGGQQGWRCDNCRR
PSVEVAPEGSAGHTYTQFTQRYHQATNTNVNCPIECFMPLDVQADTQHPRGK
NT seq 7179 nt   +upstreamnt  +downstreamnt
atgccgggccgcaccgtgtggcggctggcgctgctcgccctctgcctgggggccgcggcg
gcggggggacatcgccgcggagccggcggcaagagccggcggcaggcgcagacccaaacc
acctcgctgccgcagggcaccgccgcgcagggaaagcagacctgctatgacaatggacgg
tactaccagataaaccagcagtgggagcgcacttacctgggaaacactctggtctgtacc
tgctacggtgggagccgagggttcaactgcgagagcaagcccgaacctgaagagacctgc
tttgacaaatacactggatccacttaccgagttggggagacctatgagcgccccaaggac
tccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccatt
gccaatcgctgccatgagggcggccagtcctacaagatcggcgatacgtggcgccggccc
catgagacgggcggctacatgctggagtgtgtgtgcctgggcaacggcaagggcgagtgg
acctgcaagcctgtggccgagcggtgctacgacaacacggccgggacgtcctacgtggtg
ggagagacctgggagaaaccctaccagggctggatgatggtggactgcacctgcctcggt
gagggcagcggccgcatcacctgcacctccagaaatcgctgcaatgaccacgacaccaag
acttcctacagaattggagacaactggagcaagaaggataaccgtgggaacttgctgcag
tgtgtctgcaccgggaatggcagaggcgaatggaagtgtgagagacacacgtccctgcac
actaccagcactggctctggctctcccagcatcacgaacgtgcagactgcgctgtaccag
ccccagccgcagcagccccagccccagccctacggccagtgcatcacggacaacggcgtc
atctactcggtgggcatgcagtggctcaagacacagggcagccagcaaatgctgtgcacc
tgcctgggcaacggagtcagctgccaggagatagctgtgacccaaacatatggtggcaat
tctgatggagagccctgtgttctgcctttcacctacgatggaaggactttctattcctgc
accaccgagggccgcacagatgggcacttctggtgcagcaccacttccaactttgagcag
gacaggagatactccttctgtactgagcagaatgttttggtccagacacgtggtggcaat
tccaatggtgctctgtgccacttccccttcctgtacaacaaccgcaactacactgactgt
acttctgagggacggagggacaacatgaagtggtgtggaaccactgagaactacgatgct
gaccagaagtttggcttctgccccatggctgcccatgaagaaatctgcacaaccaatgac
ggtgtcatgtaccgtgttggggaccagtgggataagcagcatgacatgggtcacatgatg
agatgtacttgtgtaggaaatggccgtggagaatggacctgcattgcctattcacagctc
agagaccagtgcatcgtggatggcatcacctatgacgtgaaccagaccttccacaagcgc
catgatgaggggcacatgctgaactgcacctgctttggccagggccggggcagatggaag
tgtgatcctgttgaccagtgccaggactcagaaacccgcaccttctatcaaattggagac
tcctgggagaagtatgtccatggggtcagataccagtgctattgctatggtcgtgggatt
ggagaatggcactgtcaacccctacagacttaccctgggtcaactggacctgttcaggtg
atcatcacagagagtacaaatcagccaaactcccaccccatccagtggaatgctcctgaa
cgatctcacatcactcagtacatcttgcgctggagaccgaaaaactcaggaaggcagtgg
aaggaagccaccatccctggccaccggaactcgtacaccatctcaggcctgaagcctggt
gtgatctatgaggggcagctcatcagtgtacagcagtacggccacaaagaagtcacccgc
ttcgattttaccacaaccagcaccacagcagtgacgagcaacactgtttcaggagagaca
actcttcttccccctgtggttgctacttcagaatccgtcactgaaatcacatccaacagc
tttgttgtctcctgggtttctgcttctgacactgtttctggattccgtgttgagtatgag
ctgagcgaggagggtgatgagccacagtaccttgatctaccaagcacagccacttctgtc
