KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102106323
Entry
102106323         CDS       T02921                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510  Focal adhesion
phi04512  ECM-receptor interaction
phi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102106323 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102106323 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102106323 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phi04147]
    102106323 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:phi00536]
    102106323 (COL4A5)
Exosome [BR:phi04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102106323 (COL4A5)
Glycosaminoglycan binding proteins [BR:phi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102106323 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102106323
NCBI-ProteinID: XP_014114235
Position
Unknown
AA seq 1662 aa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NT seq 4989 nt   +upstreamnt  +downstreamnt
atgtctttaaaggcttgccatggatgtacatctttatccaaatgtgattgcagtggtgtg
aaaggtgaaaagggcgaaaggggatttccaggcttggaaggacaaccaggtttgcctgga
tttccaggagcagaaggaccaccaggtccaagaggctcaaagggtgatgatggtcttcca
gggcctattggacccaaaggaatcaggggaccaccagggcttcccgggtttccaggaaca
ccaggacttcctggattgccaggacaagatgggccaccaggaccccagggtatcccagga
tgcaatggaacaaagggagaacgtggattcccaggcagtccaggttttcctggtttacaa
gggcctcctggaccccctggtctgccaggtatgaagggtgaagcaggtgaaataattaca
tccttgctgccaggacagaaaggtgacccaggatttccaggtcttccaggcatacctggc
ccaccaggctccatgggaataccaggtccaattggccctccagggcccccaggtttgacg
ggatctcctggtccaccagggctgccaggacccaagggtaatatgggtttgaatttccaa
ggacccaagggtgaaaaaggtgaacaaggtcttcagggacctccagggccaccaggacaa
attggagaacagaaaagaccaaatgacattgagtttcagaaaggagatcagggtattcca
ggtgatccaggcccaccaggacttcctgggccaccaggtcctcctggtcttcctggtggt
gtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagaggaaagcctggcaaagat
ggagaacctggtcagcctggtagggatggtttacctggtgggcctggcataaatggtgct
ccaggaagagatggagaaaagggtgaaaaaggtgacatgggtccccctggtcctcctgga
attgttattccaaggccaggcattggtgcaacagtgggaccaaaaggtagcaaaggattg
ccaggacttccaggagccaaaggagagcgtggattctctggtaggccaggcccacctggc
ttcccaggatctccagggatcactactgttggacctcccggcccacctggcttacctggt
gagagaggacagaagggagatccaggtttacctggtgtttctattcctgggcaaccagga
gttgagggaccacaaggacctccaggaccaccaggtcccccagggccacctgcaccatct
gttgctcctggtaaagagttatgtgagcaagggccaccaggtcctccaggaattcaagga
caacaaggttttacaggggaacgaggccaaaaaggtgatcgaggagacacatgcttcaac
tgcataggaactggagtaactggtcctcctggggagagaggaccaccaggacctccgggt
agtccaggttctcctggctttcctggaccaaaaggtgaaaagggtcttcctggattaact
ggccttgtagggccaccaggctttccaggcatcccaggtgctcctggtagacctggtcct
aaaggagacccaggggatgtcttgacttctccaagaatgaaaggtgacaaaggagaccct
ggcctcccaggacctccaggcctccctggcatagatggcactcctggacgagatggactg
ccaggtttgcctggccctaagggggaacctggtagtattgcattcaaaggagaaatgggt
attccaggtaaaccagggataccaggccttcctggagaaaaaggccttcctggacctcct
ggttttggtccacaaggctcacctggtgaaaagggcatccaaggtgtatccggccgtcca
gggcctcctggtgttccgggtccaaaaggtgaccctggccagactattacagaaccagga
gttcctggtccccctggtcctccaggaagaaatggtgatccaggtcttccaggagatcct
ggtcagccaggtcagcgtggtttacccggcatcccaggtgcaaagggagagccaggtatt