aacatccctgacttgcttcctggtcgcaagtatattgttaatgtctatcagatctctgaa
gaaggagagcagaatctgatcctctctacttcacagactacagctcctgatgcaccaccc
gaccacacagtggaaagtgtggatgacacatccattgtcatcagctggagcagaccacag
gctccaatcacaggctacaggattgtctacgtaccctctgtggaaggcagcagcacagag
ctcaacctgcccgacaccgccacctctgtgacactcagtgacctgatgccaggggttcag
tacaacatcagcatctatgcagtggaggaaaaccaggagagcacccctgtcttcatccag
caggaaaccactggggtcccacgcacagatgaggtgccctcccccagagacctgcagttt
gtggaggtttctgacatcaagatcaccatcatgtggaccccaccgcagagccaagtgtcg
ggctatcgggtggaggtgatccctgtcaaccgccccggccagcacggccagagactgccc
atcaccaggagcgcttttgctgaagtcattgacctgatcccaggaacaacctatctcttc
aagatctttgctgtaaaccagggcagggagagcaaacctttgactggagagcaaaccacc
aagctcgatgcccccaccaacctgcggttcctcaacaccacggagcactcggtgctggtg
ctgtggacgcggccccgggccgtgatcacgggctacaagctgacagcagggcccaccaga
ggagggcagccccgcacctacaacgtgggaccctcagccaccaagtacctgctcaggaac
ctgcagcctggcaccgagtacaccgtgtacctcgtggccgtcaaaggcgacctgcagagc
aacagagagaccggggtcttcaccacttatcagcctgctggctctgttcctccttttaac
acagaagtgactgagacctcaattgtcatcacctggacacctgccccaaggattggtttc
aagctgggagtgcgcccaagccagggaggagaggctcctcgggaggtgatctcggactcg
ggcagcatcgtgatctctgggctgactcctggtgtggaatacacctacagcctcacagtg
ctgatggatggccaggagagagagacccccatcatcaggagagtcaccacaccactggct
ccaccaaccagcctgcgcctgaaatccaatcctgacactggcatcctgatagtctcttgg
gagagaagcacatctccaggcatcagcgggtaccgcgtgaccactgctcccaccgatgga
cagcagggctctaccctggaggaggtggtgggtgcagatcagaccacctgcacctttgag
aacctcagccctggtgtggagtacaatgtcagtgtctactctgtcaaggatgaccaggag
agtgtccccatctcagaaaccatcacaccagctgtgcctcctcccactgatctgcgcttc
actaatgtggggcctgacaccatgagggtgacttggactgctccaacttccatcgtgctg
agcggtttcctggtgcgctactcccctgccaagaaggaggaggatgttgcagaggtgaca
gtctccccctctgacaacatggtcatcttaacaaacctgctccctggcactgaatatctg
gtgaaagtctacagcgtttctgagcagcatgagagcgcacctttgtatggaatccagaaa
acaggtcttgattcccccactggcctggacttctcggatataacggccaactccttcacg
gtgcactggatcgctccgcgtgccaccatcacgggctacaggatccgctaccagccggag
cagggcggcggccggcccaaggaggaccgtgtgcccccctccaggaactccatcaccctc
accaacctgctgccaggcactgagtacgtggtcagcatcatcgctgtcaacggcagggag
gagagcctgcccttggttggccagcaaacaacagtgtctgatgttccaagggacttggaa
gtcacccctaccagcccaaccagcctcaagatttcctgggatgctcctgcagtgacagtc
agatactaccggatcacttatggtgaaacaggtggaagcagcccagtacaggagttcaca
gtgcctggcaccgtgtctactgccaccatcactggcatcaagcctggtgttgaatacacc
atcactgtgtatgctgtaactggccgtggagacagccctgccagcagcaagccagtcact
gtcacctacagaacagaaatagacacaccatcccagatgcaagtcaccgatgtccaggac
aacagtatcagcatcagatggctcccttcagcatccccagtcacagggtaccgggtgact
gctgtccccaagaagggacatgggcccacaaaaacgaaaaatgtccctgcagatcaaacc