cctggtattggacttccaggtccaccaggcccaaagggtttcccagggactccaggccca
cctggagctccaggaactccaggtcaccctggtctggatggacctcctggaccacctggt
ctcccaggacagaagggagatcgtggatttggagttccaggaccacctgggcccccagga
cccccaggcataaaaggagttcaaggacctaaaggtgatcctggcttcccaggaaaccct
ggtctccctggccgagcaggctttgatggaacccctgggcccaaaggtgaccctggacca
agtggaccaccaggacttccaggcccaccaggcatccctggcattggtggtcaaggtcct
cctggatctccaggacctccaggtcctgttggccccccagggttgcaaggcattccaggg
gagaaaggggatccaggtcctccaggcttcgatattcctggccctccaggtgaccaagga
gctccgggatatccaggaccccctggaataccagggcctaagggttcacctgggccacct
ggcagggatggaatacctggatttccaggtgccaaaggtgagatgggcgtcatgggagct
cctggtcttccagggcctccaggaactcctggaagaaatggcctgcctggcttgaaaggt
aatagtggattacctggtccaccagggcctcctggaccaatggggcagaaaggcgtcaaa
ggtgaagcaggtctgccaggtccacccggaacaattgatcccaaacagctgggagcaaaa
ggagaaaaaggcgagccaggtgttccaggtattcctggtttatcaggccagaaaggttat
caaggtctcccaggtgacccaggcccaccaggacttcagggcccaccaggtgtgccagga
ttgccaggtaccaagggagatacggggcttcctgggcagccaggaccaacaggacctcca
ggattaaaaggagctatgggagagatgggccttccgggtgcgcctgggcttaaaggcagc
caaggagtagcaggacgtccggggcagcctgggcctgtgggatttcctggactgaaaggg
gagaaaggtgatcctggtctttcaagcattggtatccatggtccccctggaccaaaggga
gatcgtggcttgcctggatacccaggtagtccaggctctaaaggtatagctggaaatcct
ggtttgcctggattttcaggcagtccaggtgcaaaaggagaaccaggccttcctggattc
ccaggaacaccaggaattccaggaccaaaaggtattgagggccctccaggcactcctggc
ctgcctggaccacctggaccagtaggtgatattggtcatcctggtcctcctggtccttca
ggagaaaagggacaacctggtcgagatggtatccctggaccagcgggtcagaagggtgaa
ccaggtctaccaggttttgggcatccaggacccccaggactcccaggattgtcagggcaa
aaaggagaactggggttacctggcccaccaggaccccctggacttccaggtctgaaggga
gaaccaggtttccagggattccctggtctgcagggtccaccaggtccaccaggaatacca
gggccacctctggaaggtcctaagggtagccctggcccaccaggtgttccaggaaggcca
ggtccaccaggcccagaaggtccacgagggccaccaggcagtggaggacttaaaggagaa
aaagggaacccaggtccacctggtccagctggcctgattggtccaaagggagatcaagga
ccacctggacgccagggggatcctggtcgtccaggtctgaatggaatgaagggtgacccc
ggggttccaggcgttccaggattcccaggtatgaagggtcccactggacctgcaggacct
gctggcctcacaggcagccagggactgccgggcccaccaggtccaccaggtttaccaggt
accattggacgaagcattgttgtcaaaggtgatcctggttccccaggtcctccaggacag
cctgggtccaaagggccacctggattgccagggccacagggattgccaggtccaattggt
cttcctggtgacccagggagagatgggcttcctggttttgatggtccagcaggacgaaaa
ggagagagaggtcttccaggccaaccaggttcacgaggaatacaaggacctcctggtcct
gatggcttacaaggcccacctggtcctcctggcacaccttctcttgctcatggattcctt
ataactcggcacagccagaccagcgatacaccactatgcccacaggggacatcaagaatt
tatgatggattctctcttctatatgtgcaaggaaatgagagagcacacggccaggatttg
ggtactgctgggagctgtcttagacgtttcagcaccatgcccttcatgttctgcaacatc
aacaatgtttgtaactttgcatcaaggaatgactattcctactggctgtcaaccccggag
tcgatgccaatgagcatggagccactgactgggcaaagcatccagccattcattagccga
tgtgttgtgtgtgaagctcctgctatggtgatagctgtccacagtcagaccattcagatc
ccttcatgtcctccaggctgggactccctctggattggctactctttcatgatgcacacg
agtgctggagcagagggctctggacaggccttggcatcgcctggatcctgtttggaagaa
ttccgctcagcaccgttcatcgaatgccatggtcggggcacctgtaattattatgccaat
tcatacagtttctggctggcaactgttgaggtctcagaaatgttcagcaaacctcagtca
gagacactgaaagctggagacttgaggacacgtattagtcgttgtcaagtttgcatgaag
aagacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (67)   

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