caagtgacaattgaaggtctgcagcccacagtggagtacatggtcagtgtctatgctcag
aatcagaacggggagagcctgcccttggttgagacagctgtcaccaacattgaccgccct
aaaggactaacattcactgaggtggatgttgattccatcaaaattgcttgggaaagccct
caggggcaagtcaccaggtacagggtgacctactcaagccctgaggatggaatccatgag
ctattgccggccccaggtggcgaagaagacactgctgagctgcatggcctcaggccaggt
tctgagtacactatcaatatcgttgccatttacgatgacatggagagcctgcccctcact
gggacccagtccacagcaattccacctccaacaaacctgaagtttactcaggtaactccc
accagtctcaccatcaactggaatgcacccaacgttcgcctcactggctacagggtcaga
gtgaaccccaaagaaaagactggtcctatgaaagaaatcaacctttctccagacagcaca
tctgcagtcgtgtctggcttgatggtggcaaccaagtacgaagtgagtgtgtatgccctg
aaggactccctgaccagcagaccagcccagggggtggtcacaacccttgaaaatgtgagt
ccccctcgcaggcccagggtgacagatgtcaccgagacaaccatcaccatcacctggagg
accaagactgagaccatcactggcttcctggtggaagccgtccctgcaggcggccagaac
cccattcagaggaccatcagccctgaactcaggagttacactatcactggcttgcagcca
ggcactgactacaagatctacctgtacactctgaatgagaatgcacgcagctccccggtg
gtcctggatgcctccactgctatcgatgctccttctaacctgcgcttccttacgaccacg
agcaactccctgctggccacctggcagcctccccgagccaagatcaccggctacatcatc
agatatgagaaacctggctcaccagtcaaggaggtcgtgcctcgcccccggcccggcacc
accgaggctaccattactggtttggaacctggcactgaatacatcatctacatcattgct
gtgaagaacagtcagaagagtgaaccactggttggcagaaaaaggacagatgagctgccc
acgttgattagcagaccacaccccaaccagcctgacatcctggatgtgccttccattgac
gaggggaccccttacctcacgaacaataggtatgacaatggcaatggtatccaacttcca
ggctcctctgggcatcctcagacagtagggcaccaggggcagcaagtcttctttgaggag
cacggctacaggcggcctgggcccaccacagccactcccctcaggccgggatccaggcag
cctctgcccagcgtggatgaagccatcgaaatcccggggtaccaggtgcccatcgtggtg
gagccctcgtacccgcactcccgcgggcccccgcgcaacgacagcgtggggcaggaagcc
ctttctcacaccaccatctcctggaggccactgctggagagctctgagtacatcatctcc
tgccagcccgtcagccaggacgaggacacgctgcagttcagggttcctggcacttcctct
agtgccacactcaagggtcttacaagaggggccacctacaacatcatagtggaagccctg
aaggatcaccggaggcagaaggtgctggaggaggtggtcacagttggcaatactgtgtct
gaaggattaaaccagccagctgacgacacctgctttgatacttacactggctccttctat
tccattggcgaggaatgggagcgcttatctgaaactggctttaagctctggtgccagtgt
ttaggctttggcagtggccatttcagatgtgactcttctaagtggtgccatgacaatgga
gttaactacaagattggggagaagtgggacaggcaaggggagaatggtcagatgatgagc
tgcacctgccttgggaatggaaaaggagaattcaagtgtgaacctcatgagaccacgtgc
tatgacgatgggaagatgtaccacgttggggagcagtggcagaaggagtactttggagcc
atctgctcctgcacttgttacggaggacagcagggctggcgctgtgacaactgccgcagg
cccagcgtggaggtggcccccgaaggctccgctggccacacctacacgcagttcacacag
aggtaccaccaggccaccaacaccaacgtcaactgccccattgagtgtttcatgccccta
gatgtacaggcagacacacaacatccacggggaaagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (67)   

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